Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020219 Sechium edule HOM05D008052 ORTHO05D010155 4.2e-116 421.4 216 100.0
Sed0004902 Sechium edule HOM05D008052 ORTHO05D010155 1.6e-78 296.6 214 75.2
MELO3C004280.2 Cucumis melo HOM05D008052 ORTHO05D010155 1.9e-76 289.7 210 72.4
ClCG02G015920 Citrullus lanatus HOM05D008052 ORTHO05D010155 5.2e-74 281.6 209 71.8
CsaV3_2G005120 Cucumis sativus L. HOM05D008052 ORTHO05D000003 2.0e-70 269.6 207 69.6
Prupe.6G328200 Prunus persica HOM05D008052 ORTHO05D010155 1.6e-27 127.1 215 38.6
CANSAT54G0621 Cannabis sativa HOM05D008052 ORTHO05D010155 7.9e-22 108.2 166 38.0
Sabra13G0025900 Salix brachista HOM05D008052 ORTHO05D010155 1.3e-21 107.5 210 37.1
Thecc.05G305400 Theobroma cacao HOM05D008052 ORTHO05D010155 3.9e-21 105.9 212 37.7
Ciclev10003106m.g Citrus clementina HOM05D008052 ORTHO05D010155 3.3e-20 102.8 207 36.2
Potri.013G024500 Populus trichocarpa HOM05D008052 ORTHO05D010155 3.3e-20 102.8 210 35.2
FAN05G1355 Fragaria x ananassa HOM05D000001 ORTHO05D000003 9.6e-20 101.3 197 36.0
Manes.09G165300 Manihot esculenta HOM05D008052 ORTHO05D010155 9.6e-20 101.3 173 39.9
FAN05G4790 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.3e-19 100.9 197 36.0
TAR633G0175 Trochodendron aralioides HOM05D008052 ORTHO05D010155 6.2e-19 98.6 174 40.2
Duzib106G0088 Durio zibethinus HOM05D008052 ORTHO05D010155 1.4e-18 97.4 195 37.9
TWI56G0838 Tripterygium wilfordii HOM05D008052 ORTHO05D010155 1.4e-18 97.4 205 34.6
Nitab4.5_0004570g0050 Nicotiana tabacum HOM05D008052 ORTHO05D010155 2.0e-17 93.6 208 38.9
Gorai.007G342900 Gossypium raimondii HOM05D008052 ORTHO05D010155 1.0e-16 91.3 204 36.8
Atru.chr2.447 Acer truncatum HOM05D008052 ORTHO05D010155 1.3e-16 90.9 214 35.0
FvH4_6g05580 Fragaria vesca HOM05D008052 ORTHO05D010155 1.7e-16 90.5 197 33.5
MD12G1221400 Malus domestica HOM05D008052 ORTHO05D010155 1.7e-16 90.5 196 32.7
Gohir.D11G310900 Gossypium hirsutum HOM05D008052 ORTHO05D010155 2.2e-16 90.1 232 37.1
PGR031G3742 Punica granatum HOM05D008052 ORTHO05D010155 2.9e-16 89.7 212 35.8
TAR362G0883 Trochodendron aralioides HOM05D008052 ORTHO05D010155 3.8e-16 89.4 183 37.2
Gohir.A11G296000 Gossypium hirsutum HOM05D008052 ORTHO05D010155 4.9e-16 89.0 204 35.8
Nn4g26221 Nelumbo nucifera HOM05D008052 ORTHO05D010155 8.4e-16 88.2 171 36.8
Nitab4.5_0000743g0110 Nicotiana tabacum HOM05D008052 ORTHO05D010155 1.4e-15 87.4 190 41.1
Cpa.g.sc48.31 Carica papaya HOM05D008052 ORTHO05D010155 9.3e-15 84.7 174 37.9
RcHm_v2.0_Chr3g0454361 Rosa chinensis HOM05D008052 ORTHO05D010155 2.1e-14 83.6 178 32.0
FAN14G3020 Fragaria x ananassa HOM05D008052 ORTHO05D010155 1.0e-13 81.3 156 35.3
MD04G1207300 Malus domestica HOM05D008052 ORTHO05D010155 1.0e-13 81.3 195 33.3
