Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 8.5e-166 587.0 318 100.0
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 3.3e-149 531.9 321 90.0
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 3.6e-140 501.9 305 87.2
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 8.1e-116 421.0 316 74.1
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 6.6e-102 374.8 303 66.7
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 2.1e-100 369.8 303 65.3
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.8e-99 366.7 303 64.7
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.8e-99 366.7 303 65.0
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 2.4e-99 366.3 298 66.8
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 3.1e-99 365.9 296 67.2
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 5.3e-99 365.2 307 63.8
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 4.5e-98 362.1 304 64.5
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 1.7e-97 360.1 301 64.1
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 6.4e-97 358.2 298 64.8
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 8.4e-97 357.8 300 64.7
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 8.4e-97 357.8 304 64.5
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 4.2e-96 355.5 304 62.8
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 7.1e-96 354.8 306 64.7
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 9.3e-96 354.4 294 65.3
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 2.1e-95 353.2 299 65.6
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 2.7e-95 352.8 299 65.2
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 6.0e-95 351.7 299 64.9
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 1.9e-93 346.7 303 63.0
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 2.5e-93 346.3 308 62.3
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 9.6e-93 344.4 298 62.8
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 2.1e-92 343.2 297 60.6
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 4.9e-89 332.0 296 61.5
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 8.4e-89 331.3 294 61.2
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 1.2e-87 327.4 282 64.5
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 2.1e-87 326.6 286 61.2
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 3.5e-87 325.9 296 60.5
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 1.0e-86 324.3 286 60.8
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 1.8e-86 323.6 295 59.7
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 2.3e-86 323.2 303 60.1
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.1e-83 314.3 274 63.1
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 1.8e-83 313.5 317 57.4
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 3.1e-83 312.8 290 60.3
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 5.3e-83 312.0 305 58.0
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 1.5e-82 310.5 305 58.0
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 4.5e-82 308.9 304 56.9
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 7.6e-82 308.1 290 58.3
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 1.1e-80 304.3 301 58.1
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 1.6e-79 300.4 301 56.8
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 2.7e-79 299.7 302 55.6
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 4.6e-79 298.9 294 55.1
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 1.9e-77 293.5 272 60.7
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 5.7e-77 292.0 214 70.6
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 1.4e-75 287.3 298 57.0
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 1.4e-72 277.3 296 55.4
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 1.7e-68 263.8 308 51.0
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 8.2e-68 261.5 295 53.6
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 6.7e-62 241.9 245 58.0
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 2.8e-60 236.5 294 49.0
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 1.2e-58 231.1 239 55.2
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 9.4e-56 221.5 215 60.9
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 1.5e-53 214.2 183 61.7
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 1.2e-50 204.5 215 55.3
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 8.0e-31 138.7 303 35.3
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 8.9e-22 108.6 267 33.0
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 1.1e-16 91.7 67 62.7
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 4.3e-16 89.7 297 28.3
CsaV3_6G001940 Cucumis sativus L. HOM05D000215 ORTHO05D008904 2.4e-11 73.9 265 26.4
MELO3C008310.2 Cucumis melo HOM05D000215 ORTHO05D008904 5.4e-11 72.8 265 26.0
