Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 0.0e+00 1114.0 552 100.0
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 8.5e-129 464.9 556 47.1
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 5.9e-114 415.6 529 43.9
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 8.0e-111 405.2 528 42.8
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 7.5e-109 398.7 556 41.0
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.0e-106 390.6 559 42.9
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 2.9e-105 386.7 558 41.2
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 5.7e-101 372.5 559 41.0
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 3.8e-97 359.8 512 41.2
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 5.2e-94 349.4 562 39.3
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 3.4e-93 346.7 566 37.1
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 4.4e-77 293.1 535 35.1
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 5.4e-75 286.2 586 34.1
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 5.4e-75 286.2 590 34.9
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 1.9e-67 261.2 580 32.6
Hma1.2p1_1796F.1_g302765 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.9e-52 210.7 393 36.6
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 2.1e-50 204.5 570 28.4
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 4.8e-47 193.4 567 28.2
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 7.6e-45 186.0 571 27.3
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 9.9e-45 185.7 556 29.9
Sed0017012 Sechium edule HOM05D007873 ORTHO05D008474 3.8e-44 183.7 457 33.3
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 4.9e-44 183.3 556 29.7
Gohir.A13G077400 Gossypium hirsutum HOM05D007873 ORTHO05D008474 6.7e-41 172.9 551 27.0
ClCG08G004160 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.8e-38 164.9 254 36.6
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 1.7e-36 158.3 567 25.4
MELO3C010591.2 Cucumis melo HOM05D007873 ORTHO05D008474 6.4e-36 156.4 254 34.6
Sed0004801 Sechium edule HOM05D007873 ORTHO05D008474 6.0e-34 149.8 368 31.0
Potri.006G027800 Populus trichocarpa HOM05D007873 ORTHO05D008474 1.6e-31 141.7 286 36.4
Potri.006G028000 Populus trichocarpa HOM05D007873 ORTHO05D008474 1.4e-30 138.7 264 38.6
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 3.4e-29 134.0 253 33.6
EL10Ac5g11134 Beta vulgaris HOM05D007873 ORTHO05D008474 7.1e-27 126.3 412 26.7
Gorai.007G058500 Gossypium raimondii HOM05D007873 ORTHO05D008474 1.2e-26 125.6 247 35.6
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 6.0e-26 123.2 235 34.9
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 1.8e-25 121.7 227 34.8
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 3.0e-25 120.9 237 32.1
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 3.0e-25 120.9 222 34.7
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 5.1e-25 120.2 242 31.8
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 3.3e-24 117.5 264 30.7
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 5.7e-24 116.7 260 30.4
Zm00001eb096930 Zea mays HOM05D007873 ORTHO05D008474 1.6e-23 115.2 567 23.8
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 3.7e-23 114.0 260 31.2
Sabra06G0020600 Salix brachista HOM05D007873 ORTHO05D008474 4.8e-23 113.6 198 38.4
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.8e-22 111.7 283 31.1
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 1.2e-21 109.0 280 31.8
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 2.6e-21 107.8 378 27.0
MELO3C019474.2 Cucumis melo HOM05D007873 ORTHO05D022399 4.5e-21 107.1 263 28.5
ClCG05G009670 Citrullus lanatus HOM05D007873 ORTHO05D022399 2.2e-20 104.8 265 27.9
CsaV3_3G019020 Cucumis sativus L. HOM05D007873 ORTHO05D022399 2.2e-20 104.8 266 28.9
CsaV3_3G019050 Cucumis sativus L. HOM05D007873 ORTHO05D022399 3.8e-20 104.0 267 27.0
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 1.4e-19 102.1 280 30.7
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.2e-18 99.0 261 31.8
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.6e-18 98.6 258 28.3
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 4.6e-18 97.1 225 32.9
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 1.9e-16 91.7 267 29.6
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 2.8e-15 87.8 212 32.1
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 3.7e-15 87.4 281 28.8
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 4.8e-15 87.0 218 29.8
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 6.3e-15 86.7 212 31.1
ClCG08G004150 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.1e-14 85.9 155 32.3
Hma1.2p1_0128F.1_g060000 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.4e-14 84.7 164 36.0
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 4.1e-14 84.0 213 31.5
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 3.4e-13 80.9 261 29.9
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 1.4e-11 75.5 218 29.8
Duzib147G0130 Durio zibethinus HOM05D007873 ORTHO05D008474 4.2e-11 73.9 122 32.0
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.1e-10 71.6 204 27.9
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 2.7e-10 71.2 201 29.4
AUR62032929 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.8e-09 68.6 136 34.6
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.9e-09 67.4 136 33.8
Sed0022005 Sechium edule HOM05D007873 ORTHO05D008474 8.8e-09 66.2 257 25.7
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 1.1e-08 65.9 237 28.7
Rhsim02G0080100 Rhododendron simsii HOM05D007873 ORTHO05D008474 2.0e-08 65.1 146 32.2
EL10Ac9g22999 Beta vulgaris HOM05D008909 ORTHO05D008474 3.3e-08 64.3 245 24.1
EL10Ac9g23005 Beta vulgaris HOM05D008909 ORTHO05D008474 4.4e-08 63.9 196 27.0
Duzib147G0086 Durio zibethinus HOM05D007873 ORTHO05D008474 3.7e-07 60.8 110 35.5
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 4.8e-07 60.5 190 25.8
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 6.3e-07 60.1 188 27.7
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 8.2e-07 59.7 188 26.6
AUR62040174 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.4e-06 58.9 239 23.4
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 4.1e-06 57.4 265 24.5
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 6.9e-06 56.6 208 25.5


User provided reference genes

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