Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020512 Sechium edule HOM05D007609 ORTHO05D009539 7.3e-39 163.3 76 100.0
Sed0019634 Sechium edule HOM05D007609 ORTHO05D009539 1.2e-17 92.8 84 59.5
CsaV3_1G030560 Cucumis sativus L. HOM05D007609 ORTHO05D009539 4.3e-15 84.3 82 50.0
Lsat_1_v5_gn_4_103641 Lactuca sativa HOM05D007609 ORTHO05D009539 7.1e-10 67.0 66 50.0
Peaxi162Scf00015g00416 Petunia axillaris HOM05D007609 ORTHO05D009539 2.1e-09 65.5 74 41.9
Glyma.07G087100 Glycine max HOM05D007609 ORTHO05D009539 3.5e-09 64.7 38 65.8
CiPaw.01G239000 Carya illinoinensis HOM05D007609 ORTHO05D009539 4.6e-09 64.3 82 39.0
Potri.006G159300 Populus trichocarpa HOM05D007609 ORTHO05D009539 7.8e-09 63.5 80 43.8
Phvul.004G162600 Phaseolus vulgaris HOM05D007609 ORTHO05D009539 1.3e-08 62.8 72 44.4
Ca_25525_v3 Cicer arietinum L. HOM05D007609 ORTHO05D009539 2.3e-08 62.0 42 59.5
Lalb_Chr05g0222821 Lupinus albus HOM05D007609 ORTHO05D009539 2.3e-08 62.0 31 67.7
QL05p023464 Quercus lobata HOM05D007609 ORTHO05D009539 2.3e-08 62.0 38 60.5
TPR.G35275 Trifolium pratense HOM05D007609 ORTHO05D009539 2.3e-08 62.0 39 66.7
Potri.018G078900 Populus trichocarpa HOM05D007609 ORTHO05D009539 3.0e-08 61.6 43 62.8
QL10p054851 Quercus lobata HOM05D007609 ORTHO05D009539 3.0e-08 61.6 38 57.9
Ciclev10010038m.g Citrus clementina HOM05D007609 ORTHO05D009539 5.1e-08 60.8 87 37.9
Thecc.09G111700 Theobroma cacao HOM05D007609 ORTHO05D009539 5.1e-08 60.8 45 62.2
Eucgr.C03849 Eucalyptus grandis HOM05D007609 ORTHO05D009539 6.6e-08 60.5 42 61.9
Solyc06g066700.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 6.6e-08 60.5 81 38.3
CSS0012617 Camellia sinensis var. sinensis HOM05D007609 ORTHO05D009539 8.7e-08 60.1 60 46.7
Glyma.09G189800 Glycine max HOM05D007609 ORTHO05D009539 8.7e-08 60.1 39 61.5
Aqoxy7G01699 Aquilegia oxysepala HOM05D007609 ORTHO05D009539 1.1e-07 59.7 30 73.3
Gohir.A07G006801 Gossypium hirsutum HOM05D007609 ORTHO05D009539 1.1e-07 59.7 44 59.1
Sopen06g024990 Solanum pennellii HOM05D007609 ORTHO05D009539 1.1e-07 59.7 81 35.8
VMungo0464G1934 Vigna mungo HOM05D007609 ORTHO05D009539 1.1e-07 59.7 37 64.9
PGSC0003DMG400016536 Solanum tuberosum HOM05D007609 ORTHO05D009539 1.5e-07 59.3 71 38.0
DCAR_023052 Daucus carota HOM05D007609 ORTHO05D009539 2.5e-07 58.5 32 65.6
Gohir.A08G241000 Gossypium hirsutum HOM05D007609 ORTHO05D009539 2.5e-07 58.5 84 40.5
Gohir.D08G261700 Gossypium hirsutum HOM05D007609 ORTHO05D009539 2.5e-07 58.5 84 40.5
Gorai.004G279800 Gossypium raimondii HOM05D007609 ORTHO05D009539 2.5e-07 58.5 84 40.5
HanXRQChr10g0317871 Helianthus annuus HOM05D007609 ORTHO05D009539 2.5e-07 58.5 48 56.2
Hma1.2p1_0018F.1_g013450 Hydrangea macrophylla HOM05D007609 ORTHO05D009539 2.5e-07 58.5 61 49.2
Sabra18G0066900 Salix brachista HOM05D007609 ORTHO05D009539 2.5e-07 58.5 33 72.7
Sc18g0001160 Simmondsia chinensis HOM05D007609 ORTHO05D009539 2.5e-07 58.5 33 66.7
Gohir.D07G005100 Gossypium hirsutum HOM05D007609 ORTHO05D009539 3.3e-07 58.2 32 75.0
