Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 2.1e-230 802.0 397 100.0
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 2.4e-194 682.2 404 83.9
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 8.9e-189 663.7 396 82.6
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 2.8e-158 562.4 394 70.3
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 4.8e-158 561.6 364 74.2
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 6.2e-158 561.2 367 73.3
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 6.2e-158 561.2 367 71.7
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 1.8e-157 559.7 406 69.5
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 2.9e-155 552.4 367 71.7
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.9e-155 552.4 367 71.7
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 3.8e-155 552.0 367 71.7
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 3.8e-155 552.0 374 71.4
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 1.1e-154 550.4 364 71.7
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 1.9e-154 549.7 364 72.5
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 2.5e-154 549.3 367 69.5
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.5e-154 549.3 367 71.4
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 4.2e-154 548.5 388 68.0
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 4.2e-154 548.5 367 69.8
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 4.2e-154 548.5 367 70.8
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 7.1e-154 547.7 367 71.4
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 9.3e-154 547.4 388 68.8
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 1.6e-153 546.6 367 69.5
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 1.6e-153 546.6 388 68.8
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 2.1e-153 546.2 367 68.9
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 5.7e-151 538.1 369 71.0
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 7.4e-151 537.7 392 68.6
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 2.8e-150 535.8 360 71.9
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 3.7e-150 535.4 366 71.6
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 3.7e-150 535.4 366 71.6
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 6.3e-150 534.6 369 68.6
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 6.3e-150 534.6 367 68.7
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 1.4e-149 533.5 368 69.8
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 1.8e-149 533.1 360 70.3
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 6.9e-149 531.2 359 69.9
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 9.0e-149 530.8 383 67.1
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 2.6e-148 529.3 369 68.3
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 2.6e-148 529.3 365 68.2
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 2.6e-148 529.3 379 67.3
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 7.7e-148 527.7 367 68.9
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 7.7e-148 527.7 382 68.1
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 1.0e-147 527.3 364 67.9
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 1.3e-147 526.9 365 68.8
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 1.7e-147 526.6 390 66.9
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 2.2e-147 526.2 368 69.6
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 8.5e-147 524.2 364 69.0
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 1.1e-146 523.9 378 68.5
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 1.9e-146 523.1 374 68.2
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 1.9e-146 523.1 360 68.3
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 2.5e-146 522.7 381 65.9
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 3.2e-146 522.3 366 68.0
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 3.2e-146 522.3 364 67.9
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 4.2e-146 521.9 380 67.1
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 4.2e-146 521.9 380 67.1
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 4.2e-146 521.9 380 67.1
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 9.4e-146 520.8 377 66.6
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 2.7e-145 519.2 379 66.0
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 2.7e-145 519.2 366 67.5
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 2.7e-145 519.2 376 66.5
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 3.6e-145 518.8 402 64.4
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 3.6e-145 518.8 367 67.0
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 6.1e-145 518.1 367 65.9
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 6.1e-145 518.1 367 65.9
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 7.9e-145 517.7 364 68.4
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 1.4e-144 516.9 367 67.3
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 1.8e-144 516.5 369 66.7
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 2.3e-144 516.2 364 67.3
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 3.0e-144 515.8 380 66.8
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 3.0e-144 515.8 380 66.8
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 3.0e-144 515.8 376 66.8
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 5.1e-144 515.0 378 65.3
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 6.7e-144 514.6 369 66.7
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 1.5e-143 513.5 381 65.1
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 1.5e-143 513.5 379 65.2
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 2.0e-143 513.1 367 67.0
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 2.0e-143 513.1 364 67.6
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 7.4e-143 511.1 369 66.4
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 3.7e-142 508.8 367 68.4
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 8.2e-142 507.7 366 67.8
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 1.1e-141 507.3 367 65.7
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 1.4e-141 506.9 371 67.4
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 3.1e-141 505.8 376 65.2
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 6.9e-141 504.6 360 66.1
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 6.9e-141 504.6 390 62.6
