Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020761 Sechium edule HOM05D009842 ORTHO05D011134 1.0e-91 340.1 175 100.0
ClCG02G013580 Citrullus lanatus HOM05D009842 ORTHO05D011134 3.0e-72 275.4 175 81.7
MELO3C023815.2 Cucumis melo HOM05D009842 ORTHO05D011134 5.9e-68 261.2 172 77.3
CsaV3_5G006590 Cucumis sativus L. HOM05D009842 ORTHO05D011134 7.7e-68 260.8 175 77.7
PGR142G3647 Punica granatum HOM05D009842 ORTHO05D011134 4.5e-44 181.8 167 55.7
Sopen05g033310 Solanum pennellii HOM05D009842 ORTHO05D011134 5.0e-43 178.3 175 56.6
PGSC0003DMG400023509 Solanum tuberosum HOM05D009842 ORTHO05D011134 5.0e-43 178.3 176 55.7
Solyc05g054840.3 Solanum lycopersicum HOM05D009842 ORTHO05D011134 1.2e-41 173.7 175 55.4
Dinv31397 Davidia involucrata HOM05D009842 ORTHO05D011134 1.8e-40 169.9 167 56.9
Nitab4.5_0000914g0210 Nicotiana tabacum HOM05D009842 ORTHO05D011134 6.8e-40 167.9 174 52.9
Prupe.2G225500 Prunus persica HOM05D009842 ORTHO05D011134 2.0e-39 166.4 167 56.3
Nitab4.5_0011080g0030 Nicotiana tabacum HOM05D000454 ORTHO05D000591 2.6e-39 166.0 174 52.3
MD01G1118400 Malus domestica HOM05D009842 ORTHO05D011134 1.1e-37 160.6 167 55.1
Actinidia38217 Actinidia chinensis HOM05D009842 ORTHO05D011134 1.6e-36 156.8 176 51.7
TAR636G0871 Trochodendron aralioides HOM05D009842 ORTHO05D011134 5.0e-35 151.8 170 52.4
TWI38G0364 Tripterygium wilfordii HOM05D009842 ORTHO05D011134 3.3e-34 149.1 147 53.1
Cc02_g08540 Coffea canephora HOM05D009842 ORTHO05D011134 4.3e-34 148.7 182 48.4
PSO384G1346 Papaver somniferum HOM05D009842 ORTHO05D011134 5.6e-34 148.3 169 50.3
Nn2g10535 Nelumbo nucifera HOM05D009842 ORTHO05D011134 1.8e-32 143.3 182 48.9
PSO339G5653 Papaver somniferum HOM05D009842 ORTHO05D011134 8.9e-32 141.0 169 47.9
CSS0009421 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 3.3e-26 122.5 164 47.6
CSS0024730 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 2.3e-24 116.3 182 44.5
HPP92_006590 Vanilla planifolia HOM05D009842 ORTHO05D011134 9.9e-15 84.3 165 36.4
SMO165G0144 Selaginella moellendorffii HOM05D013267 ORTHO05D011134 8.4e-14 81.3 221 29.9
Zm00001eb265980 Zea mays HOM05D009842 ORTHO05D011134 8.4e-14 81.3 163 35.0
Os05g0120800 Oryza sativa ssp. japonica HOM05D009842 ORTHO05D011134 3.2e-13 79.3 154 35.1
Mapoly0003s0076 Marchantia polymorpha HOM05D013267 ORTHO05D011134 9.2e-13 77.8 219 29.7
Peaxi162Scf00015g02512 Petunia axillaris HOM05D009842 ORTHO05D011134 2.7e-12 76.3 174 32.2
AagrBONN_evm.TU.Sc2ySwM_368.1565 Anthoceros agrestis HOM05D013267 ORTHO05D011134 6.2e-09 65.1 220 25.9
Actinidia02992 Actinidia chinensis HOM05D009842 ORTHO05D011134 1.2e-07 60.8 178 28.7
MCO02G316 Micromonas commoda HOM05D013267 ORTHO05D011134 1.5e-07 60.5 220 26.8
Cre16.g688450 Chlamydomonas reinhardtii HOM05D013267 ORTHO05D011134 2.2e-06 56.6 214 25.7


User provided reference genes

Program Settings