Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021253 Sechium edule HOM05D005907 ORTHO05D007033 2.2e-67 258.8 129 100.0
Sed0019955 Sechium edule HOM05D005907 ORTHO05D007033 4.4e-36 154.8 119 62.2
CiPaw.11G074000 Carya illinoinensis HOM05D005907 ORTHO05D007033 8.8e-29 130.6 113 53.1
vmacro00100 Vaccinium macrocarpon HOM05D005907 ORTHO05D007033 9.8e-28 127.1 112 50.0
GSVIVG01036890001 Vitis vinifera HOM05D005907 ORTHO05D007033 1.7e-27 126.3 117 50.4
Cfa012308 Carpinus fangiana HOM05D005907 ORTHO05D007033 1.4e-26 123.2 118 50.8
Rhsim11G0037900 Rhododendron simsii HOM05D005907 ORTHO05D007033 1.4e-26 123.2 125 48.8
MSTRG.25750 Avicennia marina HOM05D005907 ORTHO05D007033 7.8e-25 117.5 117 44.4
TAR636G1547 Trochodendron aralioides HOM05D005907 ORTHO05D007033 7.8e-25 117.5 122 44.3
CSS0017808 Camellia sinensis var. sinensis HOM05D005907 ORTHO05D007033 1.0e-24 117.1 117 47.9
Actinidia01244 Actinidia chinensis HOM05D005907 ORTHO05D007033 2.3e-24 115.9 113 47.8
FAN04G3107 Fragaria x ananassa HOM05D005907 ORTHO05D007033 6.6e-24 114.4 126 46.8
FvH4_5g24980 Fragaria vesca HOM05D005907 ORTHO05D007033 8.6e-24 114.0 126 46.8
FAN18G3850 Fragaria x ananassa HOM05D005907 ORTHO05D007033 8.6e-24 114.0 126 46.8
Manes.15G184500 Manihot esculenta HOM05D005907 ORTHO05D007033 2.5e-23 112.5 114 45.6
PGR031G0343 Punica granatum HOM05D005907 ORTHO05D007033 3.3e-23 112.1 121 44.6
Ciclev10012886m.g Citrus clementina HOM05D005907 ORTHO05D007033 4.3e-23 111.7 119 42.9
RcHm_v2.0_Chr7g0215261 Rosa chinensis HOM05D005907 ORTHO05D007033 7.3e-23 110.9 119 47.1
Atru.chr8.2614 Acer truncatum HOM05D005907 ORTHO05D007033 9.5e-23 110.5 118 44.9
Nn3g19120 Nelumbo nucifera HOM05D005907 ORTHO05D007033 1.6e-22 109.8 119 43.7
CANSAT35G1964 Cannabis sativa HOM05D005907 ORTHO05D007033 2.8e-22 109.0 108 47.2
arahy.Tifrunner.gnm1.ann1.4G5U2W Arachis hypogaea HOM05D005907 ORTHO05D007033 3.6e-22 108.6 119 44.5
arahy.Tifrunner.gnm1.ann1.Y9HS7A Arachis hypogaea HOM05D005907 ORTHO05D007033 3.6e-22 108.6 119 44.5
TWI60G0533 Tripterygium wilfordii HOM05D005907 ORTHO05D007033 3.6e-22 108.6 111 47.7
Cc08_g05990 Coffea canephora HOM05D005907 ORTHO05D007033 6.1e-22 107.8 117 41.9
Potri.004G235000 Populus trichocarpa HOM05D005907 ORTHO05D007033 1.4e-21 106.7 113 45.1
A08p10440 Brassica napus HOM05D005907 ORTHO05D007033 1.8e-21 106.3 110 46.4
BraA08t33042Z Brassica rapa HOM05D005907 ORTHO05D007033 1.8e-21 106.3 110 46.4
COL.COLO4_16745 Corchorus olitorius HOM05D005907 ORTHO05D007033 1.8e-21 106.3 113 44.2
Lj3A1053G42 Lonicera japonica HOM05D005907 ORTHO05D007033 1.8e-21 106.3 113 44.2
SalBow4G0438 Salvia bowleyana HOM05D005907 ORTHO05D007033 1.8e-21 106.3 116 41.4
Sed0007709 Sechium edule HOM05D005907 ORTHO05D007033 1.8e-21 106.3 125 44.0