MSTRG.28007 Avicennia marina HOM05D008052 ORTHO05D010155 1.3e-13 80.9 188 33.0
Sp2g20660 Schrenkiella parvula HOM05D008052 ORTHO05D010155 1.3e-13 80.9 184 33.2
AT5G27440 Arabidopsis thaliana HOM05D008052 ORTHO05D010155 5.1e-13 79.0 192 33.3
Thhalv10005402m.g Eutrema salsugineum HOM05D008052 ORTHO05D010155 1.1e-12 77.8 196 32.1
Sopen12g003550 Solanum pennellii HOM05D008052 ORTHO05D010155 1.5e-12 77.4 185 39.5
THA.LOC104802806 Tarenaya hassleriana HOM05D008052 ORTHO05D010155 1.5e-12 77.4 168 38.1
QL02p094100 Quercus lobata HOM05D008052 ORTHO05D010155 1.9e-12 77.0 150 37.3
Migut.N01951 Erythranthe guttata HOM05D008052 ORTHO05D010155 2.5e-12 76.6 173 35.8
PGSC0003DMG400000290 Solanum tuberosum HOM05D008052 ORTHO05D010155 4.3e-12 75.9 217 35.9
Sc09g0003250 Simmondsia chinensis HOM05D008052 ORTHO05D010155 7.4e-12 75.1 184 33.7
SalBow3G2994 Salvia bowleyana HOM05D008052 ORTHO05D010155 1.6e-11 73.9 178 33.1
CARHR186050 Cardamine hirsuta HOM05D008052 ORTHO05D010155 2.1e-11 73.6 208 28.8
A06p37460 Brassica napus HOM05D008052 ORTHO05D010155 6.3e-11 72.0 169 33.1
BraA06t26670Z Brassica rapa HOM05D008052 ORTHO05D010155 6.3e-11 72.0 169 33.1
Cfa012653 Carpinus fangiana HOM05D008052 ORTHO05D010155 6.3e-11 72.0 87 47.1
Haze_04211 Corylus avellana HOM05D008052 ORTHO05D010155 1.4e-10 70.9 142 34.5
Cc02_g33610 Coffea canephora HOM05D008052 ORTHO05D010155 4.1e-10 69.3 158 38.0
COL.COLO4_13498 Corchorus olitorius HOM05D008052 ORTHO05D010155 9.0e-10 68.2 182 35.2
C07p40900 Brassica napus HOM05D008052 ORTHO05D010155 1.2e-09 67.8 168 34.5
Cfa006565 Carpinus fangiana HOM05D008052 ORTHO05D010155 1.2e-09 67.8 142 33.1
Psat0s1377g0280 Pisum sativum HOM05D014832 ORTHO05D016666 1.2e-09 67.8 203 34.0
FAN14G1634 Fragaria x ananassa HOM05D008052 ORTHO05D010155 3.4e-09 66.2 158 31.6
CiPaw.07G021600 Carya illinoinensis HOM05D008052 ORTHO05D010155 1.0e-08 64.7 141 34.0
BcaNung02451 Brassica carinata HOM05D008052 ORTHO05D010155 1.3e-08 64.3 180 32.8
BolC7t44618H Brassica oleracea HOM05D008052 ORTHO05D010155 1.3e-08 64.3 180 32.8
Ah.06g189190 Amaranthus hybridus HOM05D038607 ORTHO05D010155 1.4e-07 60.8 196 35.2
Solyc12g008610.3 Solanum lycopersicum HOM05D008052 ORTHO05D010155 2.5e-07 60.1 98 43.9
Carub.0006s2509 Capsella rubella HOM05D008052 ORTHO05D010155 3.2e-07 59.7 226 29.2
Ah.05g168010 Amaranthus hybridus HOM05D038607 ORTHO05D010155 1.6e-06 57.4 196 34.7
PSO170G6008 Papaver somniferum HOM05D008052 ORTHO05D010155 1.6e-06 57.4 162 33.3
Phvul.007G181200 Phaseolus vulgaris HOM05D014832 ORTHO05D016666 1.6e-06 57.4 210 32.9
Lj5g0006973 Lotus japonicus HOM05D014832 ORTHO05D016666 3.6e-06 56.2 168 34.5


User provided reference genes

Program Settings