Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020823 Sechium edule HOM05D001521 ORTHO05D001342 1.2e-97 359.8 172 100.0
Sed0027833 Sechium edule HOM05D001521 ORTHO05D001342 2.9e-35 152.5 158 49.4
CsaV3_6G006900 Cucumis sativus L. HOM05D001521 ORTHO05D001342 4.6e-25 118.6 161 37.9
CsaV3_6G006880 Cucumis sativus L. HOM05D001521 ORTHO05D001342 3.3e-23 112.5 165 36.4
CsaV3_6G006870 Cucumis sativus L. HOM05D001521 ORTHO05D001342 8.2e-22 107.8 152 38.8
MELO3C022437.2 Cucumis melo HOM05D001521 ORTHO05D001342 3.1e-21 105.9 152 38.2
MELO3C022436.2 Cucumis melo HOM05D001521 ORTHO05D001342 5.9e-20 101.7 153 37.9
Cpa.g.sc264.7 Carica papaya HOM05D001521 ORTHO05D001342 7.7e-20 101.3 152 36.2
CsaV3_6G006860 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.0e-19 100.9 165 35.8
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.0e-19 100.9 153 37.9
TAR371G0196 Trochodendron aralioides HOM05D001521 ORTHO05D001342 6.5e-19 98.2 153 37.3
Prupe.2G087400 Prunus persica HOM05D001521 ORTHO05D001342 8.5e-19 97.8 157 36.9
TAR383G0835 Trochodendron aralioides HOM05D001521 ORTHO05D001342 2.5e-18 96.3 155 38.1
TAR636G2451 Trochodendron aralioides HOM05D001521 ORTHO05D001342 2.5e-18 96.3 149 36.2
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 3.2e-18 95.9 153 35.9
Cpa.g.sc264.8 Carica papaya HOM05D001521 ORTHO05D001342 5.5e-18 95.1 152 33.6
Sed0023711 Sechium edule HOM05D001521 ORTHO05D001342 7.2e-18 94.7 152 34.9
Lju124C11T1 Lonicera japonica HOM05D001521 ORTHO05D001342 3.6e-17 92.4 158 36.1
MELO3C022429.2 Cucumis melo HOM05D001521 ORTHO05D001342 7.9e-17 91.3 155 31.6
Sc19g0001570 Simmondsia chinensis HOM05D001521 ORTHO05D001342 7.9e-17 91.3 146 32.2
GSVIVG01028618001 Vitis vinifera HOM05D001521 ORTHO05D001342 7.9e-17 91.3 152 34.9
ClCG06G001060 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.4e-16 90.5 155 32.3
Sed0020102 Sechium edule HOM05D001521 ORTHO05D001342 1.4e-16 90.5 156 33.3
GSVIVG01028606001 Vitis vinifera HOM05D001521 ORTHO05D001342 1.4e-16 90.5 152 34.9
CsaV3_6G006990 Cucumis sativus L. HOM05D001521 ORTHO05D001342 2.3e-16 89.7 156 33.3
Dinv05622 Davidia involucrata HOM05D001521 ORTHO05D001342 3.0e-16 89.4 140 37.9
CsaV3_6G006970 Cucumis sativus L. HOM05D001521 ORTHO05D001342 3.9e-16 89.0 155 31.6
Dinv04994 Davidia involucrata HOM05D001521 ORTHO05D001342 6.7e-16 88.2 140 37.9
Dinv37718 Davidia involucrata HOM05D001521 ORTHO05D001342 6.7e-16 88.2 125 36.8
CSS0010403 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 8.8e-16 87.8 158 34.2
ClCG06G001040 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.1e-15 87.4 158 34.8
Rhsim05G0010000 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.5e-15 87.0 183 32.8
Sed0024723 Sechium edule HOM05D001521 ORTHO05D001342 1.5e-15 87.0 151 33.8
Cpa.g.sc83.17 Carica papaya HOM05D001521 ORTHO05D001342 2.0e-15 86.7 155 34.2
Rhsim05G0011700 Rhododendron simsii HOM05D001521 ORTHO05D001342 2.6e-15 86.3 171 33.3
CSS0049728 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 3.3e-15 85.9 151 34.4
Rhsim08G0035600 Rhododendron simsii HOM05D001521 ORTHO05D001342 3.3e-15 85.9 152 36.8
