Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 0.0e+00 1381.3 697 100.0
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 0.0e+00 1249.6 697 90.1
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 0.0e+00 1238.4 715 88.5
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 0.0e+00 1197.2 706 86.3
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 1.1e-295 1019.6 707 74.0
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 8.9e-293 1010.0 714 72.8
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 4.6e-289 997.7 668 75.0
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 4.6e-289 997.7 668 75.0
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 6.6e-288 993.8 698 72.9
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 8.6e-288 993.4 707 71.3
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 2.5e-287 991.9 701 71.9
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 2.5e-287 991.9 700 71.7
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 3.4e-284 981.5 708 70.8
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 4.4e-284 981.1 709 71.2
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 9.9e-284 979.9 708 70.2
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 2.2e-283 978.8 708 70.2
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 8.4e-283 976.9 708 69.8
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 9.3e-282 973.4 675 72.6
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.6e-281 972.6 687 71.3
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.5e-279 965.3 703 69.8
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 4.3e-279 964.5 671 71.7
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 5.6e-279 964.1 666 71.5
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 2.1e-278 962.2 694 69.7
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 2.8e-278 961.8 709 68.8
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 2.8e-278 961.8 696 69.8
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 6.2e-278 960.7 697 69.6
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 2.4e-277 958.7 686 71.3
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 3.1e-277 958.4 741 66.8
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 4.0e-277 958.0 697 69.3
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 5.3e-277 957.6 670 70.9
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.5e-276 956.1 698 69.5
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 2.0e-276 955.7 696 71.1
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 3.4e-276 954.9 697 69.2
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 3.4e-276 954.9 680 69.9
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 7.6e-276 953.7 706 68.8
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 9.9e-276 953.4 672 71.3
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 5.4e-274 947.6 691 69.3
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 9.3e-274 946.8 693 70.0
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 9.3e-274 946.8 691 70.5
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 1.2e-273 946.4 700 68.7
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 7.9e-273 943.7 701 68.8
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 3.0e-272 941.8 671 70.8
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 3.9e-272 941.4 703 68.3
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 6.6e-272 940.6 680 71.0
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 8.7e-272 940.3 695 69.1
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 1.5e-271 939.5 680 70.1
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 1.9e-271 939.1 692 69.4
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 3.6e-270 934.9 683 68.5
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 4.8e-270 934.5 683 68.7
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 4.8e-270 934.5 682 69.6
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 8.1e-270 933.7 683 69.1
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 4.0e-269 931.4 669 69.8
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 5.3e-269 931.0 686 68.2
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 3.4e-268 928.3 670 69.3
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 5.8e-268 927.5 695 67.6
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 7.6e-268 927.2 670 69.0
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 9.9e-268 926.8 681 68.3
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 1.3e-267 926.4 683 68.2
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 4.9e-267 924.5 683 68.1
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 6.4e-267 924.1 669 71.3
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 2.4e-266 922.2 705 67.2
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 4.2e-266 921.4 685 68.6
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 7.1e-266 920.6 701 67.6
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.7e-265 918.7 710 66.5
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 2.7e-265 918.7 705 67.9
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 2.7e-265 918.7 674 69.0
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 3.0e-264 915.2 702 67.8
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 1.1e-263 913.3 680 68.5
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 1.1e-263 913.3 706 67.1
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 7.4e-263 910.6 690 68.0
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 3.1e-261 905.2 698 67.0
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 5.3e-261 904.4 669 68.5
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 3.1e-253 878.6 601 72.9
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 1.6e-249 866.3 712 64.3
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.0e-248 863.6 706 63.3
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 1.3e-248 863.2 693 64.5
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 1.1e-247 860.1 673 65.1
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 4.3e-247 858.2 626 70.0
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 2.4e-245 852.4 593 71.5
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 1.3e-243 846.7 718 61.7
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 1.1e-242 843.6 667 66.3
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 1.4e-237 826.6 690 63.6
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 2.4e-237 825.9 595 68.7
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 1.1e-234 817.0 669 62.5
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.3e-230 803.5 667 61.8
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 7.0e-229 797.7 605 68.6
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 4.4e-223 778.5 618 65.4
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 7.0e-221 771.2 575 67.7
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 7.7e-220 767.7 629 62.3
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 2.9e-219 765.8 539 70.7
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 1.5e-202 710.3 1249 37.7
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 7.8e-188 661.4 634 54.7
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 1.5e-186 657.1 673 52.5
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 7.1e-181 638.3 631 53.2
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 6.2e-177 625.2 663 49.9
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 3.6e-169 599.4 434 70.3
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 1.2e-164 584.3 400 71.5
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 2.1e-156 557.0 401 66.8
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.6e-148 530.8 405 67.9
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 2.9e-134 483.4 724 41.6
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 1.8e-131 474.2 474 52.5
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 4.3e-130 469.5 610 45.1
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 9.1e-128 461.8 333 69.1
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 1.3e-110 404.8 273 71.1
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 2.3e-99 367.5 302 66.6
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.3e-99 367.5 218 81.2
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 1.5e-90 338.2 448 47.5
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 3.4e-90 337.0 281 65.5
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 3.4e-90 337.0 315 59.4
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 1.9e-85 321.2 203 77.3
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 1.0e-83 315.5 285 61.1
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 3.0e-83 313.9 203 75.4
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 5.0e-78 296.6 665 34.4
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.8e-60 237.7 155 74.8
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.4e-48 198.7 148 64.9
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 3.1e-43 181.0 145 66.9
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 2.4e-40 171.4 203 50.7
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 6.4e-33 146.7 103 68.9
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 3.9e-30 137.5 197 44.2
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 3.1e-27 127.9 99 64.6
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.9e-24 118.6 123 53.7
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.5e-21 109.0 106 51.9
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 8.5e-17 93.2 68 61.8
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 5.5e-16 90.5 106 52.8
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 2.7e-15 88.2 51 74.5
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 5.3e-11 73.9 61 55.7


User provided reference genes

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