Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021373 Sechium edule HOM05D004231 ORTHO05D004814 7.8e-195 683.7 371 100.0
Sed0027682 Sechium edule HOM05D004231 ORTHO05D004814 1.1e-169 600.1 371 88.7
CsaV3_7G001970 Cucumis sativus L. HOM05D004231 ORTHO05D004814 8.1e-168 594.0 369 88.1
ClCG02G003360 Citrullus lanatus HOM05D004231 ORTHO05D004814 1.4e-167 593.2 369 88.1
MELO3C015708.2 Cucumis melo HOM05D004231 ORTHO05D004814 5.3e-167 591.3 369 87.8
CANSAT25G0301 Cannabis sativa HOM05D004231 ORTHO05D004814 1.2e-150 537.0 369 79.4
CiPaw.06G115200 Carya illinoinensis HOM05D004231 ORTHO05D004814 1.6e-147 526.6 365 79.7
MD10G1142000 Malus domestica HOM05D004231 ORTHO05D004814 6.1e-147 524.6 370 79.2
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 1.1e-145 520.4 375 78.7
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 1.5e-145 520.0 373 79.4
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 5.7e-145 518.1 375 78.4
Manes.01G017200 Manihot esculenta HOM05D004231 ORTHO05D004814 5.7e-145 518.1 369 77.2
QL05p043527 Quercus lobata HOM05D004231 ORTHO05D004814 2.8e-144 515.8 369 77.8
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 3.1e-143 512.3 375 78.1
Cfa005374 Carpinus fangiana HOM05D004231 ORTHO05D004814 9.0e-143 510.8 365 76.7
Potri.009G168400 Populus trichocarpa HOM05D004231 ORTHO05D004814 2.0e-142 509.6 373 76.4
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.6e-142 509.2 368 78.3
Dinv14175 Davidia involucrata HOM05D004231 ORTHO05D004814 7.7e-142 507.7 375 76.8
Potri.004G207000 Populus trichocarpa HOM05D004231 ORTHO05D004814 7.7e-142 507.7 372 76.6
Sabra04G0139300 Salix brachista HOM05D004231 ORTHO05D004814 7.7e-142 507.7 373 76.4
CiPaw.05G093400 Carya illinoinensis HOM05D004231 ORTHO05D004814 8.5e-141 504.2 359 77.4
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.5e-140 502.7 368 77.4
Duzib052G0175 Durio zibethinus HOM05D004231 ORTHO05D004814 2.1e-139 499.6 372 74.7
Sc08g0002160 Simmondsia chinensis HOM05D004231 ORTHO05D004814 2.7e-139 499.2 368 75.8
CSS0007201 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 3.0e-138 495.7 385 73.2
LjContig00081g0001175 Lotus japonicus HOM05D004231 ORTHO05D004814 3.9e-138 495.4 373 75.6
PGR042G2635 Punica granatum HOM05D004231 ORTHO05D004814 2.0e-137 493.0 372 72.6
Ciclev10028700m.g Citrus clementina HOM05D004231 ORTHO05D004814 4.3e-137 491.9 367 74.4
TPR.G18636 Trifolium pratense HOM05D004231 ORTHO05D004814 1.3e-136 490.3 333 79.6
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea HOM05D004231 ORTHO05D004814 3.7e-136 488.8 333 81.1
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea HOM05D004231 ORTHO05D004814 4.1e-135 485.3 339 79.4
TWI75G1214 Tripterygium wilfordii HOM05D004231 ORTHO05D004814 9.1e-135 484.2 377 71.6
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 2.0e-134 483.0 366 71.0
Ca_10777_v3 Cicer arietinum L. HOM05D004231 ORTHO05D004814 3.4e-134 482.3 332 78.9
Lsat_1_v5_gn_8_121420 Lactuca sativa HOM05D004231 ORTHO05D004814 4.5e-134 481.9 379 72.3
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 1.7e-133 479.9 362 75.4
Thecc.02G146400 Theobroma cacao HOM05D004231 ORTHO05D004814 2.2e-133 479.6 371 72.2
MSTRG.25000 Avicennia marina HOM05D004231 ORTHO05D004814 3.8e-133 478.8 363 75.2
ECA233G1094 Erigeron canadensis HOM05D004231 ORTHO05D004814 5.0e-133 478.4 381 71.4
Medtr5g099180 Medicago truncatula HOM05D004231 ORTHO05D004814 6.5e-133 478.0 373 73.2
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 8.5e-133 477.6 375 72.8
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 8.5e-133 477.6 375 72.8
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 1.1e-132 477.2 379 72.3
