Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020460 Sechium edule HOM05D007545 ORTHO05D009579 1.8e-118 430.6 225 100.0
Sed0004069 Sechium edule HOM05D007545 ORTHO05D009579 2.3e-113 413.7 244 91.4
MELO3C032020.2 Cucumis melo HOM05D007545 ORTHO05D009579 7.3e-83 312.4 245 67.3
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 8.4e-55 219.2 226 54.0
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 1.4e-54 218.4 233 50.6
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 1.6e-53 214.9 240 51.7
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 9.6e-51 205.7 213 51.6
Cfa007791 Carpinus fangiana HOM05D007545 ORTHO05D009579 1.8e-49 201.4 226 51.8
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 2.4e-49 201.1 228 48.7
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 3.1e-49 200.7 211 51.2
Haze_14281 Corylus avellana HOM05D007545 ORTHO05D009579 3.1e-49 200.7 199 55.3
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 5.8e-48 196.4 214 50.5
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 8.4e-47 192.6 241 47.3
CiPaw.03G073600 Carya illinoinensis HOM05D007545 ORTHO05D009579 5.4e-46 189.9 225 47.6
CsaV3_3G017850 Cucumis sativus L. HOM05D007545 ORTHO05D009579 6.0e-45 186.4 147 68.0
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 3.9e-44 183.7 228 43.4
MD17G1268500 Malus domestica HOM05D007545 ORTHO05D009579 6.6e-44 183.0 211 49.8
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 8.7e-44 182.6 229 43.7
Cpa.g.sc340.2 Carica papaya HOM05D007545 ORTHO05D009579 6.2e-42 176.4 235 42.6
THA.LOC104805633 Tarenaya hassleriana HOM05D007545 ORTHO05D009579 6.2e-42 176.4 242 43.8
ClCG05G010640 Citrullus lanatus HOM05D007545 ORTHO05D009579 8.1e-42 176.0 140 65.0
Nitab4.5_0001650g0170 Nicotiana tabacum HOM05D007545 ORTHO05D009579 4.0e-41 173.7 222 45.5
Manes.01G119900 Manihot esculenta HOM05D007545 ORTHO05D009579 5.3e-41 173.3 233 45.5
Migut.K00924 Erythranthe guttata HOM05D007545 ORTHO05D009579 1.2e-40 172.2 218 46.3
Hund13089 Selenicereus undatus HOM05D007545 ORTHO05D009579 2.6e-40 171.0 225 43.1
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 4.5e-40 170.2 255 43.9
Sc14g0006910 Simmondsia chinensis HOM05D007545 ORTHO05D009579 5.8e-40 169.9 213 42.3
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 7.6e-40 169.5 236 41.5
Potri.017G131400 Populus trichocarpa HOM05D007545 ORTHO05D009579 9.9e-40 169.1 251 43.4
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 1.3e-39 168.7 215 46.0
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 1.3e-39 168.7 209 44.5
AT1G09680 Arabidopsis thaliana HOM05D007545 ORTHO05D009579 1.7e-39 168.3 245 40.8
QL08p020033 Quercus lobata HOM05D007545 ORTHO05D009579 3.8e-39 167.2 241 43.6
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 1.4e-38 165.2 246 43.9
Rhsim10G0178600 Rhododendron simsii HOM05D007545 ORTHO05D009579 3.2e-38 164.1 213 43.2
Aa31LG1G5330 Aethionema arabicum HOM05D007545 ORTHO05D009579 4.2e-38 163.7 251 40.2
C05p07760 Brassica napus HOM05D007545 ORTHO05D009579 5.4e-38 163.3 240 42.5
BolC5t29527H Brassica oleracea HOM05D007545 ORTHO05D009579 5.4e-38 163.3 240 42.5
Phvul.008G237700 Phaseolus vulgaris HOM05D007545 ORTHO05D009579 5.4e-38 163.3 220 42.3
BraA06t23847Z Brassica rapa HOM05D007545 ORTHO05D009579 7.1e-38 162.9 241 44.0
Sp1g08270 Schrenkiella parvula HOM05D001024 ORTHO05D009579 7.1e-38 162.9 256 38.7
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 9.3e-38 162.5 238 40.3
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 9.3e-38 162.5 222 41.0
Ciclev10011347m.g Citrus clementina HOM05D007545 ORTHO05D009579 1.2e-37 162.2 227 42.7
CARHR009650 Cardamine hirsuta HOM05D007545 ORTHO05D009579 1.6e-37 161.8 236 40.3
Lsat_1_v5_gn_2_68461 Lactuca sativa HOM05D007545 ORTHO05D009579 1.6e-37 161.8 221 43.4
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 1.6e-37 161.8 215 46.0
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 1.6e-37 161.8 225 41.8
AL1G20230 Arabidopsis lyrata HOM05D007545 ORTHO05D009579 2.1e-37 161.4 236 40.3
Carub.0001s0902 Capsella rubella HOM05D007545 ORTHO05D009579 2.7e-37 161.0 237 40.5
