Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020146 Sechium edule HOM05D006808 ORTHO05D008610 1.3e-79 299.7 155 100.0
ClCG07G005100 Citrullus lanatus HOM05D006808 ORTHO05D008610 2.1e-48 196.1 123 83.7
CsaV3_5G010920 Cucumis sativus L. HOM05D006808 ORTHO05D008610 3.9e-47 191.8 123 82.9
MELO3C020146.2 Cucumis melo HOM05D006808 ORTHO05D008610 8.7e-47 190.7 123 82.1
Rhsim03G0152000 Rhododendron simsii HOM05D006808 ORTHO05D008610 7.1e-41 171.0 119 73.1
Manes.07G140900 Manihot esculenta HOM05D006808 ORTHO05D008610 1.2e-40 170.2 111 79.3
QL08p064804 Quercus lobata HOM05D006808 ORTHO05D008610 1.2e-40 170.2 111 77.5
Duzib114G0525 Durio zibethinus HOM05D006808 ORTHO05D008610 6.0e-40 167.9 110 76.4
Gohir.A05G403200 Gossypium hirsutum HOM05D006808 ORTHO05D008610 6.0e-40 167.9 110 76.4
Gohir.D04G012300 Gossypium hirsutum HOM05D006808 ORTHO05D008610 6.0e-40 167.9 110 76.4
Thecc.10G181400 Theobroma cacao HOM05D006808 ORTHO05D008610 6.0e-40 167.9 110 75.5
FAN03G2408 Fragaria x ananassa HOM05D006808 ORTHO05D008610 1.3e-39 166.8 119 71.4
FAN10G3082 Fragaria x ananassa HOM05D006808 ORTHO05D008610 1.3e-39 166.8 119 71.4
PGR142G2065 Punica granatum HOM05D006808 ORTHO05D008610 1.3e-39 166.8 119 71.4
COL.COLO4_08324 Corchorus olitorius HOM05D006808 ORTHO05D008610 1.7e-39 166.4 110 74.5
FvH4_7g25890 Fragaria vesca HOM05D006808 ORTHO05D008610 1.7e-39 166.4 119 71.4
FAN06G1576 Fragaria x ananassa HOM05D006808 ORTHO05D008610 1.7e-39 166.4 119 71.4
Prupe.2G263900 Prunus persica HOM05D006808 ORTHO05D008610 2.3e-39 166.0 111 76.6
FAN01G2160 Fragaria x ananassa HOM05D006808 ORTHO05D008610 3.0e-39 165.6 119 70.6
vmacro06890 Vaccinium macrocarpon HOM05D006808 ORTHO05D008610 3.0e-39 165.6 111 74.8
TAR623G0123 Trochodendron aralioides HOM05D006808 ORTHO05D008610 3.9e-39 165.2 113 75.2
Actinidia13650 Actinidia chinensis HOM05D006808 ORTHO05D008610 5.1e-39 164.9 119 72.3
Potri.019G057800 Populus trichocarpa HOM05D006808 ORTHO05D008610 8.7e-39 164.1 111 75.7
Atru.chr12.177 Acer truncatum HOM05D006808 ORTHO05D008610 1.1e-38 163.7 113 72.6
GSVIVG01032685001 Vitis vinifera HOM05D006808 ORTHO05D008610 1.1e-38 163.7 111 73.9
Oeu044164.1 Olea europaea HOM05D006808 ORTHO05D008610 2.5e-38 162.5 110 74.5
CiPaw.02G198800 Carya illinoinensis HOM05D006808 ORTHO05D008610 3.3e-38 162.2 111 73.9
Duzib128G2014 Durio zibethinus HOM05D006808 ORTHO05D008610 4.3e-38 161.8 110 72.7
Aqoxy4G02407 Aquilegia oxysepala HOM05D006808 ORTHO05D008610 1.6e-37 159.8 111 72.1
Dinv34481 Davidia involucrata HOM05D006808 ORTHO05D008610 1.6e-37 159.8 111 73.9
Sabra19G0073500 Salix brachista HOM05D006808 ORTHO05D008610 2.1e-37 159.5 119 68.9
arahy.Tifrunner.gnm1.ann1.SNS0I7 Arachis hypogaea HOM05D006808 ORTHO05D008610 3.6e-37 158.7 111 73.9
arahy.Tifrunner.gnm1.ann1.WYW97W Arachis hypogaea HOM05D006808 ORTHO05D008610 3.6e-37 158.7 111 73.9
MBI03_g08370_MAGBIO Magnolia biondii HOM05D006808 ORTHO05D008610 4.8e-37 158.3 127 68.5
Sp6g37560 Schrenkiella parvula HOM05D006808 ORTHO05D008610 8.1e-37 157.5 111 69.4