Eucgr.E01152 Eucalyptus grandis HOM05D005907 ORTHO05D007033 2.3e-21 105.9 119 42.0
Sp1g27370 Schrenkiella parvula HOM05D005907 ORTHO05D007033 3.0e-21 105.5 117 41.9
FAN08G1334 Fragaria x ananassa HOM05D005907 ORTHO05D007033 4.0e-21 105.1 116 45.7
Migut.A00472 Erythranthe guttata HOM05D005907 ORTHO05D007033 8.9e-21 104.0 114 40.4
Hund14310 Selenicereus undatus HOM05D005907 ORTHO05D007033 8.9e-21 104.0 122 45.1
Thhalv10008873m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 1.2e-20 103.6 110 43.6
Glyma.01G153000 Glycine max HOM05D005907 ORTHO05D007033 2.0e-20 102.8 116 44.0
Thecc.03G320600 Theobroma cacao HOM05D005907 ORTHO05D007033 2.0e-20 102.8 114 43.9
BcaB04g18131 Brassica carinata HOM05D005907 ORTHO05D007033 2.6e-20 102.4 110 44.5
BcaC07g37737 Brassica carinata HOM05D005907 ORTHO05D007033 2.6e-20 102.4 110 43.6
BolC8t48118H Brassica oleracea HOM05D005907 ORTHO05D007033 2.6e-20 102.4 110 43.6
ClCG07G011130 Citrullus lanatus HOM05D005907 ORTHO05D007033 2.6e-20 102.4 116 40.5
Lalb_Chr09g0325061 Lupinus albus HOM05D005907 ORTHO05D007033 3.4e-20 102.1 112 48.2
AT1G31720 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 4.4e-20 101.7 124 39.5
Glyma.09G218300 Glycine max HOM05D005907 ORTHO05D007033 4.4e-20 101.7 116 45.7
Manes.17G003749 Manihot esculenta HOM05D005907 ORTHO05D007033 5.7e-20 101.3 113 40.7
TAR629G0350 Trochodendron aralioides HOM05D005907 ORTHO05D007033 5.7e-20 101.3 115 45.2
Prupe.5G013600 Prunus persica HOM05D005907 ORTHO05D007033 7.5e-20 100.9 122 41.8
CsaV3_4G007120 Cucumis sativus L. HOM05D005907 ORTHO05D007033 1.3e-19 100.1 121 39.7
Gorai.008G218600 Gossypium raimondii HOM05D005907 ORTHO05D007033 1.3e-19 100.1 118 42.4
Phvul.003G278300 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 1.3e-19 100.1 104 48.1
Lalb_Chr05g0215181 Lupinus albus HOM05D005907 ORTHO05D007033 1.7e-19 99.8 112 44.6
VMungo1215G2629 Vigna mungo HOM05D001324 ORTHO05D001220 1.7e-19 99.8 112 44.6
Carub.0001s3002 Capsella rubella HOM05D005907 ORTHO05D007033 2.2e-19 99.4 110 41.8
Gohir.D12G203800 Gossypium hirsutum HOM05D005907 ORTHO05D007033 2.2e-19 99.4 105 45.7
Lalb_Chr16g0380441 Lupinus albus HOM05D005907 ORTHO05D007033 2.9e-19 99.0 112 45.5
Oeu046770.1 Olea europaea HOM05D005907 ORTHO05D007033 2.9e-19 99.0 126 36.5
Oeu047809.2 Olea europaea HOM05D005907 ORTHO05D007033 3.7e-19 98.6 117 41.9
PSO339G2078 Papaver somniferum HOM05D005907 ORTHO05D007033 3.7e-19 98.6 119 42.0
Peaxi162Scf00876g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 3.7e-19 98.6 118 39.0
Sc07g0008040 Simmondsia chinensis HOM05D005907 ORTHO05D007033 3.7e-19 98.6 102 45.1
Aa31LG2G14390 Aethionema arabicum HOM05D005907 ORTHO05D007033 4.9e-19 98.2 122 41.0
