Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021418 Sechium edule HOM05D001128 ORTHO05D000721 6.2e-157 557.4 272 100.0
ClCG11G006470 Citrullus lanatus HOM05D001128 ORTHO05D000721 4.4e-62 242.3 282 49.3
CsaV3_6G001520 Cucumis sativus L. HOM05D001128 ORTHO05D000721 6.4e-61 238.4 280 48.2
MELO3C008261.2 Cucumis melo HOM05D001128 ORTHO05D000721 8.6e-50 201.4 234 49.1
Sed0016661 Sechium edule HOM05D001128 ORTHO05D000721 6.6e-42 175.3 280 45.7
QL08p062120 Quercus lobata HOM05D001128 ORTHO05D000721 1.7e-13 80.9 191 35.6
GSVIVG01016431001 Vitis vinifera HOM05D001128 ORTHO05D000721 2.9e-13 80.1 196 35.2
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 1.1e-12 78.2 192 33.3
FAN10G3504 Fragaria x ananassa HOM05D001128 ORTHO05D000721 2.4e-12 77.0 199 32.2
Cfa001394 Carpinus fangiana HOM05D001128 ORTHO05D000721 9.3e-12 75.1 194 30.9
Cpa.g.sc56.66 Carica papaya HOM05D001128 ORTHO05D000721 1.6e-11 74.3 161 37.3
FvH4_7g23630 Fragaria vesca HOM05D001128 ORTHO05D000721 1.6e-11 74.3 200 30.5
Haze_17155 Corylus avellana HOM05D001128 ORTHO05D000721 2.1e-11 73.9 194 30.4
Manes.07G123000 Manihot esculenta HOM05D001128 ORTHO05D000721 2.1e-11 73.9 195 30.3
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 3.5e-11 73.2 218 31.7
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 3.5e-11 73.2 206 32.0
Prupe.2G243200 Prunus persica HOM05D001128 ORTHO05D000721 4.6e-11 72.8 196 31.1
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 1.0e-10 71.6 190 32.1
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 1.3e-10 71.2 202 30.7
FAN01G1897 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.8e-10 70.9 200 29.5
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 3.0e-10 70.1 186 32.8
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 3.0e-10 70.1 178 32.0
TAR633G0212 Trochodendron aralioides HOM05D001128 ORTHO05D000721 1.5e-09 67.8 170 32.4
Glyma.14G063900 Glycine max HOM05D001128 ORTHO05D000721 2.5e-09 67.0 194 28.9
Potri.008G062200 Populus trichocarpa HOM05D001128 ORTHO05D000721 2.5e-09 67.0 183 29.5
Nn2g11296 Nelumbo nucifera HOM05D001128 ORTHO05D000721 3.3e-09 66.6 191 30.4
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 4.3e-09 66.2 114 36.8
MD01G1142200 Malus domestica HOM05D001128 ORTHO05D000721 4.3e-09 66.2 120 38.3
Thhalv10010589m.g Eutrema salsugineum HOM05D010817 ORTHO05D000721 5.6e-09 65.9 86 40.7
Glyma.02G252700 Glycine max HOM05D001128 ORTHO05D000721 5.6e-09 65.9 197 27.9
Lj3C959G13 Lonicera japonica HOM05D001128 ORTHO05D000721 5.6e-09 65.9 195 31.3
CDE04G0001 Ceratophyllum demersum HOM05D001128 ORTHO05D000721 2.1e-08 63.9 118 37.3
Nn2g13535 Nelumbo nucifera HOM05D001128 ORTHO05D000721 2.8e-08 63.5 182 28.6
FAN03G2145 Fragaria x ananassa HOM05D001128 ORTHO05D000721 3.7e-08 63.2 191 29.3
Lalb_Chr18g0052901 Lupinus albus HOM05D001128 ORTHO05D000721 3.7e-08 63.2 170 34.1
CANSAT56G3374 Cannabis sativa HOM05D001128 ORTHO05D000721 4.8e-08 62.8 124 33.9
Sabra10G0150300 Salix brachista HOM05D001128 ORTHO05D000721 6.2e-08 62.4 144 35.4
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 6.2e-08 62.4 177 30.5
Sopen10g034430 Solanum pennellii HOM05D001128 ORTHO05D000721 8.1e-08 62.0 104 36.5
CiPaw.09G202700 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.4e-07 61.2 198 28.8
Actinidia13814 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.8e-07 60.8 157 33.1
