Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 6.3e-42 173.7 89 100.0
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 1.2e-32 142.9 96 76.0
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 2.0e-32 142.1 96 75.0
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 2.2e-31 138.7 94 75.5
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 8.5e-31 136.7 93 74.2
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 8.5e-31 136.7 91 75.8
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 1.9e-30 135.6 89 76.4
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 2.1e-29 132.1 91 72.5
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 2.7e-29 131.7 90 72.2
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 3.6e-29 131.3 88 73.9
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 1.0e-28 129.8 91 72.5
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 1.4e-28 129.4 89 71.9
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 1.4e-28 129.4 89 70.8
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.4e-28 129.4 89 70.8
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.8e-28 129.0 89 71.9
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 1.8e-28 129.0 91 68.1
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 1.8e-28 129.0 95 69.5
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 2.3e-28 128.6 87 70.1
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 2.3e-28 128.6 93 66.7
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 5.2e-28 127.5 89 70.8
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 5.2e-28 127.5 89 70.8
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 5.2e-28 127.5 91 69.2
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 6.7e-28 127.1 90 71.1
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 8.8e-28 126.7 89 68.5
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 1.2e-27 126.3 89 69.7
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 2.6e-27 125.2 88 65.9
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 3.3e-27 124.8 88 69.3
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 4.4e-27 124.4 87 71.3
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 9.7e-27 123.2 88 69.3
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 9.7e-27 123.2 92 67.4
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 9.7e-27 123.2 92 67.4
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 1.7e-26 122.5 91 70.3
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 2.8e-26 121.7 90 66.7
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 2.8e-26 121.7 91 65.9
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 2.8e-26 121.7 84 71.4
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 3.7e-26 121.3 74 77.0
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 4.8e-26 120.9 92 66.3
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 8.3e-26 120.2 91 62.6
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 8.3e-26 120.2 91 64.8
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 8.3e-26 120.2 85 69.4
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 1.1e-25 119.8 74 78.4
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 3.1e-25 118.2 92 65.2
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 3.1e-25 118.2 88 65.9
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 3.1e-25 118.2 86 66.3
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 7.0e-25 117.1 89 64.0
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 7.0e-25 117.1 94 63.8
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 9.1e-25 116.7 81 67.9
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 9.1e-25 116.7 85 65.9
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 1.6e-24 115.9 89 64.0
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.6e-24 115.9 91 62.6
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 1.6e-24 115.9 86 61.6
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 2.0e-24 115.5 70 77.1
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 2.0e-24 115.5 91 63.7
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 2.0e-24 115.5 96 62.5
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 4.5e-24 114.4 94 63.8
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 5.9e-24 114.0 91 62.6
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 5.9e-24 114.0 91 62.6
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 7.7e-24 113.6 91 62.6
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 7.7e-24 113.6 88 63.6
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 7.7e-24 113.6 76 73.7
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 1.0e-23 113.2 94 61.7
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.3e-23 112.8 76 72.4
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.3e-23 112.8 74 74.3
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 1.7e-23 112.5 87 64.4
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 2.9e-23 111.7 92 59.8
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 3.8e-23 111.3 91 61.5
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 3.8e-23 111.3 91 63.7
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 5.0e-23 110.9 75 69.3
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 5.0e-23 110.9 85 63.5
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 6.5e-23 110.5 85 65.9
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 8.5e-23 110.2 85 62.4
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 5.5e-22 107.5 79 65.8
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 7.2e-22 107.1 91 60.4
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.2e-21 106.3 79 64.6
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 2.7e-21 105.1 85 63.5
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 1.8e-20 102.4 72 65.3
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 6.8e-20 100.5 94 57.4
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.2e-19 99.8 53 83.0
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 3.4e-19 98.2 91 58.2
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 3.4e-19 98.2 69 65.2
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 1.7e-18 95.9 65 69.2
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 1.7e-18 95.9 75 62.7
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 1.1e-17 93.2 100 48.0
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 6.6e-15 84.0 77 57.1
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 1.1e-14 83.2 80 51.2
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 2.1e-13 79.0 50 76.0
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 1.8e-12 75.9 49 71.4
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 1.2e-11 73.2 93 45.2
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 1.8e-09 65.9 55 54.5
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 4.1e-09 64.7 86 45.3
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 5.9e-08 60.8 41 65.9
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 1.9e-06 55.8 46 60.9


User provided reference genes

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