Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 6.1e-188 660.6 320 100.0
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 1.3e-158 563.1 321 85.0
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 4.6e-151 538.1 321 81.0
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 2.3e-142 509.2 302 80.1
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 3.5e-127 458.8 311 69.5
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 2.5e-125 452.6 327 66.1
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 1.3e-124 450.3 314 67.2
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 9.9e-122 440.7 315 66.0
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 3.2e-120 435.6 306 66.7
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 3.5e-119 432.2 301 68.1
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 3.0e-118 429.1 296 67.6
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 3.9e-118 428.7 301 66.1
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 5.6e-117 424.9 305 65.9
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 7.4e-117 424.5 307 66.1
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 7.4e-117 424.5 304 65.5
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 9.6e-117 424.1 314 64.0
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 2.1e-116 422.9 307 63.8
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 2.8e-116 422.5 309 65.0
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 1.1e-115 420.6 301 65.4
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 2.4e-115 419.5 301 64.5
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 2.4e-115 419.5 301 64.5
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 5.3e-115 418.3 298 66.1
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 9.0e-115 417.5 296 65.9
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 9.0e-115 417.5 298 64.4
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 9.0e-115 417.5 296 65.5
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 5.8e-114 414.8 301 65.4
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 7.6e-114 414.5 297 65.3
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 9.9e-114 414.1 310 63.5
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 1.3e-113 413.7 290 67.9
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 1.7e-113 413.3 299 64.5
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 1.7e-113 413.3 294 64.6
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 2.2e-113 412.9 310 64.8
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 4.9e-113 411.8 298 65.1
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 1.1e-112 410.6 301 65.8
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 1.1e-112 410.6 298 65.4
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.9e-112 409.8 311 62.7
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 1.9e-112 409.8 301 65.1
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 3.2e-112 409.1 311 62.4
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 3.2e-112 409.1 294 65.3
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 5.5e-112 408.3 306 62.7
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 2.1e-111 406.4 295 63.1
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 2.7e-111 406.0 338 59.8
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 3.5e-111 405.6 294 63.3
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 7.9e-111 404.4 294 64.6
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 7.9e-111 404.4 301 63.5
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 7.9e-111 404.4 300 63.7
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 7.9e-111 404.4 301 62.5
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 1.3e-110 403.7 297 64.3
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 3.9e-110 402.1 301 62.8
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.9e-109 399.8 298 62.4
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 1.6e-108 396.7 297 63.3
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 1.6e-108 396.7 297 61.3
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 2.8e-108 396.0 312 60.3
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 2.8e-108 396.0 336 57.7
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 2.4e-107 392.9 320 58.8
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 2.4e-107 392.9 324 58.3
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 2.4e-107 392.9 294 63.6
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 2.4e-107 392.9 297 62.6
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 3.1e-107 392.5 322 58.4
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 9.0e-107 391.0 320 58.8
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 9.0e-107 391.0 294 62.9
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 1.5e-106 390.2 292 61.3
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 2.0e-106 389.8 294 63.3
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 4.5e-106 388.7 294 62.2
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 4.5e-106 388.7 294 62.2
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.0e-105 387.5 315 59.4
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.0e-105 387.5 288 63.2
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 1.0e-105 387.5 294 61.9
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 3.8e-105 385.6 294 60.9
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 3.2e-104 382.5 293 60.1
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 5.5e-104 381.7 290 61.4
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 5.5e-104 381.7 294 62.2
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 5.5e-104 381.7 294 61.9
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 1.6e-103 380.2 294 60.5
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 3.5e-103 379.0 295 61.0
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 4.6e-103 378.6 294 60.2
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 3.0e-102 375.9 288 61.8
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 5.1e-102 375.2 308 58.4
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 1.5e-101 373.6 295 61.4
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 1.5e-101 373.6 290 60.3
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 4.1e-99 365.5 294 59.2
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 4.1e-99 365.5 265 66.0
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 2.0e-98 363.2 295 59.3
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 7.6e-98 361.3 330 55.2
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 5.0e-97 358.6 285 61.4
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 5.0e-97 358.6 290 59.3
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 8.5e-97 357.8 299 57.5
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 2.5e-96 356.3 428 46.0
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 5.5e-96 355.1 320 54.7
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 1.2e-95 354.0 293 58.0
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 2.3e-94 349.7 292 56.8
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 6.3e-92 341.7 297 55.9
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 2.4e-91 339.7 296 56.1
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.9e-88 330.1 311 53.4
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 1.9e-88 330.1 443 42.2
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 4.4e-85 318.9 294 53.7
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 1.8e-83 313.5 297 51.5
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 3.8e-81 305.8 291 49.5
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.4e-75 287.3 302 47.0
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 2.0e-74 283.5 220 63.6
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 1.9e-72 276.9 306 43.8
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 1.1e-64 251.1 182 65.4
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 9.4e-64 248.1 301 41.5
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 9.5e-56 221.5 313 39.6
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 6.8e-54 215.3 150 66.7
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.0e-50 203.8 264 40.9
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 8.0e-39 165.2 113 66.4
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 2.4e-35 153.7 87 71.3
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 1.7e-33 147.5 139 51.8
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.9e-08 64.3 70 50.0


User provided reference genes

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