Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021060 Sechium edule HOM05D007501 ORTHO05D009528 4.3e-59 231.5 149 100.0
CsaV3_4G032800 Cucumis sativus L. HOM05D007501 ORTHO05D009528 1.3e-47 193.4 154 66.9
ClCG11G017140 Citrullus lanatus HOM05D007501 ORTHO05D009528 2.0e-40 169.5 146 74.7
MELO3C027342.2 Cucumis melo HOM05D007501 ORTHO05D009528 1.3e-39 166.8 138 63.8
Ciclev10024060m.g Citrus clementina HOM05D007501 ORTHO05D009528 3.2e-22 109.0 157 42.7
Gohir.D11G302600 Gossypium hirsutum HOM05D007501 ORTHO05D009528 9.3e-22 107.5 182 39.0
Gorai.007G332200 Gossypium raimondii HOM05D007501 ORTHO05D009528 1.6e-21 106.7 182 38.5
CiPaw.12G110200 Carya illinoinensis HOM05D007501 ORTHO05D009528 2.1e-21 106.3 162 42.0
Gohir.A11G289800 Gossypium hirsutum HOM05D007501 ORTHO05D009528 2.1e-21 106.3 182 38.5
Sabra11G0077300 Salix brachista HOM05D007501 ORTHO05D009528 1.3e-20 103.6 184 37.5
COL.COLO4_03607 Corchorus olitorius HOM05D007501 ORTHO05D009528 3.9e-20 102.1 182 37.4
GSVIVG01014087001 Vitis vinifera HOM05D007501 ORTHO05D009528 5.1e-20 101.7 179 38.5
Sabra11G0082200 Salix brachista HOM05D007501 ORTHO05D009528 6.6e-20 101.3 184 37.0
Dinv13355 Davidia involucrata HOM05D007501 ORTHO05D009528 1.1e-19 100.5 174 40.2
Potri.011G103500 Populus trichocarpa HOM05D007501 ORTHO05D009528 1.1e-19 100.5 188 36.7
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 2.5e-19 99.4 180 36.7
Manes.03G078700 Manihot esculenta HOM05D007501 ORTHO05D009528 3.3e-19 99.0 191 36.6
MD11G1270900 Malus domestica HOM05D007501 ORTHO05D009528 5.6e-19 98.2 185 43.2
Haze_08443 Corylus avellana HOM05D007501 ORTHO05D009528 1.3e-18 97.1 170 36.5
PGR083G0065 Punica granatum HOM05D007501 ORTHO05D009528 4.8e-18 95.1 170 38.2
Prupe.4G155600 Prunus persica HOM05D007501 ORTHO05D009528 1.4e-17 93.6 190 46.8
Manes.15G099000 Manihot esculenta HOM05D007501 ORTHO05D009528 1.8e-17 93.2 191 36.1
CSS0000849 Camellia sinensis var. sinensis HOM05D007501 ORTHO05D009528 2.4e-17 92.8 185 36.2
Duzib213G0875 Durio zibethinus HOM05D007501 ORTHO05D009528 3.1e-17 92.4 180 37.2
RcHm_v2.0_Chr5g0029351 Rosa chinensis HOM05D007501 ORTHO05D009528 5.3e-17 91.7 189 36.0
TWI39G1127 Tripterygium wilfordii HOM05D007501 ORTHO05D009528 5.3e-17 91.7 143 37.8
MD03G1250700 Malus domestica HOM05D007501 ORTHO05D009528 9.0e-17 90.9 160 40.6
Cc05_g10640 Coffea canephora HOM05D007501 ORTHO05D009528 1.2e-16 90.5 192 34.9
vmacro09418 Vaccinium macrocarpon HOM05D007501 ORTHO05D009528 2.0e-16 89.7 158 36.7
FAN21G3657 Fragaria x ananassa HOM05D007501 ORTHO05D009528 7.6e-16 87.8 188 36.2