Gorai.001G004700 Gossypium raimondii HOM05D007609 ORTHO05D009539 3.3e-07 58.2 32 75.0
Nitab4.5_0005851g0050 Nicotiana tabacum HOM05D007609 ORTHO05D009539 3.3e-07 58.2 44 59.1
TAR626G0143 Trochodendron aralioides HOM05D007609 ORTHO05D025968 5.6e-07 57.4 34 61.8
COL.COLO4_34908 Corchorus olitorius HOM05D007609 ORTHO05D009539 7.3e-07 57.0 28 75.0
Dinv38045 Davidia involucrata HOM05D007609 ORTHO05D009539 7.3e-07 57.0 55 50.9
Lsat_1_v5_gn_5_101501 Lactuca sativa HOM05D007609 ORTHO05D009539 7.3e-07 57.0 32 68.8
Cpa.g.sc451.1 Carica papaya HOM05D007609 ORTHO05D009539 9.6e-07 56.6 43 55.8
CiPaw.04G164800 Carya illinoinensis HOM05D008067 ORTHO05D010226 9.6e-07 56.6 48 52.1
Eucgr.C01049 Eucalyptus grandis HOM05D007609 ORTHO05D009539 9.6e-07 56.6 42 61.9
Medtr8g083460 Medicago truncatula HOM05D007609 ORTHO05D009539 9.6e-07 56.6 38 57.9
Peaxi162Scf00207g00095 Petunia axillaris HOM05D007609 ORTHO05D009539 9.6e-07 56.6 80 38.8
AUR62011005 Chenopodium quinoa HOM05D007609 ORTHO05D009539 1.2e-06 56.2 32 62.5
AUR62021516 Chenopodium quinoa HOM05D007609 ORTHO05D009539 1.2e-06 56.2 32 62.5
PGSC0003DMG400005605 Solanum tuberosum HOM05D007609 ORTHO05D009539 1.2e-06 56.2 73 41.1
AUR62016446 Chenopodium quinoa HOM05D007609 ORTHO05D009539 1.6e-06 55.8 57 49.1
Lalb_Chr22g0352851 Lupinus albus HOM05D007609 ORTHO05D009539 1.6e-06 55.8 78 35.9
Manes.03G019500 Manihot esculenta HOM05D007609 ORTHO05D009539 1.6e-06 55.8 43 48.8
Manes.16G116800 Manihot esculenta HOM05D007609 ORTHO05D009539 1.6e-06 55.8 41 58.5
Medtr6g086445 Medicago truncatula HOM05D007609 ORTHO05D009539 1.6e-06 55.8 33 69.7
Lj2g0010717 Lotus japonicus HOM05D007609 ORTHO05D009539 2.1e-06 55.5 39 56.4
Nitab4.5_0000351g0200 Nicotiana tabacum HOM05D007609 ORTHO05D009539 2.1e-06 55.5 80 40.0
Gohir.A06G061700 Gossypium hirsutum HOM05D007609 ORTHO05D009539 2.8e-06 55.1 79 38.0
Gorai.010G069800 Gossypium raimondii HOM05D007609 ORTHO05D009539 2.8e-06 55.1 36 61.1
Ah.14g081870 Amaranthus hybridus HOM05D007609 ORTHO05D009539 3.6e-06 54.7 30 66.7
Prupe.7G229700 Prunus persica HOM05D007609 ORTHO05D009539 3.6e-06 54.7 29 72.4
Solyc03g120155.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 3.6e-06 54.7 35 60.0
unitig_899.g14776 Utricularia gibba HOM05D007609 ORTHO05D009539 3.6e-06 54.7 51 49.0
BcaB04g17155 Brassica carinata HOM05D010933 ORTHO05D013136 4.7e-06 54.3 80 31.2
Gohir.D06G060000 Gossypium hirsutum HOM05D007609 ORTHO05D009539 4.7e-06 54.3 79 38.0
Nitab4.5_0003351g0110 Nicotiana tabacum HOM05D007609 ORTHO05D009539 4.7e-06 54.3 84 40.5
ECA232G3029 Erigeron canadensis HOM05D007609 ORTHO05D009539 6.2e-06 53.9 85 38.8
Eucgr.F03018 Eucalyptus grandis HOM05D007609 ORTHO05D009539 6.2e-06 53.9 40 65.0
DCAR_028717 Daucus carota HOM05D007609 ORTHO05D009539 8.1e-06 53.5 25 76.0
Lj4g0003308 Lotus japonicus HOM05D007609 ORTHO05D009539 8.1e-06 53.5 53 45.3
Sopen03g039030 Solanum pennellii HOM05D007609 ORTHO05D009539 8.1e-06 53.5 33 60.6


User provided reference genes

Program Settings