Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 4.2e-110 401.4 201 100.0
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 9.4e-86 320.5 201 79.1
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 2.0e-80 302.8 202 76.2
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 2.2e-79 299.3 202 75.7
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.8e-57 226.5 169 68.0
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.4e-57 226.1 196 63.3
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 4.1e-57 225.3 193 63.2
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 4.1e-57 225.3 196 62.8
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 4.1e-57 225.3 175 68.6
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 5.4e-57 224.9 174 67.8
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 2.0e-56 223.0 168 67.9
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.7e-56 222.6 196 62.8
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 5.0e-55 218.4 174 69.0
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 5.0e-55 218.4 167 68.9
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 6.6e-55 218.0 167 71.3
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 6.6e-55 218.0 145 76.6
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.1e-54 217.2 144 77.1
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.5e-54 216.9 141 78.0
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 4.3e-54 215.3 196 61.7
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 7.3e-54 214.5 145 75.2
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 9.5e-54 214.2 145 73.1
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 2.8e-53 212.6 138 76.8
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 2.8e-53 212.6 146 74.7
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 3.6e-53 212.2 170 64.1
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 1.4e-52 210.3 171 67.3
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 2.3e-52 209.5 139 75.5
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 2.3e-52 209.5 151 71.5
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 4.0e-52 208.8 130 80.0
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.5e-51 206.8 146 74.0
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 3.4e-51 205.7 158 69.6
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 3.4e-51 205.7 158 69.6
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 3.4e-51 205.7 147 70.7
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 9.8e-51 204.1 130 77.7
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 9.8e-51 204.1 122 81.1
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 1.3e-50 203.8 147 70.1
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 1.7e-50 203.4 143 69.2
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 4.9e-50 201.8 203 57.1
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.1e-49 200.7 152 65.8
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.1e-49 200.7 130 79.2
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 1.1e-49 200.7 189 57.1
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 1.1e-49 200.7 130 75.4
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 1.4e-49 200.3 152 65.8
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.4e-49 200.3 145 72.4
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 1.9e-49 199.9 201 57.7
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 1.9e-49 199.9 133 75.9
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 1.9e-49 199.9 143 71.3
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 4.1e-49 198.7 189 57.1
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 1.2e-48 197.2 199 54.8
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 2.7e-48 196.1 201 57.2
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 4.6e-48 195.3 114 84.2
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 4.6e-48 195.3 131 71.0
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 3.0e-47 192.6 114 83.3
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.9e-47 192.2 141 69.5
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 6.6e-47 191.4 141 67.4
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 8.6e-47 191.0 127 73.2
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 8.6e-47 191.0 122 73.8
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 1.5e-46 190.3 136 69.9
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.5e-46 189.5 143 69.2
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 3.3e-46 189.1 167 58.7
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.6e-45 186.8 146 67.1
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 6.2e-45 184.9 124 73.4
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 6.2e-45 184.9 124 73.4
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 8.0e-45 184.5 125 72.8
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 4.0e-44 182.2 145 65.5
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 5.2e-44 181.8 158 62.0
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 6.8e-44 181.4 125 71.2
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 6.8e-44 181.4 125 71.2
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 6.8e-44 181.4 124 74.2
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 6.8e-44 181.4 138 64.5
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 6.8e-44 181.4 122 73.8
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 8.9e-44 181.0 189 57.7
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 8.9e-44 181.0 125 71.2
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.5e-43 180.3 161 61.5
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 1.5e-43 180.3 129 71.3
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 2.0e-43 179.9 129 70.5
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 5.8e-43 178.3 124 74.2
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 7.5e-43 177.9 124 70.2
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 2.9e-42 176.0 121 72.7
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 4.9e-42 175.3 154 59.1
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 1.4e-41 173.7 129 69.0
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 3.2e-41 172.6 192 53.6
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.4e-41 171.8 157 60.5
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 7.0e-41 171.4 121 71.1
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.3e-39 167.2 125 67.2
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 3.9e-39 165.6 145 61.4
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 3.9e-39 165.6 184 51.6
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 1.5e-38 163.7 131 65.6
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 4.3e-38 162.2 138 65.9
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 2.0e-35 153.3 185 51.4
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 2.0e-35 153.3 185 51.4
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.4e-35 152.5 146 58.2
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 1.2e-32 144.1 148 52.0
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 3.9e-31 139.0 123 56.9
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 2.8e-29 132.9 202 46.5
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 8.1e-29 131.3 123 56.1
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 1.8e-28 130.2 114 57.9
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.1e-24 116.7 86 66.3
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 4.6e-24 115.5 324 30.6
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 6.0e-24 115.2 86 65.1
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 6.0e-24 115.2 82 65.9
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.7e-23 113.6 82 64.6
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.4e-20 104.0 80 63.8
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.7e-10 70.5 53 67.9
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 8.4e-10 68.2 52 69.2
MCO16G381 Micromonas commoda HOM05D007282 ORTHO05D009214 1.5e-06 57.4 150 30.0
PRCOL_00005178 Prasinoderma coloniale HOM05D007282 ORTHO05D049198 1.5e-06 57.4 104 31.7
AagrBONN_evm.TU.Sc2ySwM_228.4714 Anthoceros agrestis HOM05D003651 ORTHO05D010159 5.6e-06 55.5 113 31.0


User provided reference genes

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