Potri.001G382800 Populus trichocarpa HOM05D007501 ORTHO05D009528 7.6e-16 87.8 195 34.4
Eucgr.F01372 Eucalyptus grandis HOM05D007501 ORTHO05D009528 1.3e-15 87.0 157 36.9
FvH4_3g17620 Fragaria vesca HOM05D007501 ORTHO05D009528 1.3e-15 87.0 188 36.2
FAN11G3003 Fragaria x ananassa HOM05D007501 ORTHO05D009528 1.3e-15 87.0 188 36.2
FAN25G1377 Fragaria x ananassa HOM05D007501 ORTHO05D009528 1.7e-15 86.7 188 35.6
Cfa019508 Carpinus fangiana HOM05D007501 ORTHO05D009528 2.2e-15 86.3 182 32.4
SalBow8G3616 Salvia bowleyana HOM05D007501 ORTHO05D009528 4.9e-15 85.1 141 36.9
QL08p025249 Quercus lobata HOM05D007501 ORTHO05D009528 1.1e-14 84.0 189 33.3
PGSC0003DMG400021255 Solanum tuberosum HOM05D007501 ORTHO05D009528 1.1e-14 84.0 174 32.8
Nn3g20958 Nelumbo nucifera HOM05D007501 ORTHO05D009528 1.9e-14 83.2 146 37.7
Oeu059251.1 Olea europaea HOM05D007501 ORTHO05D009528 1.9e-14 83.2 182 36.3
arahy.Tifrunner.gnm1.ann1.652QPS Arachis hypogaea HOM05D007501 ORTHO05D009528 3.2e-14 82.4 158 35.4
PSO541G4098 Papaver somniferum HOM05D007501 ORTHO05D009528 3.2e-14 82.4 190 33.2
PSO675G1715 Papaver somniferum HOM05D007501 ORTHO05D009528 5.4e-14 81.6 190 32.6
Aqoxy4G00171 Aquilegia oxysepala HOM05D007501 ORTHO05D009528 7.1e-14 81.3 180 47.8
Sopen10g003430 Solanum pennellii HOM05D007501 ORTHO05D009528 9.3e-14 80.9 172 34.9
Aa31LG8G1980 Aethionema arabicum HOM05D007501 ORTHO05D009528 1.2e-13 80.5 176 31.8
HanXRQChr11g0331231 Helianthus annuus HOM05D007501 ORTHO05D009528 1.2e-13 80.5 175 34.9
Thecc.07G134800 Theobroma cacao HOM05D007501 ORTHO05D009528 1.6e-13 80.1 185 33.5
Solyc10g007490.2 Solanum lycopersicum HOM05D007501 ORTHO05D009528 2.1e-13 79.7 172 34.3
RhsimUnG0206300 Rhododendron simsii HOM05D007501 ORTHO05D009528 2.7e-13 79.3 171 32.7
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 2.7e-13 79.3 149 36.2
Peaxi162Scf01338g00001 Petunia axillaris HOM05D007501 ORTHO05D009528 4.6e-13 78.6 186 29.0
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 4.6e-13 78.6 177 35.0
Glyma.15G210500 Glycine max HOM05D007501 ORTHO05D009528 7.9e-13 77.8 82 52.4
Medtr8g042500 Medicago truncatula HOM05D007501 ORTHO05D009528 1.0e-12 77.4 69 55.1
CARHR089710 Cardamine hirsuta HOM05D007501 ORTHO05D009528 3.0e-12 75.9 173 32.4
Thhalv10021658m.g Eutrema salsugineum HOM05D007501 ORTHO05D009528 3.0e-12 75.9 173 33.5
Lj3g0021891 Lotus japonicus HOM05D007501 ORTHO05D009528 3.0e-12 75.9 70 54.3
DCAR_019618 Daucus carota HOM05D007501 ORTHO05D009528 6.7e-12 74.7 76 52.6
Nitab4.5_0001140g0140 Nicotiana tabacum HOM05D007501 ORTHO05D009528 6.7e-12 74.7 142 37.3