CANSAT56G2327 Cannabis sativa HOM05D006808 ORTHO05D008610 1.1e-36 157.1 112 71.4
Cpa.g.sc19.60 Carica papaya HOM05D006808 ORTHO05D008610 1.4e-36 156.8 113 73.5
Nn5g26853 Nelumbo nucifera HOM05D006808 ORTHO05D008610 1.4e-36 156.8 119 64.7
Nn2g10310 Nelumbo nucifera HOM05D006808 ORTHO05D008610 1.8e-36 156.4 114 71.1
PSO170G3172 Papaver somniferum HOM05D006808 ORTHO05D008610 3.1e-36 155.6 114 72.8
MSTRG.172 Avicennia marina HOM05D006808 ORTHO05D008610 4.0e-36 155.2 129 60.5
Cc02_g05390 Coffea canephora HOM05D006808 ORTHO05D008610 4.0e-36 155.2 112 68.8
Lj8A55T83 Lonicera japonica HOM05D006808 ORTHO05D008610 4.0e-36 155.2 111 72.1
CARHR207960 Cardamine hirsuta HOM05D006808 ORTHO05D008610 6.9e-36 154.5 111 68.5
VMungo1309G1960 Vigna mungo HOM05D006808 ORTHO05D008610 6.9e-36 154.5 109 69.7
Ca_29954_v3 Cicer arietinum L. HOM05D006808 ORTHO05D008610 9.0e-36 154.1 110 73.6
ATR1127G203 Amborella trichopoda HOM05D006808 ORTHO05D008610 1.2e-35 153.7 109 67.0
Ca_16867_v3 Cicer arietinum L. HOM05D006808 ORTHO05D008610 1.2e-35 153.7 109 74.3
HanXRQChr08g0221541 Helianthus annuus HOM05D006808 ORTHO05D008610 1.2e-35 153.7 110 72.7
Medtr3g093980 Medicago truncatula HOM05D006808 ORTHO05D008610 1.5e-35 153.3 110 70.0
TWI53G1993 Tripterygium wilfordii HOM05D006808 ORTHO05D008610 2.6e-35 152.5 113 71.7
Os12g0115700 Oryza sativa ssp. japonica HOM05D006808 ORTHO05D008610 3.4e-35 152.1 108 68.5
CDE06G0937 Ceratophyllum demersum HOM05D006808 ORTHO05D008610 4.5e-35 151.8 113 63.7
Thhalv10014675m.g Eutrema salsugineum HOM05D006808 ORTHO05D008610 4.5e-35 151.8 111 67.6
PSO017G4017 Papaver somniferum HOM05D006808 ORTHO05D008610 4.5e-35 151.8 114 68.4
PSO017G4891 Papaver somniferum HOM05D006808 ORTHO05D008610 4.5e-35 151.8 114 68.4
PSO017G6829 Papaver somniferum HOM05D006808 ORTHO05D008610 4.5e-35 151.8 114 68.4
A10p30920 Brassica napus HOM05D006808 ORTHO05D008610 5.8e-35 151.4 108 67.6
BraA10t45137Z Brassica rapa HOM05D006808 ORTHO05D008610 5.8e-35 151.4 108 67.6
ECA233G3418 Erigeron canadensis HOM05D006808 ORTHO05D008610 5.8e-35 151.4 112 72.3
Lalb_Chr08g0239161 Lupinus albus HOM05D006808 ORTHO05D008610 5.8e-35 151.4 106 72.6
Phvul.009G143100 Phaseolus vulgaris HOM05D006808 ORTHO05D008610 5.8e-35 151.4 109 68.8
Solyc05g052240.3 Solanum lycopersicum HOM05D006808 ORTHO05D008610 5.8e-35 151.4 125 64.0
AT5G05270 Arabidopsis thaliana HOM05D006808 ORTHO05D008610 7.6e-35 151.0 111 66.7
Glyma.04G222400 Glycine max HOM05D006808 ORTHO05D008610 7.6e-35 151.0 109 68.8
SGA_v2.0_scaffold384G50428 Striga asiatica HOM05D006808 ORTHO05D008610 7.6e-35 151.0 109 70.6
AL6G15110 Arabidopsis lyrata HOM05D006808 ORTHO05D008610 9.9e-35 150.6 111 65.8
C09p71430 Brassica napus HOM05D006808 ORTHO05D008610 9.9e-35 150.6 108 67.6
BolC9t59906H Brassica oleracea HOM05D006808 ORTHO05D008610 9.9e-35 150.6 108 67.6
Carub.0006s0420 Capsella rubella HOM05D006808 ORTHO05D008610 9.9e-35 150.6 108 67.6
