Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020255 Sechium edule HOM05D004973 ORTHO05D006119 8.8e-98 360.5 215 100.0
ClCG10G020720 Citrullus lanatus HOM05D004973 ORTHO05D006119 1.8e-58 229.9 216 74.1
MELO3C009296.2 Cucumis melo HOM05D004973 ORTHO05D006119 7.0e-55 218.0 216 64.4
CsaV3_3G035290 Cucumis sativus L. HOM05D004973 ORTHO05D006119 6.2e-51 204.9 216 61.6
QL07p045858 Quercus lobata HOM05D004973 ORTHO05D006119 1.8e-13 80.5 263 32.3
Haze_20682 Corylus avellana HOM05D004973 ORTHO05D006119 8.7e-13 78.2 241 32.0
Potri.006G216300 Populus trichocarpa HOM05D004973 ORTHO05D006119 1.1e-12 77.8 259 33.2
Hma1.2p1_0111F.1_g053560 Hydrangea macrophylla HOM05D004973 ORTHO05D006119 4.3e-12 75.9 249 33.3
COL.COLO4_10304 Corchorus olitorius HOM05D004973 ORTHO05D006119 9.6e-12 74.7 228 33.8
Gohir.A09G160200 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.6e-11 73.9 244 33.6
HanXRQChr14g0453421 Helianthus annuus HOM05D004973 ORTHO05D006119 2.1e-11 73.6 224 32.6
CiPaw.09G185000 Carya illinoinensis HOM05D004973 ORTHO05D006119 6.2e-11 72.0 239 33.1
Gorai.006G177300 Gossypium raimondii HOM05D004973 ORTHO05D006119 6.2e-11 72.0 250 32.8
Manes.08G000800 Manihot esculenta HOM05D004973 ORTHO05D006119 6.2e-11 72.0 255 31.8
Eucgr.A01206 Eucalyptus grandis HOM05D004973 ORTHO05D006119 1.4e-10 70.9 246 32.5
Ciclev10012401m.g Citrus clementina HOM05D004973 ORTHO05D006119 2.4e-10 70.1 240 32.5
FAN09G0990 Fragaria x ananassa HOM05D004973 ORTHO05D006119 5.3e-10 68.9 167 34.7
Gohir.D04G116800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 6.9e-10 68.6 222 30.6
Gorai.009G421700 Gossypium raimondii HOM05D004973 ORTHO05D006119 6.9e-10 68.6 218 30.7
Sabra06G0166700 Salix brachista HOM05D004973 ORTHO05D006119 9.0e-10 68.2 271 29.9
FAN14G1622 Fragaria x ananassa HOM05D004973 ORTHO05D006119 1.5e-09 67.4 168 35.1
FvH4_6g14910 Fragaria vesca HOM05D004973 ORTHO05D006119 2.6e-09 66.6 168 35.1
Manes.09G071500 Manihot esculenta HOM05D004973 ORTHO05D006119 2.6e-09 66.6 238 33.6
Potri.016G082700 Populus trichocarpa HOM05D004973 ORTHO05D006119 2.6e-09 66.6 85 48.2
FAN02G2240 Fragaria x ananassa HOM05D004973 ORTHO05D006119 3.4e-09 66.2 168 35.1
FAN05G3543 Fragaria x ananassa HOM05D004973 ORTHO05D006119 4.5e-09 65.9 168 34.5
Gohir.A04G077600 Gossypium hirsutum HOM05D004973 ORTHO05D006119 4.5e-09 65.9 225 30.2
CANSAT80G1895 Cannabis sativa HOM05D004973 ORTHO05D006119 7.6e-09 65.1 243 31.3
Thecc.05G050500 Theobroma cacao HOM05D004973 ORTHO05D006119 7.6e-09 65.1 267 30.3
GSVIVG01025573001 Vitis vinifera HOM05D004973 ORTHO05D009107 7.6e-09 65.1 216 31.5
CSS0000366 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 9.9e-09 64.7 245 29.4
CSS0008181 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 1.3e-08 64.3 245 29.4
MD12G1129800 Malus domestica HOM05D004973 ORTHO05D006119 1.3e-08 64.3 236 32.2
CiPaw.10G138900 Carya illinoinensis HOM05D004973 ORTHO05D006119 2.9e-08 63.2 224 30.8
Medtr1g067220 Medicago truncatula HOM05D004973 ORTHO05D006119 2.9e-08 63.2 232 28.4
Peaxi162Scf00472g00079 Petunia axillaris HOM05D004973 ORTHO05D006119 2.9e-08 63.2 234 31.6
Lj5g0023317 Lotus japonicus HOM05D004973 ORTHO05D006119 4.9e-08 62.4 250 28.4
Cpa.g.sc114.29 Carica papaya HOM05D004973 ORTHO05D006119 6.4e-08 62.0 226 30.5
arahy.Tifrunner.gnm1.ann1.C8BSPY Arachis hypogaea HOM05D004973 ORTHO05D006119 8.4e-08 61.6 243 30.5
Solyc10g084420.2 Solanum lycopersicum HOM05D004973 ORTHO05D006119 8.4e-08 61.6 218 30.3
ClCG04G008700 Citrullus lanatus HOM05D004973 ORTHO05D006119 1.1e-07 61.2 81 48.1
Dinv37236 Davidia involucrata HOM05D004973 ORTHO05D006119 1.4e-07 60.8 256 31.2
Prupe.6G245100 Prunus persica HOM05D004973 ORTHO05D009107 2.4e-07 60.1 259 29.3
Migut.J00395 Erythranthe guttata HOM05D004973 ORTHO05D006119 3.2e-07 59.7 211 27.0
Nn2g12943 Nelumbo nucifera HOM05D004973 ORTHO05D006119 3.2e-07 59.7 263 29.7
Gohir.D09G155800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 5.5e-07 58.9 79 48.1
RcHm_v2.0_Chr3g0468111 Rosa chinensis HOM05D004973 ORTHO05D006119 5.5e-07 58.9 149 33.6
TAR623G0749 Trochodendron aralioides HOM05D004973 ORTHO05D006119 9.3e-07 58.2 114 38.6
CsaV3_4G024460 Cucumis sativus L. HOM05D004973 ORTHO05D006119 1.2e-06 57.8 81 46.9
Sopen10g033860 Solanum pennellii HOM05D004973 ORTHO05D006119 1.6e-06 57.4 220 28.2
arahy.Tifrunner.gnm1.ann1.P2DQEA Arachis hypogaea HOM05D004973 ORTHO05D006119 2.7e-06 56.6 255 29.0
Dinv35683 Davidia involucrata HOM05D004973 ORTHO05D006119 2.7e-06 56.6 256 27.0
ECA238G2925 Erigeron canadensis HOM05D004973 ORTHO05D006119 3.5e-06 56.2 100 40.0
Nn2g10587 Nelumbo nucifera HOM05D004973 ORTHO05D006119 4.6e-06 55.8 142 33.8
BcaNung06612 Brassica carinata HOM05D004973 ORTHO05D006119 6.0e-06 55.5 84 42.9
Atru.chr8.2512 Acer truncatum HOM05D004973 ORTHO05D006119 7.9e-06 55.1 135 37.0
SalBow4G1465 Salvia bowleyana HOM05D004973 ORTHO05D006119 7.9e-06 55.1 126 36.5


User provided reference genes

Program Settings