THA.LOC104814387 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 4.9e-19 98.2 121 37.2
TPR.G8986 Trifolium pratense HOM05D005907 ORTHO05D007033 4.9e-19 98.2 116 37.9
AL1G45790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 6.4e-19 97.8 110 41.8
Glyma.16G076400 Glycine max HOM05D005907 ORTHO05D007033 6.4e-19 97.8 104 46.2
Nn1g09337 Nelumbo nucifera HOM05D005907 ORTHO05D007033 6.4e-19 97.8 118 41.5
Phvul.002G122500 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 1.1e-18 97.1 116 42.2
SalBow8G0159 Salvia bowleyana HOM05D005907 ORTHO05D007033 1.1e-18 97.1 113 41.6
Duzib205G2043 Durio zibethinus HOM05D005907 ORTHO05D007033 1.4e-18 96.7 101 40.6
CARHR031020 Cardamine hirsuta HOM05D005907 ORTHO05D007033 2.4e-18 95.9 111 42.3
Medtr5g025640 Medicago truncatula HOM05D005907 ORTHO05D007033 2.4e-18 95.9 113 41.6
ATR0568G210 Amborella trichopoda HOM05D005907 ORTHO05D007033 3.2e-18 95.5 105 42.9
Dinv37434 Davidia involucrata HOM05D005907 ORTHO05D007033 7.0e-18 94.4 102 43.1
Lj2g0019236 Lotus japonicus HOM05D005907 ORTHO05D007033 7.0e-18 94.4 116 40.5
MD06G1011300 Malus domestica HOM05D005907 ORTHO05D007033 9.2e-18 94.0 131 36.6
PGR042G1103 Punica granatum HOM05D005907 ORTHO05D007033 1.2e-17 93.6 108 47.2
Zm00001eb251950 Zea mays HOM05D005907 ORTHO05D007033 1.2e-17 93.6 114 42.1
Gohir.D08G169700 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.6e-17 93.2 121 38.8
Gorai.004G176900 Gossypium raimondii HOM05D005907 ORTHO05D007033 1.6e-17 93.2 121 38.0
Gohir.A08G148600 Gossypium hirsutum HOM05D005907 ORTHO05D007033 2.0e-17 92.8 121 38.0
Gohir.A12G201000 Gossypium hirsutum HOM05D005907 ORTHO05D007033 2.0e-17 92.8 119 40.3
THA.LOC104806200 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 2.0e-17 92.8 134 38.1
Duzib068G0478 Durio zibethinus HOM05D005907 ORTHO05D007033 3.5e-17 92.0 116 37.9
SGA_v2.0_scaffold121G33056 Striga asiatica HOM05D005907 ORTHO05D007033 3.5e-17 92.0 118 39.8
VMungo0251G3198 Vigna mungo HOM05D005907 ORTHO05D007033 7.8e-17 90.9 103 41.7
ClCG11G016110 Citrullus lanatus HOM05D005907 ORTHO05D007033 1.0e-16 90.5 52 78.8
Medtr8g072220 Medicago truncatula HOM05D005907 ORTHO05D007033 1.0e-16 90.5 113 40.7
CDE01G0013 Ceratophyllum demersum HOM05D005907 ORTHO05D007033 3.9e-16 88.6 101 41.6
EL10Ac5g12591 Beta vulgaris HOM05D005907 ORTHO05D007033 5.0e-16 88.2 145 37.9
Psat2g145040 Pisum sativum HOM05D005907 ORTHO05D007033 6.6e-16 87.8 116 36.2
HanXRQChr08g0233691 Helianthus annuus HOM05D005907 ORTHO05D007033 8.6e-16 87.4 109 38.5
Psat4g109120 Pisum sativum HOM05D005907 ORTHO05D007033 1.1e-15 87.0 127 39.4
Nitab4.5_0000986g0090 Nicotiana tabacum HOM05D005907 ORTHO05D007033 1.5e-15 86.7 111 36.0
CAN.G998.7 Capsicum annuum HOM05D005907 ORTHO05D007033 1.9e-15 86.3 117 33.3
