Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 1.8e-226 788.9 387 100.0
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 2.1e-182 642.5 393 79.9
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 2.3e-181 639.0 403 77.2
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 2.0e-156 556.2 385 72.5
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 3.5e-129 465.7 390 57.7
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 3.8e-128 462.2 388 58.0
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 6.6e-120 434.9 360 56.4
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 3.3e-119 432.6 355 57.7
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 3.6e-118 429.1 388 55.4
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 7.5e-116 421.4 375 54.7
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 1.9e-114 416.8 358 55.0
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 1.9e-114 416.8 385 54.8
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 2.7e-113 412.9 393 53.2
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.7e-113 412.9 379 54.6
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 6.0e-113 411.8 371 54.2
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 2.3e-112 409.8 375 55.5
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 6.6e-112 408.3 357 55.5
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 8.6e-112 407.9 373 53.6
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 3.3e-111 406.0 374 53.2
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 7.3e-111 404.8 395 52.7
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 7.3e-111 404.8 375 53.9
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 1.6e-110 403.7 354 54.5
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 3.6e-110 402.5 373 53.1
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 3.1e-109 399.4 384 50.8
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 3.4e-108 396.0 386 52.8
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 7.5e-108 394.8 386 51.0
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 1.3e-107 394.0 348 54.0
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 1.7e-107 393.7 373 50.4
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.7e-107 393.7 386 51.0
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 1.1e-106 391.0 370 51.9
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 1.1e-106 391.0 375 52.5
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 1.4e-106 390.6 375 52.8
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 4.1e-106 389.0 360 52.8
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 5.4e-106 388.7 390 52.3
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 5.4e-106 388.7 370 51.9
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 1.6e-105 387.1 367 51.8
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 2.7e-105 386.3 365 52.9
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 7.8e-105 384.8 448 44.9
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 8.6e-104 381.3 370 51.6
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 1.6e-102 377.1 356 51.7
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 3.6e-102 375.9 364 50.8
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 6.8e-101 371.7 366 49.7
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 1.5e-100 370.5 356 50.8
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 1.5e-100 370.5 361 51.2
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 2.0e-100 370.2 356 50.8
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 2.6e-100 369.8 367 49.9
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 3.4e-100 369.4 371 49.3
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 3.4e-100 369.4 356 50.6
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 4.4e-100 369.0 360 51.4
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 5.8e-100 368.6 367 49.6
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 9.9e-100 367.9 361 50.7
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 3.8e-99 365.9 368 49.2
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 8.4e-99 364.8 381 47.2
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 1.4e-98 364.0 381 49.3
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 1.2e-97 360.9 340 51.2
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 1.2e-97 360.9 366 48.9
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 2.1e-97 360.1 377 47.7
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.3e-96 357.5 379 48.0
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 1.7e-96 357.1 391 48.8
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 6.6e-96 355.1 357 49.0
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 4.3e-95 352.4 369 49.3
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 7.3e-95 351.7 361 50.7
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 1.2e-94 350.9 377 47.7
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 6.2e-94 348.6 345 47.8
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 6.2e-94 348.6 367 50.1
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 8.1e-94 348.2 355 48.2
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 8.1e-94 348.2 300 54.7
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 1.1e-93 347.8 371 48.5
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 1.1e-93 347.8 368 47.6
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 9.0e-93 344.7 367 50.1
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 2.6e-92 343.2 360 50.0
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 5.8e-92 342.0 373 45.8
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 2.2e-91 340.1 376 44.7
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 2.2e-91 340.1 342 47.1
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 2.4e-90 336.7 358 45.3
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 4.2e-90 335.9 349 48.7
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 2.1e-89 333.6 360 46.4
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 3.5e-89 332.8 372 45.7
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 3.5e-89 332.8 380 44.2
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 9.6e-87 324.7 369 44.2
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 1.3e-86 324.3 384 43.0
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 3.6e-86 322.8 398 44.7
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 6.9e-85 318.5 334 48.5
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 2.7e-81 306.6 380 44.7
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 1.0e-80 304.7 318 47.8
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 3.9e-80 302.8 356 39.6
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 5.6e-79 298.9 269 53.9
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 8.1e-78 295.0 336 42.9
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 1.3e-70 271.2 456 33.6
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 2.8e-70 270.0 425 38.6
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 8.2e-70 268.5 243 53.1
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.2e-60 238.0 271 46.9
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 2.9e-59 233.4 275 42.2
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 4.2e-58 229.6 313 39.3
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 7.2e-58 228.8 181 61.9
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 2.7e-57 226.9 355 36.9
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 2.0e-55 220.7 357 37.0
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 5.3e-53 212.6 193 49.7
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 6.9e-53 212.2 236 43.6
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.2e-52 211.5 203 50.7
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.8e-51 206.5 238 45.4
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.5e-47 194.5 299 38.8
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.0e-39 167.5 328 33.5
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 6.3e-38 162.5 227 40.1
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 3.2e-34 150.2 163 48.5
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 4.2e-34 149.8 245 31.8
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.2e-33 148.3 113 62.8
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 1.6e-28 131.3 119 48.7
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 8.5e-27 125.6 238 34.5
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 1.1e-26 125.2 182 36.3
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 2.6e-23 114.0 239 26.8
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 2.7e-20 104.0 133 45.9
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 3.5e-20 103.6 275 30.5
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 6.1e-17 92.8 84 46.4
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 2.0e-15 87.8 130 36.2
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 1.7e-14 84.7 92 42.4
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 9.2e-13 79.0 74 41.9
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.2e-12 78.6 69 43.5
arahy.Tifrunner.gnm1.ann1.HID3FF Arachis hypogaea HOM05D006624 ORTHO05D008209 1.5e-10 71.6 110 34.5
Gohir.D07G137350 Gossypium hirsutum HOM05D006624 ORTHO05D008209 6.1e-09 66.2 87 48.3
Gohir.D08G202425 Gossypium hirsutum HOM05D006624 ORTHO05D008209 8.0e-09 65.9 87 48.3
Gohir.D07G075451 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.3e-08 64.3 87 47.1
Gohir.D11G288766 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.3e-08 64.3 87 47.1


User provided reference genes

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