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla HOM05D004231 ORTHO05D004814 1.4e-132 476.9 380 71.3
SalBow7G0905 Salvia bowleyana HOM05D004231 ORTHO05D004814 4.2e-132 475.3 350 76.6
TPR.G5084 Trifolium pratense HOM05D004231 ORTHO05D004814 5.5e-132 474.9 333 78.1
Nitab4.5_0000783g0100 Nicotiana tabacum HOM05D004231 ORTHO05D004814 7.2e-132 474.6 344 77.6
EL10Ac9g21537 Beta vulgaris HOM05D004231 ORTHO05D004814 1.2e-131 473.8 374 72.2
Nn7g36283 Nelumbo nucifera HOM05D004231 ORTHO05D004814 1.2e-131 473.8 354 75.4
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 2.1e-131 473.0 356 71.6
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 3.6e-131 472.2 373 70.8
Nitab4.5_0008730g0040 Nicotiana tabacum HOM05D004231 ORTHO05D004814 4.7e-131 471.9 372 72.8
AL3G50130 Arabidopsis lyrata HOM05D004231 ORTHO05D004814 7.9e-131 471.1 373 71.8
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 7.9e-131 471.1 385 70.4
CARHR293610 Cardamine hirsuta HOM05D004231 ORTHO05D004814 1.0e-130 470.7 373 71.6
Nitab4.5_0000129g0030 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.0e-130 470.7 371 73.3
Sp3g30610 Schrenkiella parvula HOM05D004231 ORTHO05D004814 1.0e-130 470.7 373 71.8
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 1.4e-130 470.3 321 80.4
SGA_v2.0_scaffold172G39001 Striga asiatica HOM05D004231 ORTHO05D004814 1.4e-130 470.3 371 71.4
SGA_v2.0_scaffold36G14389 Striga asiatica HOM05D004231 ORTHO05D004814 2.3e-130 469.5 371 70.9
BcaB07g31737 Brassica carinata HOM05D004231 ORTHO05D004814 3.9e-130 468.8 374 71.1
Migut.N00847 Erythranthe guttata HOM05D004231 ORTHO05D004814 5.1e-130 468.4 334 76.3
AT2G17265 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 2.0e-129 466.5 373 70.8
Carub.0003s3121 Capsella rubella HOM05D004231 ORTHO05D004814 2.0e-129 466.5 373 71.3
Thhalv10022738m.g Eutrema salsugineum HOM05D004231 ORTHO05D004814 2.0e-129 466.5 373 71.3
Nn2g15251 Nelumbo nucifera HOM05D004231 ORTHO05D004814 2.0e-129 466.5 375 72.0
C07p06030 Brassica napus HOM05D004231 ORTHO05D004814 2.6e-129 466.1 373 71.0
C09p13290 Brassica napus HOM05D004231 ORTHO05D004814 2.6e-129 466.1 376 71.0
Actinidia17992 Actinidia chinensis HOM05D004231 ORTHO05D004814 4.4e-129 465.3 374 72.5
BolC9t54222H Brassica oleracea HOM05D004231 ORTHO05D004814 5.7e-129 464.9 376 70.7
BraA09t36767Z Brassica rapa HOM05D004231 ORTHO05D004814 7.4e-129 464.5 376 70.5
HanXRQChr16g0515121 Helianthus annuus HOM05D004231 ORTHO05D004814 7.4e-129 464.5 349 74.5
A07p03760 Brassica napus HOM05D004231 ORTHO05D004814 1.3e-128 463.8 373 70.5
BraA07t28164Z Brassica rapa HOM05D004231 ORTHO05D004814 1.3e-128 463.8 373 70.5
A09p11260 Brassica napus HOM05D004231 ORTHO05D004814 1.7e-128 463.4 376 70.2
BcaB03g16478 Brassica carinata HOM05D004231 ORTHO05D004814 2.8e-128 462.6 373 70.5
BolC7t41016H Brassica oleracea HOM05D004231 ORTHO05D004814 2.8e-128 462.6 373 70.5
BcaC04g22982 Brassica carinata HOM05D004231 ORTHO05D004814 3.7e-128 462.2 376 70.7
Aa31LG2G14870 Aethionema arabicum HOM05D004231 ORTHO05D004814 6.3e-128 461.5 373 71.3
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 6.3e-128 461.5 377 70.0
BcaB03g16474 Brassica carinata HOM05D004231 ORTHO05D004814 8.2e-128 461.1 375 70.9
AUR62013177 Chenopodium quinoa HOM05D004231 ORTHO05D004814 1.1e-127 460.7 370 69.7
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 2.4e-127 459.5 322 76.7
Phvul.008G292300 Phaseolus vulgaris HOM05D004231 ORTHO05D004814 2.4e-127 459.5 338 75.4
Cc11_g00240 Coffea canephora HOM05D004231 ORTHO05D004814 3.1e-127 459.1 360 73.3
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 3.1e-127 459.1 325 76.6
