Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 2.1e-171 605.5 291 100.0
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 4.0e-154 548.1 283 93.3
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 4.6e-150 534.6 290 88.6
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 1.3e-149 533.1 290 88.3
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 2.9e-144 515.4 319 79.9
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 2.0e-137 492.7 280 85.4
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 7.6e-137 490.7 280 85.0
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 7.6e-137 490.7 280 85.0
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 2.9e-136 488.8 273 86.1
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 1.9e-135 486.1 272 84.6
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 7.1e-135 484.2 280 83.9
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 9.3e-135 483.8 282 81.6
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 1.2e-134 483.4 283 81.6
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 2.1e-134 482.6 277 84.5
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 2.1e-134 482.6 280 81.4
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 3.5e-134 481.9 277 83.0
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 6.0e-134 481.1 273 83.2
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 6.0e-134 481.1 273 83.2
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 1.0e-133 480.3 273 83.2
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 1.3e-133 479.9 274 82.1
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 1.3e-133 479.9 271 83.4
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 1.8e-133 479.6 273 84.2
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 1.8e-133 479.6 280 81.8
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 8.7e-133 477.2 273 81.7
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 1.9e-132 476.1 271 83.0
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 1.9e-132 476.1 273 83.2
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 1.9e-132 476.1 281 81.9
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 3.3e-132 475.3 271 82.7
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 4.3e-132 474.9 285 77.9
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 5.6e-132 474.6 282 79.8
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 9.6e-132 473.8 283 78.8
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 1.6e-131 473.0 273 82.8
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 2.1e-131 472.6 273 82.1
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 2.1e-131 472.6 273 81.7
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 2.8e-131 472.2 273 81.0
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 1.8e-130 469.5 273 80.6
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 1.8e-130 469.5 273 81.0
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 1.8e-130 469.5 272 82.0
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 4.0e-130 468.4 272 81.2
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 6.9e-130 467.6 271 80.8
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 6.9e-130 467.6 282 80.5
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 9.0e-130 467.2 271 80.1
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 9.0e-130 467.2 282 80.5
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 1.2e-129 466.8 305 74.4
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 1.5e-129 466.5 272 80.9
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.0e-129 466.1 280 77.9
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 2.0e-129 466.1 264 84.1
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 3.4e-129 465.3 282 77.3
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 4.5e-129 464.9 273 78.8
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 5.8e-129 464.5 276 80.4
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 7.6e-129 464.2 272 80.9
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 1.3e-128 463.4 273 80.2
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 1.7e-128 463.0 282 77.0
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 4.9e-128 461.5 276 80.1
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 6.4e-128 461.1 294 78.6
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 7.1e-127 457.6 271 78.6
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 7.1e-127 457.6 271 78.6
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 9.3e-127 457.2 276 76.8
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 1.2e-126 456.8 306 73.2
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 2.1e-126 456.1 273 78.0
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 2.7e-126 455.7 280 76.8
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 4.6e-126 454.9 279 78.5
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 1.0e-125 453.8 273 81.0
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 1.3e-125 453.4 273 77.7
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 1.3e-125 453.4 269 78.8
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 3.0e-125 452.2 273 78.0
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 3.0e-125 452.2 278 79.1
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 3.9e-125 451.8 277 76.5
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 5.1e-125 451.4 280 75.7
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 5.1e-125 451.4 273 78.0
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 6.7e-125 451.1 273 79.1
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 6.7e-125 451.1 278 75.9
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 8.7e-125 450.7 273 77.3
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 1.5e-124 449.9 271 77.5
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.5e-124 449.9 275 76.7
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 4.3e-124 448.4 275 77.8
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 4.3e-124 448.4 281 76.5
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 1.6e-123 446.4 278 76.3
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 1.6e-123 446.4 292 74.3
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 2.1e-123 446.0 281 76.2
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 2.8e-123 445.7 260 82.3
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 3.7e-123 445.3 253 83.8
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 3.7e-123 445.3 280 76.1
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 8.2e-123 444.1 286 74.5
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.1e-122 443.7 280 75.7
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 1.8e-122 443.0 273 81.0
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 4.5e-121 438.3 271 75.6
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 1.3e-120 436.8 281 75.8
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.6e-118 429.9 313 69.0
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 3.0e-117 425.6 274 74.5
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 1.1e-116 423.7 282 71.6
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 1.5e-116 423.3 271 74.5
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 4.3e-116 421.8 275 76.0
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 5.7e-116 421.4 275 72.7
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 3.1e-114 415.6 280 70.4
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 1.2e-113 413.7 280 69.6
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 1.2e-113 413.7 273 71.1
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 2.0e-113 412.9 276 70.7
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 7.7e-113 411.0 275 70.5
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 1.0e-112 410.6 270 72.2
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 1.3e-112 410.2 274 71.9
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 6.5e-112 407.9 308 66.9
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 7.2e-111 404.4 234 83.8
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 1.2e-110 403.7 356 60.1
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 6.1e-110 401.4 277 71.8
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 1.8e-106 389.8 284 66.2
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 2.5e-103 379.4 218 83.0
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 9.4e-103 377.5 213 82.6
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 6.1e-102 374.8 274 67.2
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 6.1e-102 374.8 240 73.8
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.0e-96 357.5 275 60.0
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.4e-95 353.6 208 80.8
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 3.0e-93 345.9 291 62.2
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 3.0e-93 345.9 279 59.1
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 2.6e-92 342.8 191 85.3
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 4.8e-91 338.6 206 77.2
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 7.2e-87 324.7 272 58.1
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 8.0e-86 321.2 191 80.1
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 8.0e-86 321.2 191 80.1
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.2e-84 317.4 213 72.3
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 6.1e-78 295.0 270 53.7
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.6e-73 280.4 228 63.2
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 2.0e-73 280.0 226 61.1
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 7.8e-65 251.5 302 48.0
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.6e-62 243.8 156 78.2
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 3.1e-61 239.6 183 62.3
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 2.6e-60 236.5 152 73.7
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 1.1e-58 231.1 210 54.3
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 3.9e-56 222.6 262 47.7
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 7.5e-52 208.4 136 73.5
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 1.3e-43 181.0 191 47.6
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 1.1e-39 167.9 289 37.7
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.5e-39 167.5 98 77.6
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 9.6e-39 164.9 211 41.7
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 1.9e-26 124.0 91 62.6
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 2.7e-25 120.2 104 55.8
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 2.5e-15 87.0 66 60.6
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 4.0e-13 79.7 45 75.6
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 2.2e-11 73.9 45 73.3


User provided reference genes

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