Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020567 Sechium edule HOM05D001069 ORTHO05D007586 5.4e-63 244.2 127 100.0
Sed0025346 Sechium edule HOM05D001069 ORTHO05D007586 4.6e-54 214.5 127 85.8
MELO3C004390.2 Cucumis melo HOM05D001069 ORTHO05D007586 5.6e-52 207.6 127 83.5
ClCG02G016730 Citrullus lanatus HOM05D001069 ORTHO05D007586 7.3e-52 207.2 124 85.5
Rhsim07G0074100 Rhododendron simsii HOM05D001069 ORTHO05D007586 4.9e-48 194.5 127 77.2
CsaV3_2G004010 Cucumis sativus L. HOM05D001069 ORTHO05D007586 6.4e-48 194.1 127 78.7
Eucgr.H04324 Eucalyptus grandis HOM05D001069 ORTHO05D007586 6.4e-48 194.1 127 75.6
CSS0013670 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 1.4e-47 193.0 127 75.6
CSS0018717 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 1.4e-47 193.0 127 75.6
Prupe.6G344500 Prunus persica HOM05D001069 ORTHO05D007586 1.9e-47 192.6 127 77.2
CiPaw.08G122900 Carya illinoinensis HOM05D001069 ORTHO05D007586 2.4e-47 192.2 127 76.4
Thecc.05G281200 Theobroma cacao HOM05D001069 ORTHO05D007586 3.2e-47 191.8 128 77.3
PGR004G2600 Punica granatum HOM05D001069 ORTHO05D007586 7.1e-47 190.7 127 75.6
FAN05G3732 Fragaria x ananassa HOM05D001069 ORTHO05D007586 9.3e-47 190.3 127 76.4
arahy.Tifrunner.gnm1.ann1.SY74BB Arachis hypogaea HOM05D001069 ORTHO05D007586 1.2e-46 189.9 127 74.0
CiPaw.07G068400 Carya illinoinensis HOM05D001069 ORTHO05D007586 1.2e-46 189.9 127 74.8
Gohir.D13G107700 Gossypium hirsutum HOM05D001069 ORTHO05D007586 1.2e-46 189.9 128 78.1
Manes.09G151800 Manihot esculenta HOM05D001069 ORTHO05D007586 1.2e-46 189.9 127 74.8
Haze_04370 Corylus avellana HOM05D001069 ORTHO05D007586 1.6e-46 189.5 127 74.0
Duzib128G0644 Durio zibethinus HOM05D001069 ORTHO05D007586 1.6e-46 189.5 128 75.8
GSVIVG01036275001 Vitis vinifera HOM05D001069 ORTHO05D007586 1.6e-46 189.5 127 75.6
Actinidia32808 Actinidia chinensis HOM05D001069 ORTHO05D007586 2.7e-46 188.7 127 74.0
FAN09G0270 Fragaria x ananassa HOM05D001069 ORTHO05D007586 2.7e-46 188.7 127 75.6
FvH4_6g02700 Fragaria vesca HOM05D001069 ORTHO05D007586 3.5e-46 188.3 127 74.8
FAN14G5212 Fragaria x ananassa HOM05D001069 ORTHO05D007586 3.5e-46 188.3 127 74.8
Gohir.A13G104300 Gossypium hirsutum HOM05D001069 ORTHO05D007586 3.5e-46 188.3 128 77.3
FAN02G3324 Fragaria x ananassa HOM05D001069 ORTHO05D007586 6.0e-46 187.6 127 74.8
Manes.08G135700 Manihot esculenta HOM05D001069 ORTHO05D007586 6.0e-46 187.6 127 75.6
Nn1g02583 Nelumbo nucifera HOM05D001069 ORTHO05D007586 6.0e-46 187.6 127 72.4
COL.COLO4_15368 Corchorus olitorius HOM05D001069 ORTHO05D007586 7.8e-46 187.2 123 77.2
Gorai.013G120600 Gossypium raimondii HOM05D001069 ORTHO05D007586 7.8e-46 187.2 123 78.0
MD12G1242900 Malus domestica HOM05D001069 ORTHO05D007586 7.8e-46 187.2 127 74.8
RcHm_v2.0_Chr3g0450701 Rosa chinensis HOM05D001069 ORTHO05D007586 7.8e-46 187.2 127 74.0
Duzib177G1121 Durio zibethinus HOM05D001069 ORTHO05D007586 1.0e-45 186.8 128 75.8