RcHm_v2.0_Chr2g0163671 Rosa chinensis HOM05D001521 ORTHO05D001342 3.3e-15 85.9 158 32.3
Lj1P1067T12 Lonicera japonica HOM05D001521 ORTHO05D001342 4.4e-15 85.5 153 35.9
ClCG03G004470 Citrullus lanatus HOM05D001521 ORTHO05D001342 5.7e-15 85.1 166 34.3
Prupe.2G097700 Prunus persica HOM05D001521 ORTHO05D001342 5.7e-15 85.1 157 34.4
MD03G1201400 Malus domestica HOM05D001521 ORTHO05D001342 9.7e-15 84.3 160 35.0
Cpa.g.sc83.19 Carica papaya HOM05D001521 ORTHO05D001342 1.7e-14 83.6 155 32.9
Lj1C599T0 Lonicera japonica HOM05D001521 ORTHO05D001342 2.2e-14 83.2 160 35.6
Rhsim05G0009700 Rhododendron simsii HOM05D001521 ORTHO05D001342 2.2e-14 83.2 153 35.3
Hma1.2p1_0439F.1_g153190 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 2.8e-14 82.8 172 33.1
Lj1C599T6 Lonicera japonica HOM05D001521 ORTHO05D001342 3.7e-14 82.4 154 32.5
Sed0017923 Sechium edule HOM05D001521 ORTHO05D001342 3.7e-14 82.4 153 32.7
CSS0039569 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 4.8e-14 82.0 162 30.9
Cpa.g.c44888 Carica papaya HOM05D001521 ORTHO05D001342 6.3e-14 81.6 152 31.6
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 6.3e-14 81.6 152 31.6
Hma1.2p1_1715F.1_g299020 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 6.3e-14 81.6 150 36.0
Sed0024914 Sechium edule HOM05D001521 ORTHO05D001342 1.1e-13 80.9 160 30.6
MELO3C022431.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.4e-13 80.5 154 31.8
Cpa.g.sc567.1 Carica papaya HOM05D001521 ORTHO05D001342 1.8e-13 80.1 152 30.3
Sed0017368 Sechium edule HOM05D001521 ORTHO05D001342 1.8e-13 80.1 153 32.0
Rhsim05G0011800 Rhododendron simsii HOM05D001521 ORTHO05D001342 2.4e-13 79.7 158 32.3
Sed0023613 Sechium edule HOM05D001521 ORTHO05D001342 4.1e-13 79.0 154 29.9
Cpa.g.sc83.14 Carica papaya HOM05D001521 ORTHO05D001342 5.3e-13 78.6 155 31.6
Rhsim01G0106900 Rhododendron simsii HOM05D000041 ORTHO05D000452 5.3e-13 78.6 142 31.7
Sed0027182 Sechium edule HOM05D001521 ORTHO05D001342 9.1e-13 77.8 150 28.7
MELO3C022255.2 Cucumis melo HOM05D001521 ORTHO05D001342 2.0e-12 76.6 153 31.4
Sed0003936 Sechium edule HOM05D001521 ORTHO05D001342 2.0e-12 76.6 152 28.3
MELO3C022430.2 Cucumis melo HOM05D001521 ORTHO05D001342 3.4e-12 75.9 154 31.2
FAN05G4953 Fragaria x ananassa HOM05D001521 ORTHO05D001342 5.9e-12 75.1 146 30.8
RcHm_v2.0_Chr2g0163591 Rosa chinensis HOM05D001521 ORTHO05D001342 5.9e-12 75.1 165 29.7
Cpa.g.sc125.2 Carica papaya HOM05D001521 ORTHO05D001342 7.7e-12 74.7 130 33.8
ClCG06G000900 Citrullus lanatus HOM05D001521 ORTHO05D001342 7.7e-12 74.7 83 41.0
CsaV3_6G006920 Cucumis sativus L. HOM05D001521 ORTHO05D001342 7.7e-12 74.7 164 29.9
CsaV3_6G006980 Cucumis sativus L. HOM05D001521 ORTHO05D001342 7.7e-12 74.7 154 33.8
FAN09G0517 Fragaria x ananassa HOM05D001521 ORTHO05D001342 7.7e-12 74.7 155 28.4
RcHm_v2.0_Chr2g0163741 Rosa chinensis HOM05D001521 ORTHO05D001342 7.7e-12 74.7 171 31.0
RcHm_v2.0_Chr3g0479441 Rosa chinensis HOM05D001521 ORTHO05D001342 7.7e-12 74.7 161 29.2
CsaV3_6G006750 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.0e-11 74.3 151 29.8
Lj6P274T9 Lonicera japonica HOM05D001521 ORTHO05D001342 1.0e-11 74.3 83 48.2
