Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 2.0e-239 832.0 416 100.0
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 1.8e-163 579.7 363 80.4
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 3.0e-155 552.4 333 81.4
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 3.3e-141 505.8 344 71.8
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 6.2e-140 501.5 349 69.6
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 5.4e-136 488.4 333 71.2
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 9.2e-136 487.6 370 65.4
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 1.0e-134 484.2 342 69.3
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 1.7e-134 483.4 344 67.4
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 6.6e-134 481.5 342 70.8
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 6.6e-134 481.5 335 67.5
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 6.6e-134 481.5 342 70.2
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 7.3e-133 478.0 342 71.9
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 2.8e-132 476.1 341 68.9
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 6.2e-132 474.9 332 68.7
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 1.8e-131 473.4 342 68.7
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 2.3e-131 473.0 336 68.5
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 6.8e-131 471.5 343 68.5
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 2.6e-130 469.5 287 81.9
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 4.4e-130 468.8 342 69.0
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 5.8e-130 468.4 343 69.1
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 9.8e-130 467.6 326 69.6
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 9.8e-130 467.6 326 69.6
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 9.8e-130 467.6 348 65.2
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 9.8e-130 467.6 337 67.4
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 1.7e-129 466.8 342 65.8
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 1.7e-129 466.8 343 67.3
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 2.9e-129 466.1 360 65.0
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 3.7e-129 465.7 315 71.4
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 6.4e-129 464.9 342 68.4
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.4e-128 463.8 347 68.0
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 1.9e-128 463.4 314 71.0
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 2.4e-128 463.0 309 71.8
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 9.2e-128 461.1 309 70.6
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 2.7e-127 459.5 337 66.8
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 3.5e-127 459.1 307 72.0
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 4.6e-127 458.8 345 64.9
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 4.6e-127 458.8 336 66.1
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 4.6e-127 458.8 315 70.8
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 7.8e-127 458.0 344 67.4
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.0e-126 457.6 313 70.6
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 1.0e-126 457.6 311 72.7
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.3e-126 457.2 325 70.2
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 1.3e-126 457.2 308 71.1
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 6.6e-126 454.9 311 70.7
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 5.6e-125 451.8 309 70.2
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 7.3e-125 451.4 307 70.0
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 7.3e-125 451.4 317 69.4
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 2.1e-124 449.9 321 67.9
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.6e-124 449.1 326 66.9
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 3.6e-124 449.1 339 66.1
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 8.1e-124 448.0 330 66.1
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 1.1e-123 447.6 325 67.4
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.4e-123 447.2 343 64.7
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 1.8e-123 446.8 352 63.1
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 4.0e-123 445.7 330 65.8
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 4.0e-123 445.7 334 64.7
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 2.0e-122 443.4 323 66.3
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 2.0e-122 443.4 330 65.2
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 3.4e-122 442.6 328 66.2
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.3e-121 440.7 313 68.7
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.3e-121 440.7 313 68.7
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 2.9e-121 439.5 328 65.5
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 6.4e-121 438.3 308 67.5
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.3e-118 430.6 340 61.8
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 3.3e-117 426.0 309 66.3
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 7.3e-117 424.9 307 64.8
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.8e-116 422.9 308 66.2
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 5.2e-115 418.7 365 60.0
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.2e-114 417.5 282 71.3
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 2.6e-114 416.4 308 65.6
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 2.6e-114 416.4 283 72.4
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 5.8e-114 415.2 314 63.7
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 3.8e-113 412.5 314 67.2
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 4.2e-112 409.1 312 62.8
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 1.2e-111 407.5 307 66.8
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 7.8e-111 404.8 311 64.6
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 1.0e-110 404.4 318 64.8
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 3.9e-110 402.5 311 65.0
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 3.1e-107 392.9 291 69.1
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 6.9e-99 365.2 307 61.2
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 2.1e-95 353.6 308 60.4
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.5e-93 347.4 224 75.4
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 1.0e-89 334.7 248 66.9
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.7e-89 334.0 320 53.8
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 3.2e-88 329.7 299 52.5
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 3.3e-85 319.7 206 74.3
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 1.5e-82 310.8 294 53.7
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 4.5e-82 309.3 220 66.8
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.1e-80 304.7 326 48.8
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 3.2e-80 303.1 301 47.8
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 2.1e-79 300.4 311 52.7
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.4e-75 287.7 312 51.3
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 3.1e-67 260.0 219 58.0
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 1.0e-65 255.0 194 63.9
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 1.4e-64 251.1 302 43.4
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.1e-61 241.5 218 55.0
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 3.1e-59 233.4 350 36.3
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 2.6e-58 230.3 170 68.8
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 3.6e-55 219.9 258 44.2
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 1.1e-48 198.4 297 40.7
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 3.6e-47 193.4 199 51.8
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 9.1e-43 178.7 209 48.3
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.5e-37 161.4 136 56.6
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.3e-33 148.3 88 78.4
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 5.0e-33 146.4 100 69.0
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 1.5e-32 144.8 88 73.9
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 3.6e-31 140.2 91 78.0
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.0e-29 134.4 107 58.9
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 8.3e-28 129.0 100 61.0
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 2.7e-26 124.0 139 46.0
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 1.0e-25 122.1 201 38.8
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 2.5e-24 117.5 286 29.0
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.6e-23 113.6 88 54.5
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 2.1e-07 61.2 30 83.3


User provided reference genes

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