Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 6.0e-82 307.4 147 100.0
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 2.7e-74 282.0 147 92.5
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 1.3e-73 279.6 142 93.0
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 3.2e-67 258.5 151 80.1
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 1.0e-65 253.4 148 78.4
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 1.8e-65 252.7 149 80.5
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 2.3e-65 252.3 149 77.2
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 3.0e-65 251.9 148 78.4
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 1.5e-64 249.6 147 78.2
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 1.5e-64 249.6 144 77.8
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 3.3e-64 248.4 149 79.2
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 5.7e-64 247.7 144 77.1
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 9.7e-64 246.9 144 77.1
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 9.7e-64 246.9 144 77.1
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 1.6e-63 246.1 147 77.6
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 1.6e-63 246.1 143 81.8
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 2.8e-63 245.4 147 76.2
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 4.8e-63 244.6 147 76.9
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 4.8e-63 244.6 150 75.3
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 4.8e-63 244.6 144 77.1
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 8.2e-63 243.8 147 75.5
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 8.2e-63 243.8 142 80.3
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 1.1e-62 243.4 142 79.6
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 1.4e-62 243.0 144 75.7
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.4e-62 243.0 143 76.9
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 1.4e-62 243.0 142 75.4
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 1.4e-62 243.0 147 76.9
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 1.8e-62 242.7 145 75.9
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 1.8e-62 242.7 140 78.6
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 1.8e-62 242.7 141 78.0
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 1.8e-62 242.7 147 76.2
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 1.8e-62 242.7 147 76.9
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.1e-62 241.5 142 74.6
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.1e-62 241.5 144 75.7
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 4.1e-62 241.5 132 83.3
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 5.3e-62 241.1 143 79.0
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 5.3e-62 241.1 142 74.6
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 5.3e-62 241.1 142 79.6
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 5.3e-62 241.1 147 76.2
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 9.0e-62 240.4 145 75.2
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 9.0e-62 240.4 145 75.2
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 9.0e-62 240.4 147 75.5
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 9.0e-62 240.4 145 74.5
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 2.0e-61 239.2 143 76.9
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 2.0e-61 239.2 147 75.5
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 2.0e-61 239.2 142 78.9
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 2.6e-61 238.8 141 78.7
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 3.4e-61 238.4 131 82.4
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 4.5e-61 238.0 140 76.4
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 7.6e-61 237.3 138 79.7
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 7.6e-61 237.3 149 73.8
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 1.0e-60 236.9 124 84.7
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.0e-60 236.9 149 73.8
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 1.7e-60 236.1 140 77.9
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 2.2e-60 235.7 128 82.0
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.2e-60 235.7 143 75.5
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 2.9e-60 235.3 145 75.2
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 2.9e-60 235.3 126 84.1
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 3.8e-60 235.0 142 73.9
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 3.8e-60 235.0 135 76.3
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 6.5e-60 234.2 146 73.3
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 6.5e-60 234.2 144 75.0
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 1.1e-59 233.4 139 77.0
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 1.1e-59 233.4 129 81.4
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 1.4e-59 233.0 147 72.8
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.9e-59 232.6 141 76.6
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 4.2e-59 231.5 127 81.9
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 5.5e-59 231.1 142 76.8
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 7.2e-59 230.7 134 75.4
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 1.2e-58 229.9 138 76.8
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 2.1e-58 229.2 137 75.9
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 6.1e-58 227.6 147 70.1
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 6.1e-58 227.6 148 70.9
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 1.1e-56 223.4 147 69.4
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 4.3e-56 221.5 165 65.5
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 1.7e-55 219.5 142 69.7
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 4.8e-55 218.0 140 71.4
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 8.2e-55 217.2 132 73.5
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.1e-54 216.9 141 69.5
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 1.8e-54 216.1 140 70.7
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 2.4e-54 215.7 140 70.0
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 2.4e-54 215.7 140 70.7
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 2.4e-54 215.7 132 73.5
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 4.1e-54 214.9 168 62.5
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 5.3e-54 214.5 133 72.2
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 5.3e-54 214.5 133 72.2
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 2.0e-53 212.6 137 67.2
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 2.0e-53 212.6 140 69.3
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 2.0e-53 212.6 126 76.2
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 2.6e-53 212.2 141 67.4
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 2.6e-53 212.2 143 67.1
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 4.5e-53 211.5 136 70.6
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 4.5e-53 211.5 141 68.1
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 4.5e-53 211.5 141 68.1
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 7.7e-53 210.7 138 68.1
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 1.0e-52 210.3 138 69.6
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 1.0e-52 210.3 208 52.4
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 2.9e-52 208.8 141 68.1
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 3.8e-52 208.4 132 71.2
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 6.5e-52 207.6 146 65.8
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 6.5e-52 207.6 143 65.0
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 8.5e-52 207.2 137 67.2
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.1e-51 206.8 138 69.6
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 6.1e-50 201.1 134 68.7
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 3.9e-49 198.4 125 75.2
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 3.9e-49 198.4 101 92.1
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 3.9e-49 198.4 136 68.4
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 7.4e-48 194.1 124 73.4
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 7.4e-48 194.1 178 56.7
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 5.3e-46 188.0 136 61.8
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 3.8e-44 181.8 109 76.1
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 1.8e-41 172.9 94 81.9
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 3.3e-40 168.7 93 80.6
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 7.4e-40 167.5 96 79.2
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.0e-36 157.1 97 73.2
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 1.3e-36 156.8 96 79.2
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 9.4e-35 150.6 97 74.2
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 3.8e-20 102.1 109 53.2
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 1.8e-17 93.2 63 66.7
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 4.1e-14 82.0 43 81.4
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 7.8e-13 77.8 47 70.2
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 4.7e-10 68.6 47 59.6
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 6.8e-09 64.7 35 88.6
MD13G1229600 Malus domestica HOM05D006458 ORTHO05D245398 2.6e-08 62.8 57 56.1
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 6.4e-07 58.2 61 52.5
A06p35450 Brassica napus HOM05D006458 ORTHO05D041657 5.4e-06 55.1 39 61.5
BraA06t26468Z Brassica rapa HOM05D006458 ORTHO05D041657 5.4e-06 55.1 39 61.5


User provided reference genes

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