RcHm_v2.0_Chr2g0163691 Rosa chinensis HOM05D001521 ORTHO05D001342 1.0e-11 74.3 153 30.7
AUR62018482 Chenopodium quinoa HOM05D001521 ORTHO05D001342 1.7e-11 73.6 139 31.7
FAN05G0146 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.7e-11 73.6 142 31.7
FAN05G2842 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.7e-11 73.6 144 30.6
RcHm_v2.0_Chr1g0336971 Rosa chinensis HOM05D001521 ORTHO05D001342 1.7e-11 73.6 143 30.8
Cpa.g.sc1831.1 Carica papaya HOM05D001521 ORTHO05D001342 2.2e-11 73.2 154 31.2
Prupe.2G097800 Prunus persica HOM05D001521 ORTHO05D001342 2.2e-11 73.2 173 30.6
Rhsim01G0107000 Rhododendron simsii HOM05D000041 ORTHO05D000061 2.9e-11 72.8 143 31.5
Rhsim08G0106700 Rhododendron simsii HOM05D000041 ORTHO05D000452 2.9e-11 72.8 143 31.5
MELO3C022450.2 Cucumis melo HOM05D001521 ORTHO05D001342 3.8e-11 72.4 151 31.1
Lj9A162T18 Lonicera japonica HOM05D001521 ORTHO05D001342 3.8e-11 72.4 131 29.8
Sed0028148 Sechium edule HOM05D001521 ORTHO05D001342 6.5e-11 71.6 152 27.6
FvH4_6g05700 Fragaria vesca HOM05D001521 ORTHO05D001342 8.5e-11 71.2 82 39.0
FAN14G2703 Fragaria x ananassa HOM05D001521 ORTHO05D001342 8.5e-11 71.2 82 39.0
RcHm_v2.0_Chr2g0163631 Rosa chinensis HOM05D001521 ORTHO05D001342 8.5e-11 71.2 169 28.4
Rhsim05G0011600 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.1e-10 70.9 88 45.5
Sed0026868 Sechium edule HOM05D001521 ORTHO05D001342 1.1e-10 70.9 154 31.2
MELO3C022434.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.4e-10 70.5 167 29.9
Gohir.A02G009180 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.4e-10 70.5 153 32.7
Gohir.D02G009600 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.4e-10 70.5 153 33.3
Sed0017234 Sechium edule HOM05D001521 ORTHO05D001342 1.4e-10 70.5 153 27.5
FvH4_5g03090 Fragaria vesca HOM05D001521 ORTHO05D001342 1.9e-10 70.1 92 41.3
Rhsim05G0011200 Rhododendron simsii HOM05D001521 ORTHO05D001342 2.5e-10 69.7 171 31.6
RcHm_v2.0_Chr5g0072501 Rosa chinensis HOM05D001521 ORTHO05D001342 2.5e-10 69.7 137 29.9
ClCG06G000920 Citrullus lanatus HOM05D001521 ORTHO05D001342 3.2e-10 69.3 151 32.5
FAN08G2396 Fragaria x ananassa HOM05D001521 ORTHO05D001342 4.2e-10 68.9 91 39.6
Ah.06g190240 Amaranthus hybridus HOM05D001521 ORTHO05D001342 5.5e-10 68.6 147 26.5
FAN13G2871 Fragaria x ananassa HOM05D001521 ORTHO05D001342 5.5e-10 68.6 91 39.6
Gohir.D02G009550 Gossypium hirsutum HOM05D001521 ORTHO05D001342 5.5e-10 68.6 153 31.4
RcHm_v2.0_Chr2g0163661 Rosa chinensis HOM05D001521 ORTHO05D001342 5.5e-10 68.6 169 28.4
Gorai.005G011400 Gossypium raimondii HOM05D001521 ORTHO05D001342 7.2e-10 68.2 153 31.4
Gorai.005G011800 Gossypium raimondii HOM05D001521 ORTHO05D001342 7.2e-10 68.2 153 31.4
Rhsim05G0010100 Rhododendron simsii HOM05D001521 ORTHO05D001342 7.2e-10 68.2 84 46.4
RcHm_v2.0_Chr2g0163571 Rosa chinensis HOM05D001521 ORTHO05D001342 7.2e-10 68.2 153 30.7
Gorai.005G011900 Gossypium raimondii HOM05D001521 ORTHO05D001342 9.4e-10 67.8 153 32.0
PSO409G0016 Papaver somniferum HOM05D001521 ORTHO05D001342 1.2e-09 67.4 148 29.7
Rhsim05G0011500 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.6e-09 67.0 88 45.5
FAN14G0309 Fragaria x ananassa HOM05D001521 ORTHO05D001342 2.1e-09 66.6 162 27.8
