Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020964 Sechium edule HOM05D004865 ORTHO05D005949 2.3e-57 225.3 110 100.0
ClCG11G011710 Citrullus lanatus HOM05D004865 ORTHO05D034719 1.3e-25 119.8 110 55.5
Sed0001554 Sechium edule HOM05D004865 ORTHO05D034719 2.5e-24 115.5 109 49.5
Sed0006015 Sechium edule HOM05D004865 ORTHO05D034719 7.3e-24 114.0 109 52.3
MELO3C031484.2 Cucumis melo HOM05D004865 ORTHO05D005949 1.2e-18 96.7 113 48.7
Sed0017379 Sechium edule HOM05D004865 ORTHO05D005949 1.1e-16 90.1 115 47.0
Sed0001119 Sechium edule HOM05D004865 ORTHO05D005949 1.5e-16 89.7 110 40.0
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 6.4e-12 74.3 109 36.7
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 1.2e-10 70.1 105 39.0
CSS0005385 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 2.7e-10 68.9 105 36.2
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 2.7e-10 68.9 109 41.3
CSS0032746 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 4.6e-10 68.2 109 34.9
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.3e-09 66.6 109 36.7
CSS0027528 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.7e-09 66.2 106 35.8
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 1.7e-09 66.2 109 40.4
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.7e-09 66.2 110 34.5
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.9e-09 65.1 106 35.8
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 5.1e-09 64.7 105 36.2
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 5.1e-09 64.7 105 36.2
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 1.1e-08 63.5 106 34.0
AUR62014649 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.5e-08 63.2 105 37.1
Lj6P378T3 Lonicera japonica HOM05D004865 ORTHO05D005949 1.5e-08 63.2 91 44.0
Lj6P379T11 Lonicera japonica HOM05D004865 ORTHO05D005949 1.5e-08 63.2 91 44.0
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.9e-08 62.8 109 36.7
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 3.3e-08 62.0 109 35.8
Lj6P371T8 Lonicera japonica HOM05D004865 ORTHO05D005949 4.3e-08 61.6 91 42.9
Lj6P371T11 Lonicera japonica HOM05D004865 ORTHO05D005949 5.6e-08 61.2 90 43.3
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 9.6e-08 60.5 106 33.0
Sc02g0003580 Simmondsia chinensis HOM05D004865 ORTHO05D005949 9.6e-08 60.5 109 34.9
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 1.6e-07 59.7 109 35.8
MD17G1147700 Malus domestica HOM05D004865 ORTHO05D005949 1.6e-07 59.7 109 35.8
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 2.1e-07 59.3 109 33.9
Hma1.2p1_1768F.1_g301530 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 4.0e-06 55.1 109 32.1
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.0e-06 55.1 109 29.4
AUR62014650 Chenopodium quinoa HOM05D004865 ORTHO05D005949 9.0e-06 53.9 90 33.3
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 9.0e-06 53.9 109 34.9


User provided reference genes

Program Settings