TPR.G16483 Trifolium pratense HOM05D007501 ORTHO05D009528 6.7e-12 74.7 68 54.4
arahy.Tifrunner.gnm1.ann1.5U50EQ Arachis hypogaea HOM05D007501 ORTHO05D009528 8.7e-12 74.3 159 33.3
Glyma.15G211700 Glycine max HOM05D007501 ORTHO05D009528 8.7e-12 74.3 82 51.2
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 1.1e-11 73.9 83 50.6
ECA236G0060 Erigeron canadensis HOM05D007501 ORTHO05D009528 1.5e-11 73.6 178 33.7
C01p49690 Brassica napus HOM05D007501 ORTHO05D009528 1.9e-11 73.2 172 33.7
Sopen07g030380 Solanum pennellii HOM05D007501 ORTHO05D009528 2.5e-11 72.8 140 33.6
AL3G27070 Arabidopsis lyrata HOM05D007501 ORTHO05D009528 3.3e-11 72.4 173 32.4
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 3.3e-11 72.4 186 34.4
AT3G14760 Arabidopsis thaliana HOM05D007501 ORTHO05D009528 4.3e-11 72.0 173 32.4
VMungo1127G2061 Vigna mungo HOM05D007501 ORTHO05D009528 4.3e-11 72.0 69 55.1
BolC1t04925H Brassica oleracea HOM05D007501 ORTHO05D009528 5.6e-11 71.6 177 32.8
BraA01t03953Z Brassica rapa HOM05D007501 ORTHO05D009528 5.6e-11 71.6 177 32.8
Carub.0003s1443 Capsella rubella HOM05D007501 ORTHO05D009528 5.6e-11 71.6 173 32.4
Sp3g12990 Schrenkiella parvula HOM05D007501 ORTHO05D009528 5.6e-11 71.6 174 32.2
Peaxi162Scf00111g00124 Petunia axillaris HOM05D007501 ORTHO05D009528 1.3e-10 70.5 140 32.1
Psat4g135600 Pisum sativum HOM05D007501 ORTHO05D009528 1.6e-10 70.1 87 50.6
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 2.1e-10 69.7 76 50.0
Nitab4.5_0008460g0030 Nicotiana tabacum HOM05D007501 ORTHO05D009528 2.1e-10 69.7 146 34.9
PGSC0003DMG400043590 Solanum tuberosum HOM05D007501 ORTHO05D009528 3.7e-10 68.9 137 34.3
A01p39060 Brassica napus HOM05D007501 ORTHO05D009528 4.8e-10 68.6 175 33.7
CAN.G375.54 Capsicum annuum HOM05D007501 ORTHO05D009528 8.1e-10 67.8 137 35.8
BcaC09g48445 Brassica carinata HOM05D007501 ORTHO05D009528 1.4e-09 67.0 65 52.3
AUR62013946 Chenopodium quinoa HOM05D007501 ORTHO05D009528 5.3e-09 65.1 154 36.4
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 5.3e-09 65.1 159 32.1
AUR62019665 Chenopodium quinoa HOM05D007501 ORTHO05D009528 1.2e-08 63.9 154 42.2
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 1.3e-07 60.5 60 53.3
ATR0681G022 Amborella trichopoda HOM05D007501 ORTHO05D009528 1.4e-06 57.0 47 63.8
EL10Ac4g08429 Beta vulgaris HOM05D007501 ORTHO05D009528 5.5e-06 55.1 34 70.6
Pp3c4_18190 Physcomitrium patens HOM05D035914 ORTHO05D010468 5.5e-06 55.1 51 47.1
Peaxi162Scf00069g01713 Petunia axillaris HOM05D007501 ORTHO05D009528 9.3e-06 54.3 34 64.7


User provided reference genes

Program Settings