Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 1.1e-176 623.2 320 100.0
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 4.0e-123 445.3 326 76.7
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 4.8e-116 421.8 318 74.8
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 9.3e-112 407.5 315 73.0
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 1.4e-51 207.6 319 45.1
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 1.8e-51 207.2 316 45.6
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 1.1e-48 198.0 301 45.8
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 1.2e-47 194.5 309 45.0
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 2.1e-47 193.7 308 44.5
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 3.0e-46 189.9 305 44.9
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 2.6e-45 186.8 312 44.6
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 3.7e-44 183.0 306 44.1
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 1.1e-43 181.4 300 45.0
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 1.6e-42 177.6 316 44.9
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 1.6e-42 177.6 324 42.9
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 2.0e-42 177.2 297 43.4
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 2.7e-42 176.8 331 40.2
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 1.3e-41 174.5 331 42.9
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 6.6e-41 172.2 322 38.5
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 8.6e-41 171.8 315 41.0
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 5.6e-40 169.1 322 43.5
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 8.0e-39 165.2 367 37.9
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-38 164.9 331 38.4
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 2.3e-38 163.7 342 39.5
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 1.2e-37 161.4 355 36.6
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 1.5e-37 161.0 353 37.7
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 3.4e-37 159.8 314 38.9
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 3.4e-37 159.8 314 38.9
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 5.8e-37 159.1 317 40.1
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 7.5e-37 158.7 318 38.4
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 1.3e-36 157.9 298 41.6
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 1.7e-36 157.5 243 45.7
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 2.2e-36 157.1 297 40.1
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 3.7e-36 156.4 316 38.6
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 6.4e-36 155.6 329 38.6
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 2.4e-35 153.7 293 41.0
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 3.2e-35 153.3 316 38.3
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 7.0e-35 152.1 326 39.0
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 9.2e-35 151.8 318 37.4
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 2.0e-34 150.6 279 42.3
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 2.0e-34 150.6 308 39.3
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 1.7e-33 147.5 279 41.9
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 2.3e-33 147.1 307 40.7
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 2.3e-33 147.1 311 37.6
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 3.9e-33 146.4 339 36.6
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 5.0e-33 146.0 339 36.3
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 5.0e-33 146.0 279 41.9
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 6.6e-33 145.6 319 38.6
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 8.6e-33 145.2 341 37.0
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 8.6e-33 145.2 355 36.1
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.1e-32 144.8 299 40.8
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 1.9e-32 144.1 355 35.5
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.3e-32 143.3 319 37.3
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 1.6e-31 141.0 245 41.6
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.8e-31 140.2 314 36.9
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 2.8e-31 140.2 314 38.9
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 4.0e-30 136.3 314 37.9
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 5.2e-30 136.0 326 36.5
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 8.9e-30 135.2 317 35.3
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.2e-29 134.8 169 50.9
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 3.4e-29 133.3 252 40.5
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 4.4e-29 132.9 314 36.9
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 4.4e-29 132.9 299 39.5
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 1.7e-28 131.0 300 37.3
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 2.9e-28 130.2 316 35.8
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 1.1e-27 128.3 341 35.8
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 7.1e-27 125.6 313 35.1
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 2.1e-26 124.0 307 36.8
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 3.5e-26 123.2 304 37.8
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 1.3e-25 121.3 293 37.5
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 5.1e-25 119.4 181 42.5
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 5.6e-24 115.9 297 37.0
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 7.3e-24 115.5 299 36.5
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 9.5e-24 115.2 301 38.2
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 9.5e-24 115.2 187 42.2
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 1.6e-23 114.4 311 37.9
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 1.1e-22 111.7 310 37.1
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 5.2e-22 109.4 303 33.0
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 6.8e-22 109.0 307 36.2
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 5.8e-21 105.9 149 43.0
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 1.3e-20 104.8 295 37.3
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 1.7e-20 104.4 305 36.7
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 8.4e-20 102.1 297 36.0
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 1.1e-19 101.7 296 37.8
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 4.1e-19 99.8 295 38.3
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 2.1e-18 97.4 303 35.3
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 2.1e-18 97.4 127 46.5
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 2.1e-18 97.4 125 47.2
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 8.7e-17 92.0 139 41.7
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 1.5e-16 91.3 301 32.2
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 3.1e-14 83.6 232 34.9
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 1.7e-12 77.8 96 43.8
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 4.6e-10 69.7 126 39.7
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 6.6e-09 65.9 72 48.6
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 3.3e-08 63.5 63 49.2
Actinidia04644 Actinidia chinensis HOM05D007360 ORTHO05D008235 4.3e-08 63.2 60 50.0
Actinidia28468 Actinidia chinensis HOM05D007360 ORTHO05D008235 4.3e-08 63.2 60 50.0
Actinidia33720 Actinidia chinensis HOM05D007360 ORTHO05D008235 4.3e-08 63.2 60 50.0
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 3.6e-07 60.1 119 37.0


User provided reference genes

Program Settings