FvH4_6g45770 Fragaria vesca HOM05D001521 ORTHO05D001342 2.7e-09 66.2 162 27.8
PSO063G1253 Papaver somniferum HOM05D001521 ORTHO05D001342 2.7e-09 66.2 150 29.3
ClCG06G001050 Citrullus lanatus HOM05D001521 ORTHO05D001342 3.6e-09 65.9 154 29.2
PSO104G0120 Papaver somniferum HOM05D001521 ORTHO05D001342 3.6e-09 65.9 155 33.5
FAN09G4470 Fragaria x ananassa HOM05D001521 ORTHO05D001342 4.7e-09 65.5 142 30.3
Gohir.D02G009366 Gossypium hirsutum HOM05D001521 ORTHO05D001342 4.7e-09 65.5 153 30.7
FAN05G2510 Fragaria x ananassa HOM05D001521 ORTHO05D001342 6.1e-09 65.1 151 26.5
FvH4_6g45591 Fragaria vesca HOM05D001521 ORTHO05D001342 1.4e-08 63.9 82 36.6
Rhsim05G0011300 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.4e-08 63.9 91 46.2
MD02G1240200 Malus domestica HOM05D001521 ORTHO05D001342 1.8e-08 63.5 104 41.3
EL10As2g23150 Beta vulgaris HOM05D001521 ORTHO05D001342 2.3e-08 63.2 82 36.6
FvH4_6g46030 Fragaria vesca HOM05D001521 ORTHO05D001342 2.3e-08 63.2 160 27.5
FvH4_6g46040 Fragaria vesca HOM05D001521 ORTHO05D001342 2.3e-08 63.2 162 27.2
FAN09G4373 Fragaria x ananassa HOM05D001521 ORTHO05D001342 3.0e-08 62.8 69 42.0
PSO104G0194 Papaver somniferum HOM05D001521 ORTHO05D001342 3.9e-08 62.4 149 25.5
PSO104G0263 Papaver somniferum HOM05D001521 ORTHO05D001342 3.9e-08 62.4 140 30.7
EL10Ac6g13883 Beta vulgaris HOM05D001521 ORTHO05D001342 5.2e-08 62.0 82 35.4
RcHm_v2.0_Chr1g0337031 Rosa chinensis HOM05D001521 ORTHO05D001342 8.8e-08 61.2 100 37.0
PSO104G0024 Papaver somniferum HOM05D001521 ORTHO05D001342 1.1e-07 60.8 136 32.4
FAN08G1602 Fragaria x ananassa HOM05D000011 ORTHO05D002639 2.0e-07 60.1 87 36.8
FAN08G2489 Fragaria x ananassa HOM05D000011 ORTHO05D002639 2.0e-07 60.1 87 36.8
PSO421G0241 Papaver somniferum HOM05D001521 ORTHO05D001342 2.0e-07 60.1 132 28.0
CANSAT54G0454 Cannabis sativa HOM05D001521 ORTHO05D001342 2.6e-07 59.7 164 26.8
RcHm_v2.0_Chr5g0011821 Rosa chinensis HOM05D001521 ORTHO05D001342 2.6e-07 59.7 113 30.1
RcHm_v2.0_Chr5g0011831 Rosa chinensis HOM05D001521 ORTHO05D001342 2.6e-07 59.7 113 30.1
RcHm_v2.0_Chr5g0011841 Rosa chinensis HOM05D001521 ORTHO05D001342 2.6e-07 59.7 113 30.1
FAN08G2871 Fragaria x ananassa HOM05D000011 ORTHO05D002639 3.3e-07 59.3 86 37.2
FAN02G0887 Fragaria x ananassa HOM05D001521 ORTHO05D001342 4.4e-07 58.9 85 32.9
FAN09G4306 Fragaria x ananassa HOM05D001521 ORTHO05D001342 5.7e-07 58.5 90 33.3
PSO541G3315 Papaver somniferum HOM05D001521 ORTHO05D001342 7.4e-07 58.2 139 28.8
Hma1.2p1_0033F.1_g020950 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.3e-06 57.4 54 53.7
PSO541G4178 Papaver somniferum HOM05D001521 ORTHO05D001342 1.3e-06 57.4 146 27.4
PSO541G0681 Papaver somniferum HOM05D001521 ORTHO05D001342 1.7e-06 57.0 139 27.3
PSO421G0572 Papaver somniferum HOM05D001521 ORTHO05D001342 2.2e-06 56.6 168 25.6
PSO782G5012 Papaver somniferum HOM05D001521 ORTHO05D001342 6.3e-06 55.1 154 26.0
PSO170G3049 Papaver somniferum HOM05D001521 ORTHO05D001342 8.2e-06 54.7 154 26.0
Rhsim01G0221700 Rhododendron simsii HOM05D001521 ORTHO05D001342 8.2e-06 54.7 122 26.2


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