Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 1.5e-236 822.4 405 100.0
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 8.2e-206 720.3 386 90.4
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 1.4e-205 719.5 385 90.1
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 5.3e-205 717.6 402 88.6
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 1.9e-194 682.6 387 85.5
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 6.3e-190 667.5 390 82.3
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 8.5e-187 657.1 382 83.0
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 1.9e-186 656.0 383 81.7
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 4.2e-186 654.8 387 81.7
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.6e-185 652.9 383 81.7
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 2.1e-185 652.5 384 81.0
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 2.1e-185 652.5 382 82.2
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 2.7e-185 652.1 382 83.0
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 6.1e-185 651.0 383 81.5
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 8.0e-185 650.6 383 81.2
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 3.0e-184 648.7 384 81.8
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 3.0e-184 648.7 382 81.9
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 8.8e-184 647.1 383 80.9
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 1.2e-183 646.7 381 81.9
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.5e-183 646.4 386 80.3
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 2.0e-183 646.0 383 80.7
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 2.0e-183 646.0 378 82.0
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 9.8e-183 643.7 392 79.1
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 3.7e-182 641.7 389 79.2
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 3.7e-182 641.7 384 80.7
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 4.8e-182 641.3 380 80.8
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 8.3e-182 640.6 382 79.1
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 9.1e-181 637.1 391 79.8
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 2.7e-180 635.6 414 75.6
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 4.5e-180 634.8 425 73.4
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 5.9e-180 634.4 404 76.0
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 7.7e-180 634.0 382 79.3
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.0e-179 633.6 382 79.3
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 2.3e-179 632.5 382 79.3
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 5.0e-179 631.3 382 78.8
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 6.5e-179 630.9 390 78.2
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.2e-177 626.7 385 78.2
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 4.7e-177 624.8 384 77.6
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.4e-176 623.2 383 79.1
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 1.8e-176 622.9 382 77.5
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 3.0e-176 622.1 382 78.8
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 3.0e-176 622.1 382 78.5
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 4.0e-176 621.7 385 77.9
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 4.0e-176 621.7 384 76.8
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 6.8e-176 620.9 382 78.0
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.5e-175 619.8 383 76.2
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 2.6e-175 619.0 381 79.0
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 3.4e-175 618.6 390 77.2
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 7.5e-175 617.5 383 77.5
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 2.2e-174 615.9 384 77.1
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 2.2e-174 615.9 384 77.3
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 2.2e-174 615.9 387 77.5
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 4.9e-174 614.8 382 76.2
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 1.1e-173 613.6 387 77.3
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 1.4e-173 613.2 383 76.8
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 1.8e-173 612.8 383 77.3
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 2.4e-173 612.5 383 76.2
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 3.1e-173 612.1 386 76.2
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 9.2e-173 610.5 383 76.2
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 1.2e-172 610.1 381 75.6
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 2.0e-172 609.4 383 76.2
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 2.7e-172 609.0 409 73.1
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 2.7e-172 609.0 383 76.0
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 5.9e-172 607.8 383 76.0
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 5.9e-172 607.8 385 76.6
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 1.7e-171 606.3 378 76.7
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 1.7e-171 606.3 385 76.6
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 2.3e-171 605.9 383 76.0
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 2.9e-171 605.5 383 75.7
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 2.9e-171 605.5 386 76.2
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 6.6e-171 604.4 381 75.3
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 1.1e-170 603.6 389 74.0
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 1.5e-170 603.2 384 76.0
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 6.4e-166 587.8 337 83.7
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 1.6e-161 573.2 389 73.3
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 1.8e-160 569.7 336 80.7
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 8.6e-155 550.8 382 72.8
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.7e-150 536.6 353 73.7
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 8.3e-150 534.3 338 76.3
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 1.0e-147 527.3 382 70.7
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 5.1e-147 525.0 348 74.1
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 3.6e-145 518.8 385 68.3
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 2.0e-143 513.1 380 63.9
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 3.8e-142 508.8 323 75.9
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 2.4e-141 506.1 387 67.2
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 1.2e-140 503.8 314 77.4
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 2.1e-140 503.1 374 64.2
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 8.7e-139 497.7 365 67.1
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 8.1e-137 491.1 383 65.3
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.0e-123 447.6 288 74.3
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 8.7e-123 444.5 391 59.1
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 4.5e-111 405.6 382 55.2
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 2.9e-102 376.3 421 47.5
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.1e-101 374.4 246 72.4
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 1.7e-89 334.0 262 63.7
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 2.2e-89 333.6 204 76.5
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 6.3e-89 332.0 262 63.7
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 1.1e-88 331.3 202 76.7
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 3.4e-87 326.2 390 46.7
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 2.8e-81 306.6 226 70.4
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 1.7e-78 297.4 222 64.0
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 6.5e-70 268.9 210 64.8
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 3.5e-63 246.5 179 67.6
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 3.3e-61 240.0 268 52.2
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 5.0e-54 216.1 165 64.8
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 8.6e-54 215.3 387 38.8
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 4.4e-34 149.8 90 81.1
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 2.2e-33 147.5 93 76.3
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 1.6e-28 131.3 89 73.0
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.7e-20 103.2 67 68.7
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 9.9e-18 95.5 58 72.4
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 2.1e-12 77.8 42 88.1


User provided reference genes

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