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 4.1e-127 458.8 376 69.1
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 9.1e-127 457.6 332 75.3
BcaC01g02941 Brassica carinata HOM05D004231 ORTHO05D004814 1.2e-126 457.2 371 70.9
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 1.2e-126 457.2 360 71.9
C03p58080 Brassica napus HOM05D004231 ORTHO05D004814 2.0e-126 456.4 365 72.1
BolC3t18081H Brassica oleracea HOM05D004231 ORTHO05D004814 2.0e-126 456.4 365 72.1
A06p34120 Brassica napus HOM05D004231 ORTHO05D004814 2.6e-126 456.1 362 71.8
BraA06t26345Z Brassica rapa HOM05D004231 ORTHO05D004814 3.5e-126 455.7 359 72.1
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 3.5e-126 455.7 376 70.5
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 1.7e-125 453.4 371 69.5
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 2.9e-125 452.6 369 69.4
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 1.5e-124 450.3 332 73.5
Peaxi162Scf00329g00312 Petunia axillaris HOM05D004231 ORTHO05D004814 1.5e-124 450.3 356 73.0
PSO675G1855 Papaver somniferum HOM05D004231 ORTHO05D004814 3.2e-124 449.1 331 75.2
PSO541G6356 Papaver somniferum HOM05D004231 ORTHO05D004814 7.2e-124 448.0 331 74.9
Carub.0007s0500 Capsella rubella HOM05D004231 ORTHO05D004814 2.3e-122 443.0 373 68.9
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 3.0e-122 442.6 371 67.7
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 5.2e-122 441.8 371 67.7
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 7.5e-121 438.0 339 72.9
Gohir.A03G170800 Gossypium hirsutum HOM05D004231 ORTHO05D004814 1.3e-120 437.2 371 67.1
Gorai.005G216700 Gossypium raimondii HOM05D004231 ORTHO05D004814 1.7e-120 436.8 371 66.8
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 2.8e-120 436.0 377 61.3
Gohir.D02G193900 Gossypium hirsutum HOM05D004231 ORTHO05D004814 3.7e-120 435.6 371 66.8
CDE05G1267 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 6.3e-120 434.9 369 65.9
CDE05G2018 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 5.3e-119 431.8 369 65.6
MBI18_g17319_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 4.0e-114 415.6 373 63.3
AUR62010176 Chenopodium quinoa HOM05D004231 ORTHO05D004814 1.5e-113 413.7 370 60.8
SHI25239 Sapria himalayana HOM05D004231 ORTHO05D004814 2.0e-113 413.3 364 64.3
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 3.4e-113 412.5 328 68.6
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 1.1e-111 407.5 374 63.1
GSVIVG01023624001 Vitis vinifera HOM05D004231 ORTHO05D004814 1.4e-106 390.6 365 63.8
BcaC06g36249 Brassica carinata HOM05D004231 ORTHO05D004814 2.7e-102 376.3 316 70.3
Cpa.g.sc60.14 Carica papaya HOM05D004231 ORTHO05D004814 1.5e-100 370.5 376 63.3
Pp3c5_14900 Physcomitrium patens HOM05D004231 ORTHO05D004814 1.2e-99 367.5 326 63.8
Mapoly0173s0009 Marchantia polymorpha HOM05D004231 ORTHO05D004814 3.0e-98 362.8 326 62.3
BcaB03g16477 Brassica carinata HOM05D004231 ORTHO05D004814 8.9e-98 361.3 298 70.1
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 1.5e-97 360.5 332 61.4
SMO351G0181 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 5.7e-97 358.6 337 62.6
Atru.chr5.3561 Acer truncatum HOM05D004231 ORTHO05D004814 2.1e-91 340.1 206 81.6
THA.LOC104807405 Tarenaya hassleriana HOM05D004231 ORTHO05D004814 1.4e-90 337.4 243 77.4
Lj9P408T30 Lonicera japonica HOM05D004231 ORTHO05D004814 3.1e-90 336.3 247 75.3
CARHR243620 Cardamine hirsuta HOM05D004231 ORTHO05D004814 7.5e-89 331.6 292 67.5
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 1.9e-87 327.0 370 53.8
COL.COLO4_34312 Corchorus olitorius HOM05D000109 ORTHO05D000520 2.4e-87 326.6 322 58.7
