Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 1.3e-51 206.1 100 100.0
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 2.4e-50 201.8 100 97.0
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 2.3e-45 185.3 97 88.7
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 5.2e-45 184.1 97 89.7
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 1.2e-44 183.0 96 88.5
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 7.5e-44 180.3 96 88.5
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 7.5e-44 180.3 96 87.5
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 7.5e-44 180.3 94 89.4
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 9.9e-44 179.9 96 87.5
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 9.9e-44 179.9 96 88.5
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 9.9e-44 179.9 96 87.5
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 2.9e-43 178.3 96 86.5
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 3.7e-43 177.9 96 86.5
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 6.4e-43 177.2 96 85.4
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 6.4e-43 177.2 96 85.4
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 6.4e-43 177.2 96 84.4
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 8.3e-43 176.8 94 87.2
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 1.1e-42 176.4 96 85.4
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 1.1e-42 176.4 96 86.5
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 1.1e-42 176.4 96 86.5
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 1.1e-42 176.4 95 85.3
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 1.1e-42 176.4 96 85.4
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 1.9e-42 175.6 96 83.3
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 1.9e-42 175.6 94 87.2
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 2.4e-42 175.3 96 82.3
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 2.4e-42 175.3 96 86.5
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 2.4e-42 175.3 96 84.4
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 2.4e-42 175.3 95 84.2
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 2.4e-42 175.3 96 84.4
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 2.4e-42 175.3 96 83.3
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 4.1e-42 174.5 96 83.3
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 5.4e-42 174.1 95 84.2
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 5.4e-42 174.1 96 82.3
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 7.1e-42 173.7 96 83.3
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 7.1e-42 173.7 95 83.2
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 7.1e-42 173.7 95 83.2
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 7.1e-42 173.7 95 83.2
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 9.2e-42 173.3 94 86.2
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.2e-41 172.9 96 82.3
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 2.1e-41 172.2 96 81.2
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 2.1e-41 172.2 96 81.2
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 2.1e-41 172.2 96 81.2
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 2.1e-41 172.2 96 82.3
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 2.1e-41 172.2 93 84.9
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 2.1e-41 172.2 95 82.1
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 2.1e-41 172.2 96 83.3
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 2.7e-41 171.8 96 86.5
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 2.7e-41 171.8 96 83.3
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 3.5e-41 171.4 94 81.9
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 3.5e-41 171.4 96 79.2
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 3.5e-41 171.4 96 80.2
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 7.8e-41 170.2 96 83.3
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 1.3e-40 169.5 94 83.0
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 1.7e-40 169.1 96 78.1
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 2.3e-40 168.7 96 77.1
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 2.3e-40 168.7 99 79.8
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 2.3e-40 168.7 96 80.2
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 3.0e-40 168.3 95 80.0
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 3.0e-40 168.3 94 80.9
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 5.1e-40 167.5 99 75.8
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 6.6e-40 167.2 96 76.0
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 6.6e-40 167.2 96 79.2
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 8.6e-40 166.8 95 78.9
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 8.6e-40 166.8 96 76.0
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 8.6e-40 166.8 96 80.2
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 1.1e-39 166.4 96 80.2
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.1e-39 166.4 96 80.2
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.1e-39 166.4 96 80.2
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.1e-39 166.4 96 80.2
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.1e-39 166.4 96 80.2
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 1.9e-39 165.6 95 82.1
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 2.5e-39 165.2 96 78.1
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 2.5e-39 165.2 96 78.1
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 2.5e-39 165.2 96 78.1
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 2.5e-39 165.2 96 78.1
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 2.5e-39 165.2 94 79.8
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 3.3e-39 164.9 96 79.2
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 5.6e-39 164.1 96 77.1
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 7.3e-39 163.7 96 78.1
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 7.3e-39 163.7 96 77.1
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 9.5e-39 163.3 96 78.1
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 9.5e-39 163.3 96 78.1
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 9.5e-39 163.3 96 78.1
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 9.5e-39 163.3 111 71.2
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 9.5e-39 163.3 96 78.1
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 9.5e-39 163.3 96 74.0
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.2e-38 162.9 96 76.0
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 2.1e-38 162.2 96 77.1
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 2.1e-38 162.2 96 78.1
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 3.6e-38 161.4 93 76.3
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 3.6e-38 161.4 96 78.1
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 4.7e-38 161.0 96 78.1
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 4.7e-38 161.0 96 78.1
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 8.1e-38 160.2 95 77.9
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 8.1e-38 160.2 95 75.8
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 8.1e-38 160.2 95 75.8
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 1.4e-37 159.5 96 75.0
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 1.8e-37 159.1 96 70.8
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 2.4e-37 158.7 119 66.4
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 2.4e-37 158.7 119 66.4
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 2.4e-37 158.7 119 66.4
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 5.2e-37 157.5 96 75.0
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 8.9e-37 156.8 96 76.0
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 8.9e-37 156.8 91 79.1
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 2.6e-36 155.2 129 60.5
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 2.6e-36 155.2 114 68.4
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 4.4e-36 154.5 84 85.7
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 5.8e-36 154.1 94 77.7
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 2.2e-35 152.1 94 74.5
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 2.2e-35 152.1 94 74.5
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 4.2e-34 147.9 139 56.8
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 4.2e-34 147.9 139 56.8
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 1.3e-32 142.9 96 71.9
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 9.6e-31 136.7 96 72.9
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 2.4e-29 132.1 72 84.7
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 4.3e-23 111.3 95 52.6
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 2.4e-21 105.5 95 50.5
HanXRQChr06g0180851 Helianthus annuus HOM05D006309 ORTHO05D007937 1.2e-17 93.2 50 84.0
HanXRQChr16g0506271 Helianthus annuus HOM05D006309 ORTHO05D007937 1.2e-17 93.2 50 84.0
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 1.6e-17 92.8 53 83.0
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 1.3e-16 89.7 47 89.4
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 2.3e-16 89.0 50 76.0
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-15 86.7 49 77.6
Glyma.09G093300 Glycine max HOM05D006309 ORTHO05D000504 3.1e-13 78.6 59 57.6
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus HOM05D006309 ORTHO05D007937 6.0e-09 64.3 39 74.4
Potri.013G002301 Populus trichocarpa HOM05D006309 ORTHO05D007937 6.7e-08 60.8 41 68.3
TAR627G1128 Trochodendron aralioides HOM05D006309 ORTHO05D007937 9.6e-07 57.0 37 78.4


User provided reference genes

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