Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 1.0e-114 416.8 208 100.0
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 7.5e-78 294.3 223 72.6
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 5.3e-76 288.1 223 71.7
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 9.1e-76 287.3 267 62.5
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 1.2e-75 287.0 267 62.2
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 8.6e-50 201.1 218 54.6
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 3.1e-47 192.6 234 48.7
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 6.8e-47 191.4 218 54.1
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 1.5e-46 190.3 223 52.9
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 1.5e-46 190.3 228 53.1
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 4.4e-46 188.7 225 50.2
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 3.7e-45 185.7 232 51.3
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.1e-44 184.1 208 54.8
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 1.9e-44 183.3 227 49.8
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 2.4e-44 183.0 210 51.0
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 2.7e-43 179.5 252 49.2
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 2.7e-43 179.5 201 53.2
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 3.5e-43 179.1 211 49.8
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 1.3e-42 177.2 227 50.7
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 3.0e-42 176.0 220 48.6
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 3.0e-42 176.0 209 52.6
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 6.6e-42 174.9 237 47.3
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 1.5e-41 173.7 199 53.8
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.9e-41 173.3 218 50.5
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 2.5e-41 172.9 220 49.5
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 4.3e-41 172.2 218 50.0
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 2.1e-40 169.9 182 53.8
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.1e-40 169.9 199 52.8
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 2.8e-40 169.5 194 52.1
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 1.1e-39 167.5 230 47.8
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 1.4e-39 167.2 212 48.6
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.8e-39 166.8 217 45.6
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 2.3e-39 166.4 193 52.8
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 2.3e-39 166.4 192 49.5
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 4.0e-39 165.6 210 51.4
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 6.8e-39 164.9 222 48.2
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 1.2e-38 164.1 209 49.8
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 1.2e-38 164.1 219 48.4
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 1.2e-38 164.1 224 48.7
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 2.6e-38 162.9 185 50.8
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 2.6e-38 162.9 185 50.8
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 5.8e-38 161.8 195 53.8
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 2.2e-37 159.8 206 46.6
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 2.9e-37 159.5 192 53.6
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 4.9e-37 158.7 197 54.3
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 6.4e-37 158.3 223 47.5
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.1e-36 157.5 213 46.0
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 1.9e-36 156.8 209 45.5
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 5.4e-36 155.2 212 49.5
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 1.2e-35 154.1 208 47.6
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 2.1e-35 153.3 212 43.9
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 2.1e-35 153.3 201 49.3
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 2.1e-35 153.3 199 49.7
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 6.0e-35 151.8 207 47.8
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 6.0e-35 151.8 231 45.9
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 7.8e-35 151.4 193 49.2
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 1.3e-34 150.6 235 44.3
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 1.7e-34 150.2 240 45.0
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 3.9e-34 149.1 208 48.6
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 6.6e-34 148.3 248 42.3
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 8.6e-34 147.9 205 47.8
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 1.9e-33 146.7 198 47.0
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 3.3e-33 146.0 236 43.6
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 3.3e-33 146.0 275 41.1
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 5.6e-33 145.2 223 47.1
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 5.6e-33 145.2 223 47.1
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 5.6e-33 145.2 253 42.3
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 1.6e-32 143.7 224 46.4
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 1.6e-32 143.7 224 46.4
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 2.8e-32 142.9 213 44.1
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.1e-31 141.0 202 46.5
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 1.4e-31 140.6 227 45.8
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.4e-31 140.6 195 45.6
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.4e-31 139.8 193 46.6
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 2.4e-31 139.8 223 47.1
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 4.0e-31 139.0 233 41.2
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 5.2e-31 138.7 178 46.1
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 6.8e-31 138.3 193 46.6
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 1.2e-30 137.5 200 46.5
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 1.2e-30 137.5 189 47.6
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 4.4e-30 135.6 180 48.3
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 9.9e-30 134.4 196 42.9
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 1.7e-29 133.7 183 47.5
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.2e-29 133.3 232 42.2
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 2.2e-29 133.3 279 37.6
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 2.2e-29 133.3 214 40.2
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 4.9e-29 132.1 281 36.7
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.9e-28 130.2 189 40.7
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.9e-28 130.2 189 40.7
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 4.2e-28 129.0 237 41.4
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 4.2e-28 129.0 268 41.0
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 5.4e-28 128.6 220 43.6
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 3.5e-27 125.9 269 34.9
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 3.0e-26 122.9 184 40.8
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 5.6e-25 118.6 269 35.7
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 1.7e-21 107.1 198 38.9
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 6.4e-21 105.1 196 40.3
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 4.2e-20 102.4 166 42.2
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 1.6e-16 90.5 99 50.5
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.6e-16 90.5 170 38.2
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 1.5e-14 84.0 122 45.1
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.6e-08 63.9 94 41.5
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 4.8e-08 62.4 61 54.1
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 4.8e-08 62.4 61 54.1
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 2.6e-06 56.6 46 58.7


User provided reference genes

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