MBI10_g41732_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 4.4e-81 305.8 297 56.2
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 2.7e-78 296.6 323 55.1
MBI15_g18193_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 2.7e-78 296.6 322 55.3
ATR0810G109 Amborella trichopoda HOM05D004231 ORTHO05D004814 4.6e-78 295.8 330 55.5
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 2.5e-68 263.5 241 59.3
TAR625G1260 Trochodendron aralioides HOM05D004231 ORTHO05D004814 5.6e-60 235.7 209 62.2
Cre02.g082200 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 2.1e-51 207.2 208 54.8
Dinv20762 Davidia involucrata HOM05D004231 ORTHO05D004814 9.9e-49 198.4 130 79.2
SMO231G0001 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 1.1e-44 184.9 165 59.4
Atru.chr5.3560 Acer truncatum HOM05D004231 ORTHO05D004814 8.4e-40 168.7 143 62.2
Sabra09G0130700 Salix brachista HOM05D004231 ORTHO05D004814 6.7e-37 159.1 164 56.1
VMungo0331G0717 Vigna mungo HOM05D004231 ORTHO05D004814 5.3e-34 149.4 99 74.7
TAR625G0010 Trochodendron aralioides HOM05D004231 ORTHO05D004814 2.6e-33 147.1 90 76.7
VMungo0647G1050 Vigna mungo HOM05D004231 ORTHO05D004814 4.6e-30 136.3 95 72.6
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea HOM05D004231 ORTHO05D004814 1.8e-26 124.4 93 68.8
Actinidia26328 Actinidia chinensis HOM05D004231 ORTHO05D004814 3.1e-26 123.6 128 54.7
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 6.9e-26 122.5 127 55.1
QL03p013131 Quercus lobata HOM05D004231 ORTHO05D004814 4.5e-25 119.8 79 70.9
QL08p042586 Quercus lobata HOM05D004231 ORTHO05D004814 2.9e-24 117.1 131 52.7
BcaB08g34718 Brassica carinata HOM05D004231 ORTHO05D004814 3.8e-24 116.7 78 74.4
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 3.9e-21 106.7 103 56.3
BcaC06g34170 Brassica carinata HOM05D004231 ORTHO05D004814 1.2e-17 95.1 66 71.2
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.5e-17 94.7 283 30.0
BcaB08g34717 Brassica carinata HOM05D004231 ORTHO05D004814 2.6e-17 94.0 68 66.2
MCO14G367 Micromonas commoda HOM05D004231 ORTHO05D004814 1.2e-14 85.1 316 30.4
PRCOL_00006973 Prasinoderma coloniale HOM05D004231 ORTHO05D004814 3.3e-12 77.0 184 33.7
Lsat_1_v5_gn_2_1161 Lactuca sativa HOM05D004231 ORTHO05D004814 1.7e-11 74.7 56 66.1
FAN05G5401 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.4e-10 71.6 59 62.7
FAN07G1153 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.4e-10 70.9 54 66.7
AT4G35295 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 3.1e-10 70.5 62 62.9
FAN15G0284 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.6e-09 68.2 54 64.8
FAN05G3570 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.0e-09 67.8 54 66.7
TAR625G0853 Trochodendron aralioides HOM05D000369 ORTHO05D000253 2.0e-09 67.8 154 32.5
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 2.6e-09 67.4 43 76.7
FAN25G3338 Fragaria x ananassa HOM05D004231 ORTHO05D004814 7.7e-09 65.9 59 59.3
SEGI_37911 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 6.5e-08 62.8 49 59.2
Cre02.g082150 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 1.1e-07 62.0 47 61.7
FAN04G2646 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.1e-07 62.0 54 61.1
FAN23G0549 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.5e-07 61.6 76 50.0
FAN23G1162 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.5e-07 61.6 76 50.0
BolC7t43738H Brassica oleracea HOM05D004231 ORTHO05D004814 3.2e-07 60.5 69 50.7
C07p31950 Brassica napus HOM05D004231 ORTHO05D004814 9.4e-07 58.9 69 49.3
BcaB08g35109 Brassica carinata HOM05D004231 ORTHO05D004814 3.6e-06 57.0 84 45.2


User provided reference genes

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