A06p06360 Brassica napus HOM05D007545 ORTHO05D009579 4.6e-37 160.2 241 43.2
GSVIVG01030674001 Vitis vinifera HOM05D007545 ORTHO05D009579 4.6e-37 160.2 219 43.8
VMungo0647G0528 Vigna mungo HOM05D007545 ORTHO05D009579 1.0e-36 159.1 219 42.0
Glyma.02G243500 Glycine max HOM05D007545 ORTHO05D009579 2.3e-36 157.9 223 41.7
FAN26G0753 Fragaria x ananassa HOM05D007545 ORTHO05D009579 3.9e-36 157.1 214 44.9
CANSAT64G1149 Cannabis sativa HOM05D007545 ORTHO05D009579 6.7e-36 156.4 182 50.0
Eucgr.F02875 Eucalyptus grandis HOM05D007545 ORTHO05D009579 1.5e-35 155.2 215 40.0
Nitab4.5_0001088g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 8.1e-34 149.4 217 42.9
FAN19G0914 Fragaria x ananassa HOM05D007545 ORTHO05D009579 1.4e-33 148.7 217 42.4
HanXRQChr14g0457331 Helianthus annuus HOM05D007545 ORTHO05D009579 1.8e-33 148.3 217 41.0
Hma1.2p1_0158F.1_g070060 Hydrangea macrophylla HOM05D007545 ORTHO05D009579 6.9e-33 146.4 210 41.0
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 1.5e-32 145.2 215 40.0
ECA238G0700 Erigeron canadensis HOM05D007545 ORTHO05D009579 2.0e-32 144.8 230 38.7
Aqoxy3G04069 Aquilegia oxysepala HOM05D007545 ORTHO05D009579 4.5e-32 143.7 212 41.0
PGR004G2599 Punica granatum HOM05D007545 ORTHO05D009579 1.3e-31 142.1 258 38.4
Atru.chr1.1983 Acer truncatum HOM05D007545 ORTHO05D009579 3.5e-29 134.0 243 35.4
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 2.5e-27 127.9 140 47.1
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 1.6e-26 125.2 151 45.7
Gohir.A08G039000 Gossypium hirsutum HOM05D007545 ORTHO05D009579 7.6e-24 116.3 159 44.0
QL05p016537 Quercus lobata HOM05D007545 ORTHO05D009579 9.3e-22 109.4 164 40.2
Gorai.007G220500 Gossypium raimondii HOM05D007545 ORTHO05D009579 1.2e-21 109.0 130 45.4
Psat2g047200 Pisum sativum HOM05D007545 ORTHO05D009579 2.1e-21 108.2 144 38.9
Nn3g18372 Nelumbo nucifera HOM05D007545 ORTHO05D009579 4.6e-21 107.1 127 44.1
Peaxi162Scf00562g00002 Petunia axillaris HOM05D007545 ORTHO05D009579 2.2e-18 98.2 144 38.9
Zm00001eb080530 Zea mays HOM05D007545 ORTHO05D009579 2.8e-18 97.8 219 31.1
CAN.G222.58 Capsicum annuum HOM05D007545 ORTHO05D009579 6.3e-18 96.7 142 38.7
Nitab4.5_0010123g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.8e-17 95.1 133 39.1
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 5.3e-17 93.6 133 38.3
PGSC0003DMG400013237 Solanum tuberosum HOM05D007545 ORTHO05D009579 9.0e-17 92.8 133 39.8
Solyc11g011410.3 Solanum lycopersicum HOM05D007545 ORTHO05D009579 1.2e-16 92.4 133 39.1
Lj4C259T9 Lonicera japonica HOM05D007545 ORTHO05D009579 1.5e-16 92.0 131 38.2
Sopen11g006210 Solanum pennellii HOM05D007545 ORTHO05D009579 1.0e-15 89.4 133 38.3
Sabra17G0109500 Salix brachista HOM05D007545 ORTHO05D009579 2.2e-15 88.2 140 36.4
FvH4_1g30171 Fragaria vesca HOM05D007545 ORTHO05D009579 2.5e-14 84.7 121 44.6
Nitab4.5_0001650g0140 Nicotiana tabacum HOM05D007545 ORTHO05D009579 3.2e-14 84.3 141 36.2
Ca_05835_v3 Cicer arietinum L. HOM05D007545 ORTHO05D009579 3.6e-13 80.9 119 36.1
ATR0753G016 Amborella trichopoda HOM05D007545 ORTHO05D009579 1.9e-11 75.1 129 32.6
COL.COLO4_13423 Corchorus olitorius HOM05D007545 ORTHO05D009579 1.3e-10 72.4 87 42.5
SEGI_34198 Sequoiadendron giganteum HOM05D007545 ORTHO05D009579 1.7e-10 72.0 184 27.7
Dinv28181 Davidia involucrata HOM05D007545 ORTHO05D009579 7.7e-08 63.2 48 56.2
HPP92_026949 Vanilla planifolia HOM05D007545 ORTHO05D009579 3.8e-07 60.8 88 35.2
GSVIVG01038280001 Vitis vinifera HOM05D003210 ORTHO05D000001 5.0e-07 60.5 176 29.0
Lj3C22T6 Lonicera japonica HOM05D003210 ORTHO05D000001 1.1e-06 59.3 176 27.3
Nitab4.5_0005124g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 1.1e-06 59.3 48 50.0
Gohir.A12G085200 Gossypium hirsutum HOM05D003210 ORTHO05D000001 2.5e-06 58.2 178 29.8
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 7.2e-06 56.6 240 25.0
CDE07G1026 Ceratophyllum demersum HOM05D007545 ORTHO05D009579 7.2e-06 56.6 111 32.4
Gorai.008G093300 Gossypium raimondii HOM05D003210 ORTHO05D000001 7.2e-06 56.6 174 29.9
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 9.4e-06 56.2 168 29.2


User provided reference genes

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