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 1.0e-139 500.7 371 65.5
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 2.9e-139 499.2 371 65.5
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 5.0e-139 498.4 456 55.5
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 6.5e-139 498.0 367 66.2
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 8.5e-139 497.7 370 66.2
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 1.1e-138 497.3 376 64.1
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 1.9e-138 496.5 341 70.4
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 2.5e-138 496.1 367 64.6
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 5.1e-136 488.4 393 61.6
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 4.4e-135 485.3 365 65.2
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 1.3e-134 483.8 366 63.7
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 6.3e-134 481.5 368 62.8
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 1.0e-131 474.2 381 62.2
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 1.4e-130 470.3 367 62.4
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 3.2e-130 469.2 363 63.4
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 9.4e-130 467.6 370 61.1
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 9.4e-130 467.6 376 61.4
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 3.9e-128 462.2 374 60.7
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 3.9e-128 462.2 374 60.7
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 1.8e-125 453.4 352 63.1
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 3.8e-123 445.7 383 56.7
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 5.0e-123 445.3 391 57.5
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 8.8e-120 434.5 363 58.7
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 1.5e-119 433.7 377 56.8
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 7.5e-119 431.4 291 71.1
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 2.2e-115 419.9 275 72.4
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 8.5e-115 417.9 369 55.8
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 4.2e-114 415.6 275 71.3
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 2.3e-112 409.8 361 56.2
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 5.4e-109 398.7 372 52.7
CiPaw.12G105000 Carya illinoinensis HOM05D004508 ORTHO05D005180 7.0e-109 398.3 396 54.3
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 1.2e-108 397.5 363 52.9
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 5.0e-107 392.1 592 40.4
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 3.6e-105 386.0 254 70.9
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 2.3e-104 383.3 248 71.0
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 2.0e-103 380.2 364 56.9
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 2.6e-103 379.8 266 65.8
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 8.3e-102 374.8 376 50.3
MELO3C013985.2 Cucumis melo HOM05D004508 ORTHO05D005180 1.5e-98 364.0 193 90.2
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 3.6e-97 359.4 359 48.7
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 1.4e-96 357.5 361 52.1
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 1.4e-96 357.5 246 66.7
PSO017G0573 Papaver somniferum HOM05D004508 ORTHO05D005180 3.4e-95 352.8 250 65.2
AUR62017391 Chenopodium quinoa HOM05D004508 ORTHO05D005180 9.8e-95 351.3 234 69.7
BcaC06g34438 Brassica carinata HOM05D004508 ORTHO05D005180 1.3e-94 350.9 247 64.8
BolC7t43385H Brassica oleracea HOM05D004508 ORTHO05D005180 1.7e-94 350.5 246 64.6
SMO230G0075 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 9.2e-93 344.7 361 47.6
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 5.0e-91 339.0 400 45.8
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 2.0e-87 327.0 360 48.1
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 2.1e-84 317.0 242 64.0
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 3.5e-84 316.2 256 61.7
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.1e-82 311.2 243 64.6
TPR.G214 Trifolium pratense HOM05D004508 ORTHO05D005180 2.4e-61 240.4 158 70.9
Gohir.A03G011900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 5.8e-55 219.2 272 48.5
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis HOM05D004508 ORTHO05D005180 2.4e-53 213.8 200 52.5
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 4.5e-47 193.0 241 46.9
MELO3C021762.2 Cucumis melo HOM05D004508 ORTHO05D005180 5.8e-47 192.6 115 80.0
vmacro17466 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 2.1e-44 184.1 127 68.5
Duzib084G0179 Durio zibethinus HOM05D004508 ORTHO05D005180 6.7e-43 179.1 153 56.9
MCO07G558 Micromonas commoda HOM05D004508 ORTHO05D005180 2.8e-41 173.7 410 33.2
VMungo1215G1224 Vigna mungo HOM05D004508 ORTHO05D005180 5.5e-37 159.5 115 67.8
CSS0024785 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 1.1e-34 151.8 97 69.1
PRCOL_00002067 Prasinoderma coloniale HOM05D004508 ORTHO05D005180 5.7e-34 149.4 370 31.4
Nn8g40647 Nelumbo nucifera HOM05D004508 ORTHO05D005180 2.8e-33 147.1 173 48.0
BolC6t40022H Brassica oleracea HOM05D004508 ORTHO05D005180 2.2e-25 120.9 99 57.6
Cre10.g459000 Chlamydomonas reinhardtii HOM05D004508 ORTHO05D005180 3.7e-25 120.2 294 29.9
BcaC06g35234 Brassica carinata HOM05D004508 ORTHO05D005180 2.5e-21 107.5 70 64.3
Cfa023844 Carpinus fangiana HOM05D004508 ORTHO05D005180 2.7e-20 104.0 296 29.7
BolC7t43387H Brassica oleracea HOM05D004508 ORTHO05D005180 1.3e-17 95.1 92 51.1
C03p35830 Brassica napus HOM05D004508 ORTHO05D005180 1.1e-16 92.0 92 48.9
C07p28470 Brassica napus HOM05D004508 ORTHO05D005180 1.2e-15 88.6 92 47.8
SGA_v2.0_scaffold120G32815 Striga asiatica HOM05D004508 ORTHO05D005180 2.6e-15 87.4 95 48.4
PRCOL_00001266 Prasinoderma coloniale HOM05D004508 ORTHO05D005180 8.0e-12 75.9 381 25.5
BolC3t15893H Brassica oleracea HOM05D004508 ORTHO05D005180 8.2e-09 65.9 48 54.2
BolC3t15892H Brassica oleracea HOM05D004508 ORTHO05D005180 2.4e-08 64.3 51 51.0
BcaC06g34436 Brassica carinata HOM05D004508 ORTHO05D005180 3.5e-07 60.5 54 48.1
MELO3C035473.2 Cucumis melo HOM05D040713 ORTHO05D005180 7.7e-07 59.3 44 68.2
CDE04G3100 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 1.0e-06 58.9 59 47.5
MELO3C030159.2 Cucumis melo HOM05D040713 ORTHO05D005180 8.5e-06 55.8 86 45.3


User provided reference genes

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