Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 5.3e-102 374.4 195 100.0
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 5.7e-80 301.2 200 81.0
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 3.7e-79 298.5 199 79.4
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 1.3e-76 290.0 201 77.6
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 3.5e-61 238.8 196 65.3
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 1.5e-59 233.4 195 64.6
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.2e-58 230.3 197 61.4
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 6.2e-58 228.0 193 64.2
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 6.2e-58 228.0 176 68.8
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 2.3e-57 226.1 196 62.2
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 2.3e-57 226.1 196 62.2
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 4.0e-57 225.3 202 60.4
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 2.0e-56 223.0 196 62.8
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 3.4e-56 222.2 196 61.7
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 5.8e-56 221.5 196 61.7
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 7.5e-56 221.1 175 70.3
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 2.2e-55 219.5 197 62.4
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 2.2e-55 219.5 196 62.2
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 2.9e-55 219.2 198 60.6
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 4.9e-55 218.4 156 72.4
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 4.9e-55 218.4 202 58.4
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 6.4e-55 218.0 196 61.7
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 8.3e-55 217.6 198 61.6
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 1.1e-54 217.2 207 60.4
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.9e-54 216.5 206 59.2
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 3.2e-54 215.7 193 61.1
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 4.1e-54 215.3 151 72.2
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 7.0e-54 214.5 200 61.0
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 9.2e-54 214.2 172 65.1
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.2e-53 213.8 178 66.9
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 3.5e-53 212.2 197 59.4
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 7.8e-53 211.1 208 59.1
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 1.0e-52 210.7 168 68.5
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 1.0e-52 210.7 209 58.4
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 1.3e-52 210.3 180 64.4
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.7e-52 209.9 196 61.2
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 2.3e-52 209.5 201 59.2
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 2.3e-52 209.5 182 61.0
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 6.6e-52 208.0 204 58.3
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 6.6e-52 208.0 180 61.1
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 8.6e-52 207.6 195 61.5
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.1e-51 207.2 197 60.4
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 1.1e-51 207.2 180 60.6
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.5e-51 206.8 197 60.4
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.5e-51 206.8 197 60.4
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 2.5e-51 206.1 183 62.3
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 3.3e-51 205.7 186 61.3
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 4.3e-51 205.3 162 66.0
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 5.6e-51 204.9 191 59.7
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 5.6e-51 204.9 186 62.4
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 9.5e-51 204.1 180 62.8
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 1.6e-50 203.4 182 61.0
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.1e-50 203.0 200 58.0
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.8e-50 202.6 182 61.5
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 3.6e-50 202.2 206 55.8
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 4.7e-50 201.8 186 61.8
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 4.7e-50 201.8 190 59.5
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 8.1e-50 201.1 174 62.6
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 5.2e-49 198.4 181 61.3
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 5.2e-49 198.4 175 65.1
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 6.8e-49 198.0 198 57.1
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 1.2e-48 197.2 177 62.1
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 1.2e-48 197.2 186 61.3
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 2.0e-48 196.4 211 56.4
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 2.6e-48 196.1 208 56.2
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 2.6e-48 196.1 177 61.6
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 3.4e-48 195.7 207 54.6
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 4.4e-48 195.3 197 56.9
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 7.5e-48 194.5 209 55.0
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 9.9e-48 194.1 173 59.5
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 1.7e-47 193.4 204 54.9
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 6.4e-47 191.4 202 54.5
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 8.3e-47 191.0 203 53.2
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 8.3e-47 191.0 202 55.0
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.1e-46 190.7 190 55.8
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.9e-46 189.9 202 54.5
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.9e-46 189.9 202 54.5
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.9e-46 189.9 202 54.5
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 2.4e-46 189.5 179 59.2
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 2.4e-46 189.5 183 56.3
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 3.2e-46 189.1 197 54.3
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 2.1e-45 186.4 157 63.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 3.5e-45 185.7 159 64.2
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 2.5e-43 179.5 187 53.5
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 4.3e-43 178.7 178 55.6
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 4.3e-43 178.7 180 55.0
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 1.2e-42 177.2 187 54.5
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.6e-42 176.8 175 56.0
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.1e-42 176.4 160 57.5
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 2.1e-42 176.4 194 52.6
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.8e-42 176.0 160 57.5
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 2.8e-42 176.0 186 54.8
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.8e-41 173.3 146 63.7
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 2.4e-41 172.9 185 52.4
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.0e-40 169.9 193 52.8
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 2.6e-40 169.5 170 53.5
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 4.9e-39 165.2 193 47.7
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 5.4e-38 161.8 151 51.7
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 2.1e-37 159.8 190 46.3
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 2.7e-37 159.5 186 46.2
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 2.1e-34 149.8 156 52.6
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 7.8e-29 131.3 142 47.9
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 2.8e-26 122.9 92 65.2
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.1e-25 120.9 192 41.1
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.7e-21 106.3 118 47.5
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 9.6e-19 97.8 160 38.1
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.4e-14 84.0 142 35.2
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 9.3e-14 81.3 87 56.3
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 9.3e-14 81.3 152 28.9
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.6e-13 80.5 117 49.6
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.0e-12 77.8 137 34.3
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.0e-12 76.3 137 33.6
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 5.1e-12 75.5 149 31.5
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 5.1e-12 75.5 139 28.8
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 2.5e-11 73.2 77 51.9
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 3.4e-08 62.8 74 45.9


User provided reference genes

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