Glyma.20G225500 Glycine max HOM05D001069 ORTHO05D007586 1.0e-45 186.8 127 74.0
MD04G1225700 Malus domestica HOM05D001069 ORTHO05D007586 1.0e-45 186.8 127 74.8
QL03p027238 Quercus lobata HOM05D001069 ORTHO05D007586 1.0e-45 186.8 126 74.6
arahy.Tifrunner.gnm1.ann1.AYUH3A Arachis hypogaea HOM05D001069 ORTHO05D007586 1.3e-45 186.4 127 73.2
CANSAT54G2612 Cannabis sativa HOM05D001069 ORTHO05D007586 1.3e-45 186.4 125 74.4
Cfa006409 Carpinus fangiana HOM05D001069 ORTHO05D001549 1.3e-45 186.4 124 74.2
FAN14G1639 Fragaria x ananassa HOM05D001069 ORTHO05D007586 1.3e-45 186.4 127 74.0
FAN14G4385 Fragaria x ananassa HOM05D001069 ORTHO05D007586 1.3e-45 186.4 127 74.0
Phvul.007G187900 Phaseolus vulgaris HOM05D001069 ORTHO05D007586 1.3e-45 186.4 127 74.0
Potri.013G042100 Populus trichocarpa HOM05D001069 ORTHO05D007586 1.3e-45 186.4 127 74.0
VMungo0720G0790 Vigna mungo HOM05D001069 ORTHO05D007586 1.3e-45 186.4 127 73.2
Dinv20292 Davidia involucrata HOM05D001069 ORTHO05D007586 1.7e-45 186.0 127 73.2
Lalb_Chr21g0311011 Lupinus albus HOM05D001069 ORTHO05D007586 1.7e-45 186.0 127 73.2
Potri.005G054500 Populus trichocarpa HOM05D001069 ORTHO05D007586 2.3e-45 185.7 127 74.0
TAR636G2667 Trochodendron aralioides HOM05D001069 ORTHO05D001549 3.0e-45 185.3 126 72.2
Glyma.10G162900 Glycine max HOM05D001069 ORTHO05D007586 3.9e-45 184.9 127 74.0
Nn3g19512 Nelumbo nucifera HOM05D001069 ORTHO05D007586 6.6e-45 184.1 127 72.4
Medtr1g080770 Medicago truncatula HOM05D001069 ORTHO05D007586 8.7e-45 183.7 127 72.4
THA.LOC104823751 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 8.7e-45 183.7 127 74.0
Atru.chr2.835 Acer truncatum HOM05D001069 ORTHO05D007586 1.1e-44 183.3 126 74.6
Psat6g145040 Pisum sativum HOM05D001069 ORTHO05D007586 1.1e-44 183.3 127 72.4
Cc02_g30720 Coffea canephora HOM05D001069 ORTHO05D007586 1.9e-44 182.6 129 74.4
Lalb_Chr06g0168091 Lupinus albus HOM05D001069 ORTHO05D007586 1.9e-44 182.6 127 71.7
Oeu002656.1 Olea europaea HOM05D001069 ORTHO05D007586 1.9e-44 182.6 129 72.1
THA.LOC104805822 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 1.9e-44 182.6 127 73.2
Nitab4.5_0001592g0010 Nicotiana tabacum HOM05D001069 ORTHO05D007586 2.5e-44 182.2 129 72.1
TPR.G12907 Trifolium pratense HOM05D001069 ORTHO05D007586 2.5e-44 182.2 127 71.7
Nitab4.5_0008996g0040 Nicotiana tabacum HOM05D001069 ORTHO05D007586 3.3e-44 181.8 129 72.1
Sabra05G0047400 Salix brachista HOM05D001069 ORTHO05D001549 3.3e-44 181.8 127 72.4
PSO210G4375 Papaver somniferum HOM05D001069 ORTHO05D007586 4.3e-44 181.4 126 70.6
Aqoxy2G00949 Aquilegia oxysepala HOM05D001069 ORTHO05D007586 7.3e-44 180.6 126 69.0
MSTRG.20449 Avicennia marina HOM05D001069 ORTHO05D007586 7.3e-44 180.6 129 72.9
Peaxi162Scf00282g00417 Petunia axillaris HOM05D001069 ORTHO05D007586 1.3e-43 179.9 129 70.5
PSO832G3124 Papaver somniferum HOM05D001069 ORTHO05D007586 1.6e-43 179.5 126 69.8
