Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 1.1e-161 573.2 273 100.0
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 5.1e-119 431.4 244 85.7
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 9.7e-118 427.2 244 83.2
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 5.0e-106 388.3 243 76.1
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.7e-104 382.5 248 73.8
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 2.7e-104 382.5 257 72.4
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 3.0e-103 379.0 248 73.4
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 1.5e-102 376.7 248 72.6
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 2.6e-102 375.9 254 70.9
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 4.4e-102 375.2 245 73.9
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 5.7e-102 374.8 252 71.0
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 2.8e-101 372.5 258 70.2
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 6.3e-101 371.3 246 72.8
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 6.3e-101 371.3 249 73.1
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 1.4e-100 370.2 241 73.9
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 1.8e-100 369.8 242 73.1
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 2.4e-100 369.4 248 73.0
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 3.1e-100 369.0 252 71.4
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 3.1e-100 369.0 292 63.7
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 1.2e-99 367.1 243 70.8
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 1.6e-99 366.7 242 73.1
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 2.0e-99 366.3 249 69.9
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 4.5e-99 365.2 231 72.7
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 5.9e-99 364.8 239 71.5
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 7.7e-99 364.4 237 73.8
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 2.9e-98 362.5 245 71.8
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 5.0e-98 361.7 239 72.0
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 5.0e-98 361.7 244 71.3
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 6.5e-98 361.3 243 68.3
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 1.5e-97 360.1 249 70.3
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 1.9e-97 359.8 242 70.7
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 2.5e-97 359.4 242 71.1
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.2e-97 359.0 249 68.7
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 4.2e-97 358.6 242 71.1
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 7.2e-97 357.8 247 66.8
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 7.2e-97 357.8 245 70.6
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 2.1e-96 356.3 243 70.8
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 3.6e-96 355.5 245 70.2
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 6.1e-96 354.8 308 59.7
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 6.1e-96 354.8 250 67.6
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 8.0e-96 354.4 243 70.4
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 1.4e-95 353.6 243 68.7
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 1.8e-95 353.2 240 70.0
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 1.8e-95 353.2 240 68.8
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 1.8e-95 353.2 241 71.4
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 2.3e-95 352.8 245 69.0
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 3.0e-95 352.4 247 68.4
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 5.2e-95 351.7 254 66.1
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 5.2e-95 351.7 245 68.6
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 6.7e-95 351.3 244 68.9
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 6.7e-95 351.3 245 67.8
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 8.8e-95 350.9 239 70.3
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.5e-94 350.1 245 70.2
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 2.0e-94 349.7 245 69.0
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 2.6e-94 349.4 247 67.6
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 2.6e-94 349.4 245 69.0
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 5.7e-94 348.2 241 69.3
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 7.5e-94 347.8 243 68.7
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 7.5e-94 347.8 243 68.7
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 9.7e-94 347.4 242 69.4
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 9.7e-94 347.4 259 67.2
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 9.7e-94 347.4 248 66.9
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 2.2e-93 346.3 251 65.7
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 2.2e-93 346.3 247 68.0
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 2.2e-93 346.3 193 85.0
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 6.3e-93 344.7 243 67.9
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 8.3e-93 344.4 248 67.7
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 1.8e-92 343.2 249 67.9
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 5.3e-92 341.7 242 67.4
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 2.7e-91 339.3 243 69.5
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 7.7e-91 337.8 248 67.3
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 5.5e-89 331.6 232 65.5
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 3.6e-88 328.9 258 61.6
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 4.0e-87 325.5 241 69.3
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 1.3e-85 320.5 206 72.3
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 2.2e-85 319.7 240 62.9
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 2.7e-83 312.8 252 64.7
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 7.7e-83 311.2 268 60.1
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.1e-81 307.4 240 64.6
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 7.2e-81 304.7 194 74.7
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 1.2e-80 303.9 195 73.3
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 8.0e-80 301.2 299 53.8
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 1.8e-79 300.1 254 57.1
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 2.0e-78 296.6 251 60.6
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 4.1e-76 288.9 279 52.3
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 2.3e-74 283.1 259 57.9
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 3.9e-74 282.3 253 54.5
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 3.6e-72 275.8 177 73.4
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 6.1e-72 275.0 178 71.3
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.5e-70 270.4 247 57.9
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 2.4e-68 263.1 274 51.5
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 1.2e-67 260.8 210 59.0
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 3.0e-66 256.1 267 50.6
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 1.1e-65 254.2 283 46.6
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 9.5e-65 251.1 214 56.5
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 3.6e-64 249.2 290 50.0
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 1.9e-57 226.9 251 49.4
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 5.8e-54 215.3 136 72.8
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 7.3e-49 198.4 134 70.1
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 3.4e-46 189.5 179 54.2
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 1.1e-39 167.9 115 69.6
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 4.9e-29 132.5 85 72.9
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 1.9e-25 120.6 95 64.2
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 8.4e-21 105.1 89 58.4
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 2.5e-12 77.0 40 82.5
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 2.4e-07 60.5 207 22.2
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 4.1e-07 59.7 121 29.8
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 2.0e-06 57.4 120 27.5
Pp3c26_2100 Physcomitrium patens HOM05D001602 ORTHO05D001470 4.5e-06 56.2 147 25.2


User provided reference genes

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