Lj1A945T19 Lonicera japonica HOM05D001128 ORTHO05D000721 1.8e-07 60.8 118 38.1
Ca_05916_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 2.4e-07 60.5 182 30.2
Duzib114G0703 Durio zibethinus HOM05D001128 ORTHO05D000721 2.4e-07 60.5 193 30.6
Ciclev10011799m.g Citrus clementina HOM05D001128 ORTHO05D000721 4.0e-07 59.7 170 30.0
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 4.0e-07 59.7 192 30.2
FAN06G2816 Fragaria x ananassa HOM05D001128 ORTHO05D000721 4.0e-07 59.7 151 31.1
Hma1.2p1_0671F.1_g200660 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 4.0e-07 59.7 110 34.5
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 5.3e-07 59.3 212 29.2
CSS0004370 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 5.3e-07 59.3 135 35.6
Actinidia29161 Actinidia chinensis HOM05D001128 ORTHO05D000721 6.9e-07 58.9 159 33.3
Sopen09g006510 Solanum pennellii HOM05D001128 ORTHO05D000721 6.9e-07 58.9 126 36.5
Ciclev10031729m.g Citrus clementina HOM05D001128 ORTHO05D000721 9.0e-07 58.5 161 34.8
FAN06G3577 Fragaria x ananassa HOM05D001128 ORTHO05D000721 9.0e-07 58.5 151 30.5
CiPaw.01G293700 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.2e-06 58.2 198 31.3
HanXRQChr10g0292031 Helianthus annuus HOM05D001128 ORTHO05D000721 1.2e-06 58.2 131 33.6
Duzib093G0147 Durio zibethinus HOM05D001128 ORTHO05D000721 2.0e-06 57.4 153 31.4
THA.LOC104810062 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 2.0e-06 57.4 49 57.1
ATR0210G013 Amborella trichopoda HOM05D001128 ORTHO05D000721 2.6e-06 57.0 143 32.9
Ca_17132_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 2.6e-06 57.0 156 30.8
Gohir.D10G238700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.6e-06 57.0 203 28.1
TAR369G0849 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.6e-06 57.0 173 30.6
TAR636G2726 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.6e-06 57.0 187 30.5
CSS0013156 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 3.4e-06 56.6 153 33.3
Manes.07G123100 Manihot esculenta HOM05D001128 ORTHO05D000721 3.4e-06 56.6 166 28.3
Oeu013161.1 Olea europaea HOM05D001128 ORTHO05D000721 3.4e-06 56.6 147 34.0
Solyc09g011690.4 Solanum lycopersicum HOM05D001128 ORTHO05D000721 3.4e-06 56.6 130 33.8
Gorai.011G274600 Gossypium raimondii HOM05D001128 ORTHO05D000721 4.5e-06 56.2 148 33.8
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 4.5e-06 56.2 140 35.7
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 5.8e-06 55.8 201 29.9
Dinv37107 Davidia involucrata HOM05D001128 ORTHO05D000721 5.8e-06 55.8 117 34.2
ECA247G0052 Erigeron canadensis HOM05D001128 ORTHO05D000721 5.8e-06 55.8 147 31.3
Solyc10g084970.2 Solanum lycopersicum HOM05D001128 ORTHO05D000721 5.8e-06 55.8 108 36.1
THA.LOC104809429 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 5.8e-06 55.8 53 50.9
CSS0030928 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 7.6e-06 55.5 153 32.7
COL.COLO4_14683 Corchorus olitorius HOM05D001128 ORTHO05D000721 7.6e-06 55.5 120 32.5
Gohir.A10G226400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 7.6e-06 55.5 208 29.8
Nitab4.5_0000008g0230 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.0e-05 55.1 155 31.6
Phvul.008G228300 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 1.0e-05 55.1 202 28.7


User provided reference genes

Program Settings