Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 5.3e-207 724.2 378 100.0
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 3.3e-185 651.7 378 91.0
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 9.7e-185 650.2 378 90.2
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 3.1e-146 522.3 338 79.3
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 8.9e-146 520.8 335 79.7
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 1.2e-145 520.4 335 79.7
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 1.5e-145 520.0 349 77.1
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 4.4e-145 518.5 335 78.8
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 4.4e-145 518.5 338 79.0
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 7.5e-145 517.7 345 78.3
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 2.9e-144 515.8 328 81.1
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 8.3e-144 514.2 338 77.5
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 1.1e-143 513.8 335 79.4
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 1.4e-143 513.5 338 78.4
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 1.4e-143 513.5 330 78.8
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.9e-143 513.1 335 79.4
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 2.4e-143 512.7 335 77.9
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 3.2e-143 512.3 335 77.9
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 7.1e-143 511.1 338 77.2
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 7.1e-143 511.1 351 74.6
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 9.2e-143 510.8 338 78.7
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 2.7e-142 509.2 346 76.9
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 2.7e-142 509.2 346 76.9
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 6.0e-142 508.1 331 79.5
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 7.8e-142 507.7 346 76.6
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 2.3e-141 506.1 338 77.2
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 2.3e-141 506.1 346 76.6
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 2.3e-141 506.1 338 78.1
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 2.3e-141 506.1 343 75.8
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 3.0e-141 505.8 335 77.0
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 3.0e-141 505.8 346 74.9
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 5.1e-141 505.0 335 77.0
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 6.6e-141 504.6 340 76.5
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 1.1e-140 503.8 366 72.1
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 1.1e-140 503.8 335 77.6
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 1.9e-140 503.1 338 76.9
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 1.9e-140 503.1 353 74.2
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 1.9e-140 503.1 315 81.3
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 2.5e-140 502.7 353 75.4
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 2.5e-140 502.7 345 74.8
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 3.3e-140 502.3 346 75.7
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 3.3e-140 502.3 348 75.0
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 3.3e-140 502.3 336 77.4
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 4.3e-140 501.9 335 77.6
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 4.3e-140 501.9 335 77.0
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 5.6e-140 501.5 336 77.1
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 5.6e-140 501.5 335 76.1
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 1.2e-139 500.4 330 77.3
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 1.6e-139 500.0 335 75.8
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 8.1e-139 497.7 336 77.1
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 8.1e-139 497.7 353 74.5
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 1.1e-138 497.3 316 79.1
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 1.4e-138 496.9 335 75.5
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 1.8e-138 496.5 336 76.2
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 1.8e-138 496.5 335 75.5
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 2.3e-138 496.1 335 74.9
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 3.1e-138 495.7 337 76.0
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 3.1e-138 495.7 337 76.0
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.2e-137 493.8 351 74.1
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 1.2e-137 493.8 337 75.7
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 1.5e-137 493.4 335 75.8
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 2.0e-137 493.0 311 80.7
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 3.4e-137 492.3 337 75.4
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 7.6e-137 491.1 371 71.2
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 9.9e-137 490.7 372 69.4
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 1.7e-136 490.0 343 73.5
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 2.2e-136 489.6 347 72.6
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 6.4e-136 488.0 345 73.9
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 1.1e-135 487.3 311 80.1
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 1.1e-135 487.3 345 73.9
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 1.1e-135 487.3 316 77.5