SGA_v2.0_scaffold5G02970 Striga asiatica HOM05D001069 ORTHO05D007586 1.6e-43 179.5 129 71.3
Lj5g0026442 Lotus japonicus HOM05D001069 ORTHO05D007586 3.6e-43 178.3 125 71.2
Os03g0628900 Oryza sativa ssp. japonica HOM05D001069 ORTHO05D007586 3.6e-43 178.3 127 70.1
Sc09g0003960 Simmondsia chinensis HOM05D001069 ORTHO05D007586 6.2e-43 177.6 127 72.4
DCAR_006651 Daucus carota HOM05D001069 ORTHO05D007586 8.1e-43 177.2 128 71.9
TWI12G0612 Tripterygium wilfordii HOM05D001069 ORTHO05D007586 8.1e-43 177.2 127 70.1
EL10Ac4g09163 Beta vulgaris HOM05D001069 ORTHO05D007586 1.1e-42 176.8 127 72.4
BcaB07g34137 Brassica carinata HOM05D001069 ORTHO05D007586 1.4e-42 176.4 130 70.8
CDE06G2591 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 1.4e-42 176.4 127 70.9
CAN.G134.94 Capsicum annuum HOM05D001069 ORTHO05D007586 2.4e-42 175.6 122 71.3
Migut.B01094 Erythranthe guttata HOM05D001069 ORTHO05D007586 2.4e-42 175.6 129 71.3
Aa31sc20G40 Aethionema arabicum HOM05D001069 ORTHO05D007586 4.0e-42 174.9 125 72.0
CARHR008700 Cardamine hirsuta HOM05D001069 ORTHO05D007586 4.0e-42 174.9 126 69.8
Ca_10042_v3 Cicer arietinum L. HOM05D001069 ORTHO05D007586 4.0e-42 174.9 124 71.0
ECA233G1896 Erigeron canadensis HOM05D000316 ORTHO05D000374 5.3e-42 174.5 126 69.0
A06p05680 Brassica napus HOM05D001069 ORTHO05D007586 6.9e-42 174.1 130 69.2
AUR62004967 Chenopodium quinoa HOM05D001069 ORTHO05D007586 6.9e-42 174.1 127 72.4
Ciclev10029576m.g Citrus clementina HOM05D001069 ORTHO05D007586 6.9e-42 174.1 126 69.8
C05p06850 Brassica napus HOM05D001069 ORTHO05D007586 9.0e-42 173.7 125 68.8
AUR62000994 Chenopodium quinoa HOM05D001069 ORTHO05D007586 9.0e-42 173.7 127 71.7
BcaC07g38446 Brassica carinata HOM05D001069 ORTHO05D007586 2.0e-41 172.6 131 67.9
BcaNung06267 Brassica carinata HOM05D001069 ORTHO05D007586 2.0e-41 172.6 131 67.2
C08p12160 Brassica napus HOM05D001069 ORTHO05D007586 2.0e-41 172.6 131 67.9
Hund22103 Selenicereus undatus HOM05D001069 ORTHO05D007586 2.6e-41 172.2 124 71.8
HanXRQChr16g0514711 Helianthus annuus HOM05D001069 ORTHO05D007586 3.4e-41 171.8 126 68.3
Thhalv10009095m.g Eutrema salsugineum HOM05D001069 ORTHO05D007586 4.5e-41 171.4 131 68.7
Sp1g07420 Schrenkiella parvula HOM05D001069 ORTHO05D007586 4.5e-41 171.4 131 68.7
A08p34980 Brassica napus HOM05D001069 ORTHO05D007586 7.6e-41 170.6 122 69.7
BraA08t35409Z Brassica rapa HOM05D001069 ORTHO05D007586 7.6e-41 170.6 122 69.7
Carub.0001s0812 Capsella rubella HOM05D001069 ORTHO05D007586 1.7e-40 169.5 119 73.1
AL1G19210 Arabidopsis lyrata HOM05D001069 ORTHO05D007586 2.2e-40 169.1 130 68.5
BolC5t29444H Brassica oleracea HOM05D001069 ORTHO05D007586 3.8e-40 168.3 119 69.7
BraA06t23778Z Brassica rapa HOM05D001069 ORTHO05D007586 8.4e-40 167.2 119 68.9
unitig_52.g17389 Utricularia gibba HOM05D001069 ORTHO05D007586 1.1e-39 166.8 122 69.7
AT1G08780 Arabidopsis thaliana HOM05D001069 ORTHO05D007586 1.9e-39 166.0 130 67.7
