Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 4.1e-44 181.0 92 100.0
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 5.7e-30 134.0 71 95.8
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 3.1e-28 128.3 71 90.1
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 4.5e-27 124.4 70 90.0
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 5.0e-26 120.9 71 83.1
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 1.5e-25 119.4 75 81.3
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 5.5e-25 117.5 70 82.9
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 3.7e-21 104.8 76 72.4
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 3.5e-19 98.2 71 71.8
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 5.9e-19 97.4 69 75.4
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 2.2e-18 95.5 76 61.8
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 5.0e-18 94.4 71 67.6
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 6.5e-18 94.0 79 63.3
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 8.5e-18 93.6 71 67.6
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 1.1e-17 93.2 67 76.1
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 1.5e-17 92.8 71 66.2
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 3.2e-17 91.7 66 66.7
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 4.2e-17 91.3 69 71.0
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 5.5e-17 90.9 69 71.0
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 5.5e-17 90.9 73 65.8
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 7.2e-17 90.5 62 72.6
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 7.2e-17 90.5 69 65.2
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 7.2e-17 90.5 66 65.2
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 9.5e-17 90.1 70 64.3
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 1.2e-16 89.7 64 70.3
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.6e-16 89.4 73 64.4
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 1.6e-16 89.4 62 69.4
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 2.8e-16 88.6 71 62.0
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.6e-16 88.2 62 71.0
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 3.6e-16 88.2 64 70.3
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 3.6e-16 88.2 70 62.9
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 3.6e-16 88.2 70 62.9
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 6.1e-16 87.4 63 68.3
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 8.0e-16 87.0 62 67.7
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 8.0e-16 87.0 63 68.3
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 1.0e-15 86.7 70 57.1
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 1.0e-15 86.7 70 57.1
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 1.4e-15 86.3 69 63.8
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 1.8e-15 85.9 62 66.1
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 2.3e-15 85.5 60 68.3
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 2.3e-15 85.5 63 69.8
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 3.0e-15 85.1 63 63.5
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 3.0e-15 85.1 66 65.2
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 3.0e-15 85.1 66 65.2
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 4.0e-15 84.7 66 66.7
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 4.0e-15 84.7 55 76.4
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 5.2e-15 84.3 65 66.2
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 5.2e-15 84.3 57 68.4
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 8.8e-15 83.6 63 61.9
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 8.8e-15 83.6 74 59.5
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.2e-14 83.2 64 67.2
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.2e-14 83.2 64 67.2
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 1.2e-14 83.2 67 64.2
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.2e-14 83.2 55 72.7
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 2.6e-14 82.0 65 66.2
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 3.4e-14 81.6 63 63.5
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 4.4e-14 81.3 69 59.4
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 4.4e-14 81.3 58 69.0
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 5.7e-14 80.9 65 63.1
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 5.7e-14 80.9 58 65.5
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 7.5e-14 80.5 61 65.6
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 7.5e-14 80.5 63 60.3
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 7.5e-14 80.5 65 56.9
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 9.8e-14 80.1 69 56.5
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 9.8e-14 80.1 69 56.5
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.3e-13 79.7 63 60.3
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 1.3e-13 79.7 62 66.1
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 1.7e-13 79.3 54 74.1
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 1.7e-13 79.3 69 65.2
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 2.2e-13 79.0 54 74.1
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 2.8e-13 78.6 51 72.5
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 2.8e-13 78.6 59 69.5
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 3.7e-13 78.2 58 63.8
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 4.9e-13 77.8 53 71.7
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 6.3e-13 77.4 59 62.7
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 6.3e-13 77.4 54 68.5
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 8.3e-13 77.0 72 55.6
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 8.3e-13 77.0 69 62.3
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 8.3e-13 77.0 68 61.8
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 8.3e-13 77.0 73 58.9
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 8.3e-13 77.0 74 59.5
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 1.4e-12 76.3 59 61.0
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 1.4e-12 76.3 54 70.4
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 1.8e-12 75.9 63 60.3
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 2.4e-12 75.5 47 78.7
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 2.4e-12 75.5 47 80.9
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.4e-12 75.5 47 80.9
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.4e-12 75.5 47 80.9
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 3.1e-12 75.1 64 62.5
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 3.1e-12 75.1 63 55.6
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 4.1e-12 74.7 69 58.0
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 4.1e-12 74.7 66 60.6
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 5.4e-12 74.3 56 60.7
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 7.0e-12 73.9 59 59.3
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 7.0e-12 73.9 61 57.4
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 9.2e-12 73.6 59 57.6
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 1.2e-11 73.2 54 68.5
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.2e-11 73.2 65 58.5
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.6e-11 72.8 51 68.6
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.7e-11 72.0 47 78.7
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 3.5e-11 71.6 55 60.0
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 5.9e-11 70.9 54 63.0
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 5.9e-11 70.9 65 52.3
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 5.9e-11 70.9 65 52.3
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 5.9e-11 70.9 65 52.3
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 5.9e-11 70.9 65 52.3
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 5.9e-11 70.9 52 63.5
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 5.9e-11 70.9 64 54.7
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 1.0e-10 70.1 66 56.1
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 1.7e-10 69.3 48 68.8
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 2.3e-10 68.9 47 63.8
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 2.9e-10 68.6 53 60.4
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 5.0e-10 67.8 56 57.1
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 5.0e-10 67.8 53 60.4
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 5.0e-10 67.8 65 52.3
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 6.6e-10 67.4 62 56.5
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 2.5e-09 65.5 63 52.4
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 2.5e-09 65.5 63 55.6
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 4.3e-09 64.7 69 55.1
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.0e-07 60.1 74 48.6
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 1.0e-07 60.1 52 63.5
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 5.2e-07 57.8 45 53.3
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 6.8e-07 57.4 72 45.8
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 8.9e-07 57.0 51 56.9
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 5.7e-06 54.3 54 51.9
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 9.8e-06 53.5 57 49.1


User provided reference genes

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