Os11g0116300 Oryza sativa ssp. japonica HOM05D006808 ORTHO05D008610 9.9e-35 150.6 108 67.6
Psat5g069280 Pisum sativum HOM05D006808 ORTHO05D008610 9.9e-35 150.6 110 69.1
Sopen05g030780 Solanum pennellii HOM05D006808 ORTHO05D008610 9.9e-35 150.6 125 64.0
CDE07G0319 Ceratophyllum demersum HOM05D006808 ORTHO05D008610 1.7e-34 149.8 113 65.5
TPR.G16134 Trifolium pratense HOM05D006808 ORTHO05D008610 1.7e-34 149.8 134 59.7
Aa31LG11G6120 Aethionema arabicum HOM05D006808 ORTHO05D008610 2.9e-34 149.1 111 66.7
CAN.G203.51 Capsicum annuum HOM05D006808 ORTHO05D008610 2.9e-34 149.1 110 68.2
Lsat_1_v5_gn_8_11480 Lactuca sativa HOM05D006808 ORTHO05D008610 2.9e-34 149.1 112 70.5
SalBow3G3573 Salvia bowleyana HOM05D006808 ORTHO05D008610 4.9e-34 148.3 113 67.3
TWI73G0462 Tripterygium wilfordii HOM05D006808 ORTHO05D008610 4.9e-34 148.3 113 69.0
Lj1g0023491 Lotus japonicus HOM05D006808 ORTHO05D008610 8.4e-34 147.5 109 67.9
Glyma.06G143000 Glycine max HOM05D006808 ORTHO05D008610 1.1e-33 147.1 109 68.8
Lalb_Chr23g0272211 Lupinus albus HOM05D006808 ORTHO05D008610 4.6e-32 141.7 122 63.1
DCAR_019805 Daucus carota HOM05D006808 ORTHO05D008610 1.8e-31 139.8 112 64.3
Zm00001eb163860 Zea mays HOM05D006808 ORTHO05D008610 3.9e-31 138.7 113 65.5
Sc11g0005840 Simmondsia chinensis HOM05D006808 ORTHO05D008610 5.6e-30 134.8 111 65.8
MD01G1167300 Malus domestica HOM05D006808 ORTHO05D008610 1.6e-29 133.3 88 73.9
HPP92_015591 Vanilla planifolia HOM05D006808 ORTHO05D008610 6.2e-29 131.3 108 62.0
Hund15819 Selenicereus undatus HOM05D006808 ORTHO05D008610 1.4e-28 130.2 118 61.0
EL10Ac2g02642 Beta vulgaris HOM05D006808 ORTHO05D008610 9.0e-28 127.5 129 55.8
Ah.12g064370 Amaranthus hybridus HOM05D006808 ORTHO05D008610 1.3e-26 123.6 128 54.7
SHI28909 Sapria himalayana HOM05D006808 ORTHO05D008610 1.3e-26 123.6 109 54.1
MD07G1233400 Malus domestica HOM05D006808 ORTHO05D008610 8.4e-26 120.9 111 60.4
Nitab4.5_0000375g0270 Nicotiana tabacum HOM05D006808 ORTHO05D008610 1.0e-23 114.0 110 58.2
unitig_736.g22963 Utricularia gibba HOM05D001179 ORTHO05D003685 5.1e-23 111.7 108 54.6
Nitab4.5_0002279g0030 Nicotiana tabacum HOM05D006808 ORTHO05D008610 2.5e-22 109.4 110 58.2
Haze_17355 Corylus avellana HOM05D006808 ORTHO05D008610 2.1e-21 106.3 100 59.0
Lsat_1_v5_gn_6_40701 Lactuca sativa HOM05D006808 ORTHO05D008610 2.4e-20 102.8 114 49.1
SMO358G0139 Selaginella moellendorffii HOM05D006808 ORTHO05D008610 5.7e-14 81.6 107 42.1
Pp3c4_25770 Physcomitrium patens HOM05D006808 ORTHO05D008610 1.3e-13 80.5 112 42.9
Mapoly0175s0004 Marchantia polymorpha HOM05D006808 ORTHO05D008610 1.8e-12 76.6 107 41.1
Pp3c26_4040 Physcomitrium patens HOM05D006808 ORTHO05D008610 2.6e-11 72.8 114 38.6
PSO017G1798 Papaver somniferum HOM05D006808 ORTHO05D008610 7.2e-09 64.7 62 58.1
MD00G1021400 Malus domestica HOM05D006808 ORTHO05D008610 9.4e-09 64.3 42 81.0
Lsat_1_v5_gn_6_40681 Lactuca sativa HOM05D006808 ORTHO05D008610 2.5e-06 56.2 81 44.4


User provided reference genes

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