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 1.6e-134 483.4 335 74.3
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 2.7e-134 482.6 399 66.7
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 3.5e-134 482.3 311 79.1
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 1.0e-133 480.7 339 73.5
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 7.3e-132 474.6 355 69.6
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 1.6e-131 473.4 335 71.6
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 6.2e-131 471.5 313 75.4
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 9.9e-129 464.2 353 70.8
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 9.3e-127 457.6 307 77.5
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 2.7e-126 456.1 302 78.5
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 3.9e-125 452.2 328 71.0
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 1.9e-124 449.9 302 75.8
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 2.5e-124 449.5 343 70.0
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 4.3e-124 448.7 287 80.1
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 7.3e-124 448.0 335 71.0
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 2.1e-123 446.4 312 72.8
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 2.0e-121 439.9 337 70.9
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 8.4e-120 434.5 330 70.9
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 4.2e-119 432.2 400 61.5
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 3.9e-117 425.6 273 79.5
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 6.7e-117 424.9 289 76.1
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 1.4e-114 417.2 290 73.8
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 1.8e-114 416.8 323 69.0
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 2.4e-114 416.4 314 67.8
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 1.7e-112 410.2 327 65.1
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 2.9e-112 409.5 311 68.8
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 8.7e-109 397.9 329 66.0
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 2.5e-108 396.4 338 64.2
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 4.8e-107 392.1 346 61.6
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 4.8e-107 392.1 242 82.6
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 1.5e-105 387.1 347 62.2
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 1.8e-101 373.6 255 74.1
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 7.4e-92 341.7 187 94.1
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 2.4e-90 336.7 219 76.7
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 1.7e-88 330.5 320 57.2
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 5.5e-87 325.5 217 74.7
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 1.5e-84 317.4 230 70.0
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 2.6e-81 306.6 312 53.8
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 3.4e-81 306.2 192 80.7
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 5.9e-81 305.4 308 57.1
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 6.3e-75 285.4 286 61.9
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 1.8e-74 283.9 266 60.2
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 1.3e-67 261.2 167 80.2
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 1.0e-61 241.5 213 59.6
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 3.5e-57 226.5 337 43.3
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 2.3e-56 223.8 151 73.5
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 9.8e-52 208.4 160 67.5
ClCG07G006250 Citrullus lanatus HOM05D005313 ORTHO05D006317 1.2e-49 201.4 110 92.7
A06p44480 Brassica napus HOM05D005313 ORTHO05D006317 2.3e-45 187.2 242 50.4
SHI04675 Sapria himalayana HOM05D005313 ORTHO05D006317 9.8e-44 181.8 186 54.3
AagrBONN_evm.TU.Sc2ySwM_368.1836 Anthoceros agrestis HOM05D005313 ORTHO05D006317 4.0e-37 159.8 128 62.5
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 6.8e-37 159.1 280 36.1
Oeu045874.1 Olea europaea HOM05D005313 ORTHO05D006317 4.1e-34 149.8 243 43.6
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 1.6e-33 147.9 263 38.8
RcHm_v2.0_Chr2g0157601 Rosa chinensis HOM05D005313 ORTHO05D006317 8.6e-32 142.1 112 64.3
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 1.5e-31 141.4 265 37.4
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.4e-29 134.8 85 74.1
TPR.G36891 Trifolium pratense HOM05D005313 ORTHO05D006317 4.4e-28 129.8 101 70.3
Glyma.07G165500 Glycine max HOM05D005313 ORTHO05D006317 1.2e-25 121.7 81 75.3
CsaV3_UNG236470 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.2e-22 111.7 67 89.6
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 1.3e-19 101.7 121 52.9
CAN.G1020.2 Capsicum annuum HOM05D005313 ORTHO05D006317 3.8e-19 100.1 113 50.4
MBI06_g07791_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.1e-18 95.9 59 86.4
Aa31LG11G8270 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.6e-17 94.7 88 61.4
TPR.G36912 Trifolium pratense HOM05D005313 ORTHO05D006317 1.7e-16 91.3 74 63.5
COL.COLO4_10084 Corchorus olitorius HOM05D005313 ORTHO05D006317 7.3e-15 85.9 51 76.5
Aa31LG11G8280 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.2e-14 85.1 62 62.9
BcaC06g31315 Brassica carinata HOM05D005313 ORTHO05D006317 2.6e-12 77.4 55 65.5
Actinidia01955 Actinidia chinensis HOM05D005313 ORTHO05D006317 6.0e-09 66.2 40 75.0


User provided reference genes

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