ATR0665G433 Amborella trichopoda HOM05D001069 ORTHO05D007586 2.4e-39 165.6 127 65.4
HPP92_026288 Vanilla planifolia HOM05D001069 ORTHO05D007586 3.2e-39 165.2 127 66.9
CDE07G0518 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 3.0e-37 158.7 127 66.1
MBI04_g44868_MAGBIO Magnolia biondii HOM05D001069 ORTHO05D007586 3.9e-37 158.3 127 65.4
BolC8t48854H Brassica oleracea HOM05D001069 ORTHO05D007586 8.7e-37 157.1 147 57.8
HanXRQChr17g0559331 Helianthus annuus HOM05D001069 ORTHO05D007586 8.7e-37 157.1 127 63.8
Zm00001eb051110 Zea mays HOM05D001069 ORTHO05D007586 1.1e-36 156.8 127 63.8
PGSC0003DMG401019457 Solanum tuberosum HOM05D001069 ORTHO05D007586 7.4e-36 154.1 129 63.6
Zm00001eb218870 Zea mays HOM05D001069 ORTHO05D007586 2.8e-35 152.1 127 62.2
Solyc01g097300.4 Solanum lycopersicum HOM05D001069 ORTHO05D007586 6.2e-35 151.0 129 62.8
Sopen01g040970 Solanum pennellii HOM05D001069 ORTHO05D007586 6.2e-35 151.0 129 62.8
Pp3c16_6640 Physcomitrium patens HOM05D001069 ORTHO05D007586 2.4e-34 149.1 127 61.4
arahy.Tifrunner.gnm1.ann1.VQ2WN5 Arachis hypogaea HOM05D001069 ORTHO05D007586 4.6e-30 134.8 101 68.3
CBR_g8595 Chara braunii HOM05D001069 ORTHO05D007586 4.6e-30 134.8 127 55.9
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 1.3e-29 133.3 150 51.3
AagrBONN_evm.TU.Sc2ySwM_369.398 Anthoceros agrestis HOM05D001069 ORTHO05D007586 1.8e-29 132.9 127 54.3
Mapoly0094s0008 Marchantia polymorpha HOM05D001069 ORTHO05D007586 3.3e-28 128.6 127 52.8
vmacro13808 Vaccinium macrocarpon HOM05D001069 ORTHO05D007586 7.4e-28 127.5 87 74.7
Sabra13G0038700 Salix brachista HOM05D001069 ORTHO05D007586 1.1e-26 123.6 88 73.9
Lsat_1_v5_gn_5_68360 Lactuca sativa HOM05D001069 ORTHO05D007586 9.0e-26 120.6 87 72.4
SMO356G0364 Selaginella moellendorffii HOM05D001069 ORTHO05D007586 4.5e-25 118.2 133 49.6
SHI18420 Sapria himalayana HOM05D001069 ORTHO05D007586 7.1e-23 110.9 87 64.4
MCO16G237 Micromonas commoda HOM05D001069 ORTHO05D007586 5.3e-18 94.7 120 41.7
Cre16.g671750 Chlamydomonas reinhardtii HOM05D001069 ORTHO05D007586 3.6e-14 82.0 121 40.5
arahy.Tifrunner.gnm1.ann1.X5I3PL Arachis hypogaea HOM05D001069 ORTHO05D007586 2.5e-12 75.9 46 80.4
PRCOL_00003582 Prasinoderma coloniale HOM05D001069 ORTHO05D007586 2.5e-12 75.9 121 39.7
TAR365G0807 Trochodendron aralioides HOM05D001069 ORTHO05D007586 3.3e-12 75.5 61 62.3
arahy.Tifrunner.gnm1.ann1.JAH3YR Arachis hypogaea HOM05D001069 ORTHO05D007586 5.9e-09 64.7 40 70.0
Sabra13G0038600 Salix brachista HOM05D000002 ORTHO05D000001 1.3e-08 63.5 40 72.5
SHI18422 Sapria himalayana HOM05D001069 ORTHO05D007586 5.0e-08 61.6 41 73.2
TAR633G2811 Trochodendron aralioides HOM05D001069 ORTHO05D007586 1.6e-06 56.6 32 75.0
arahy.Tifrunner.gnm1.ann1.VDJK8S Arachis hypogaea HOM05D001069 ORTHO05D007586 2.1e-06 56.2 50 58.0


User provided reference genes

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