Aa31LG6G1970 Aethionema arabicum HOM05D005907 ORTHO05D007033 2.5e-15 85.9 122 36.9
Solyc08g075290.2 Solanum lycopersicum HOM05D005907 ORTHO05D007033 3.3e-15 85.5 115 33.0
Sopen08g023890 Solanum pennellii HOM05D005907 ORTHO05D007033 1.6e-14 83.2 106 34.9
Carub.0007s2186 Capsella rubella HOM05D005907 ORTHO05D007033 2.1e-14 82.8 115 36.5
ECA233G3754 Erigeron canadensis HOM05D005907 ORTHO05D007033 2.1e-14 82.8 102 43.1
Sp4g03880 Schrenkiella parvula HOM05D005907 ORTHO05D007033 6.2e-14 81.3 115 38.3
CARHR226160 Cardamine hirsuta HOM05D005907 ORTHO05D007033 1.4e-13 80.1 115 38.3
AL7G34790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 8.9e-13 77.4 115 35.7
Haze_08422 Corylus avellana HOM05D005907 ORTHO05D007033 8.9e-13 77.4 61 54.1
BcaNung01784 Brassica carinata HOM05D005907 ORTHO05D007033 1.5e-12 76.6 116 36.2
Thhalv10026210m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 3.4e-12 75.5 118 33.9
AT4G19370 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 4.4e-12 75.1 115 34.8
BcaC09g51418 Brassica carinata HOM05D005907 ORTHO05D007033 7.5e-12 74.3 115 35.7
A01p11320 Brassica napus HOM05D005907 ORTHO05D007033 7.5e-12 74.3 115 35.7
C01p13330 Brassica napus HOM05D005907 ORTHO05D007033 7.5e-12 74.3 115 35.7
BolC1t01308H Brassica oleracea HOM05D005907 ORTHO05D007033 7.5e-12 74.3 115 35.7
BraA01t01076Z Brassica rapa HOM05D005907 ORTHO05D007033 7.5e-12 74.3 115 35.7
Sp7g17980 Schrenkiella parvula HOM05D005907 ORTHO05D007033 7.5e-12 74.3 115 34.8
SEGI_15207 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 9.8e-12 73.9 102 40.2
Nitab4.5_0009213g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 2.2e-11 72.8 59 49.2
Os02g0703300 Oryza sativa ssp. japonica HOM05D005907 ORTHO05D007033 3.7e-11 72.0 100 35.0
unitig_37.g12906 Utricularia gibba HOM05D005907 ORTHO05D007033 1.1e-10 70.5 117 33.3
Nitab4.5_0006244g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 2.4e-10 69.3 103 34.0
arahy.Tifrunner.gnm1.ann1.93DHY7 Arachis hypogaea HOM05D005907 ORTHO05D007033 1.6e-09 66.6 60 53.3
ClCG11G016120 Citrullus lanatus HOM05D005907 ORTHO05D007033 4.6e-09 65.1 53 62.3
Cpa.g.c30909 Carica papaya HOM05D005907 ORTHO05D007033 5.0e-08 61.6 96 38.5
Nitab4.5_0000943g0070 Nicotiana tabacum HOM05D005907 ORTHO05D007033 3.3e-07 58.9 71 42.3
SMO201G0204 Selaginella moellendorffii HOM05D002819 ORTHO05D003207 3.3e-07 58.9 109 30.3
SEGI_27585 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 1.2e-06 57.0 105 33.3
SEGI_02210 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 2.1e-06 56.2 104 32.7
SEGI_02785 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 6.2e-06 54.7 102 29.4


User provided reference genes

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