ClCG11G006020 Citrullus lanatus HOM05D000215 ORTHO05D008904 9.2e-11 72.0 265 26.0
Duzib235G1018 Durio zibethinus HOM05D000215 ORTHO05D007108 2.1e-10 70.9 201 28.9
Duzib192G0603 Durio zibethinus HOM05D000215 ORTHO05D007108 1.0e-09 68.6 265 26.4
Sp7g19440 Schrenkiella parvula HOM05D000215 ORTHO05D007108 2.3e-09 67.4 245 28.2
Lalb_Chr20g0122541 Lupinus albus HOM05D000215 ORTHO05D007108 3.0e-09 67.0 290 26.6
Actinidia05554 Actinidia chinensis HOM05D000215 ORTHO05D007108 6.6e-09 65.9 256 28.1
AL7G32750 Arabidopsis lyrata HOM05D000215 ORTHO05D007108 6.6e-09 65.9 279 25.1
Gohir.A06G208700 Gossypium hirsutum HOM05D000215 ORTHO05D007108 8.6e-09 65.5 201 28.4
Gohir.D06G212400 Gossypium hirsutum HOM05D000215 ORTHO05D007108 8.6e-09 65.5 201 28.4
Gohir.A10G018000 Gossypium hirsutum HOM05D000215 ORTHO05D007108 1.1e-08 65.1 217 29.5
Gorai.011G020300 Gossypium raimondii HOM05D000215 ORTHO05D007108 1.1e-08 65.1 217 29.5
Lsat_1_v5_gn_2_123761 Lactuca sativa HOM05D000215 ORTHO05D008904 1.1e-08 65.1 278 26.6
THA.LOC104806263 Tarenaya hassleriana HOM05D000215 ORTHO05D007108 1.1e-08 65.1 267 27.0
Thecc.06G205300 Theobroma cacao HOM05D000215 ORTHO05D007108 1.5e-08 64.7 210 27.1
Gohir.D10G018300 Gossypium hirsutum HOM05D000215 ORTHO05D007108 1.9e-08 64.3 217 29.5
Lj1g0010870 Lotus japonicus HOM05D000215 ORTHO05D002282 1.9e-08 64.3 292 25.0
MBI02_g37288_MAGBIO Magnolia biondii HOM05D000215 ORTHO05D007108 1.9e-08 64.3 218 28.0
COL.COLO4_31663 Corchorus olitorius HOM05D000215 ORTHO05D007108 3.3e-08 63.5 212 27.8
SHI02135 Sapria himalayana HOM05D000215 ORTHO05D007108 4.3e-08 63.2 202 28.7
Sc16g0010070 Simmondsia chinensis HOM05D000215 ORTHO05D002282 4.3e-08 63.2 277 24.5
PSO210G4266 Papaver somniferum HOM05D000215 ORTHO05D007108 5.6e-08 62.8 241 28.2
C01p15280 Brassica napus HOM05D000215 ORTHO05D007108 7.3e-08 62.4 305 24.9
BolC1t01481H Brassica oleracea HOM05D000215 ORTHO05D007108 7.3e-08 62.4 305 24.9
Aa31LG1G16780 Aethionema arabicum HOM05D002131 ORTHO05D002141 9.5e-08 62.0 231 29.0
Duzib160G0747 Durio zibethinus HOM05D000215 ORTHO05D007108 9.5e-08 62.0 201 28.4
TWI38G1621 Tripterygium wilfordii HOM05D000215 ORTHO05D007108 9.5e-08 62.0 212 27.8
AT4G21350 Arabidopsis thaliana HOM05D000215 ORTHO05D007108 1.2e-07 61.6 219 27.9
GSVIVG01006112001 Vitis vinifera HOM05D000215 ORTHO05D007108 1.2e-07 61.6 261 25.3
CARHR227940 Cardamine hirsuta HOM05D000215 ORTHO05D007108 1.6e-07 61.2 212 27.4
QL05p077977 Quercus lobata HOM05D000215 ORTHO05D007108 1.6e-07 61.2 201 26.4
Rhsim12G0121400 Rhododendron simsii HOM05D000215 ORTHO05D003454 2.1e-07 60.8 267 24.7
TWI63G1343 Tripterygium wilfordii HOM05D000215 ORTHO05D007108 2.1e-07 60.8 277 26.7
BraA01t01212Z Brassica rapa HOM05D000215 ORTHO05D007108 2.8e-07 60.5 222 27.0
Thhalv10025498m.g Eutrema salsugineum HOM05D000215 ORTHO05D007108 2.8e-07 60.5 306 25.5
AUR62012277 Chenopodium quinoa HOM05D000215 ORTHO05D008904 4.7e-07 59.7 269 24.2
PSO832G3300 Papaver somniferum HOM05D000215 ORTHO05D007108 6.2e-07 59.3 241 28.2
CiPaw.10G113900 Carya illinoinensis HOM05D000215 ORTHO05D007108 8.1e-07 58.9 201 28.4
Atru.chr10.2096 Acer truncatum HOM05D000215 ORTHO05D007108 1.4e-06 58.2 214 28.5
A01p12690 Brassica napus HOM05D000215 ORTHO05D007108 1.4e-06 58.2 236 27.1
Haze_06635 Corylus avellana HOM05D000215 ORTHO05D007108 1.4e-06 58.2 204 27.0
Manes.17G031300 Manihot esculenta HOM05D000215 ORTHO05D007108 1.4e-06 58.2 217 28.6
Pp3c3_32490 Physcomitrium patens HOM05D000271 ORTHO05D004758 1.4e-06 58.2 302 27.8
Ah.09g236910 Amaranthus hybridus HOM05D000215 ORTHO05D007108 1.8e-06 57.8 215 27.4
ATR0804G090 Amborella trichopoda HOM05D000215 ORTHO05D007108 1.8e-06 57.8 239 30.5
Glyma.15G064800 Glycine max HOM05D000215 ORTHO05D007108 1.8e-06 57.8 232 27.6
BcaC09g51233 Brassica carinata HOM05D000215 ORTHO05D007108 2.3e-06 57.4 229 27.1
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 2.3e-06 57.4 193 27.5
Haze_06646 Corylus avellana HOM05D000215 ORTHO05D007108 2.3e-06 57.4 204 27.0
Manes.16G015200 Manihot esculenta HOM05D000215 ORTHO05D007108 2.3e-06 57.4 243 26.7
SalBow3G0986 Salvia bowleyana HOM05D000215 ORTHO05D002282 2.3e-06 57.4 281 23.1
Glyma.02G264200 Glycine max HOM05D000215 ORTHO05D008904 3.1e-06 57.0 263 24.0
Pp3c26_8290 Physcomitrium patens HOM05D006338 ORTHO05D007946 3.1e-06 57.0 294 24.8
PGR004G2784 Punica granatum HOM05D000215 ORTHO05D007108 3.1e-06 57.0 217 27.2
Lsat_1_v5_gn_5_168041 Lactuca sativa HOM05D000215 ORTHO05D001676 4.0e-06 56.6 242 26.4
Nn1g06886 Nelumbo nucifera HOM05D000215 ORTHO05D007108 4.0e-06 56.6 200 28.5
TAR627G1172 Trochodendron aralioides HOM05D000215 ORTHO05D007108 4.0e-06 56.6 223 26.5
Prupe.4G031100 Prunus persica HOM05D000215 ORTHO05D007108 5.2e-06 56.2 204 27.0
THA.LOC104812597 Tarenaya hassleriana HOM05D000215 ORTHO05D007108 5.2e-06 56.2 211 27.5
Dinv17864 Davidia involucrata HOM05D000215 ORTHO05D007108 8.9e-06 55.5 201 26.9


User provided reference genes

Program Settings