Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020009 Sechium edule HOM05D005633 ORTHO05D007003 0.0e+00 1627.1 796 100.0
ClCG01G023110 Citrullus lanatus HOM05D005633 ORTHO05D007003 0.0e+00 1249.6 765 81.6
CsaV3_6G050250 Cucumis sativus L. HOM05D005633 ORTHO05D007003 0.0e+00 1210.7 760 79.5
MELO3C007272.2 Cucumis melo HOM05D005633 ORTHO05D007003 0.0e+00 1092.8 706 78.2
QL05p041669 Quercus lobata HOM05D005633 ORTHO05D007003 2.6e-235 819.3 762 55.8
CiPaw.09G062100 Carya illinoinensis HOM05D005633 ORTHO05D007003 2.3e-228 796.2 756 54.9
Cfa000508 Carpinus fangiana HOM05D005633 ORTHO05D007003 1.7e-226 790.0 757 54.3
FvH4_3g08860 Fragaria vesca HOM05D005633 ORTHO05D007003 9.4e-222 774.2 758 54.5
FAN11G1234 Fragaria x ananassa HOM05D005633 ORTHO05D007003 1.2e-221 773.9 758 54.4
FAN25G1993 Fragaria x ananassa HOM05D005633 ORTHO05D007003 5.2e-220 768.5 758 54.5
FAN21G3099 Fragaria x ananassa HOM05D005633 ORTHO05D007003 6.7e-220 768.1 758 54.1
MD10G1291600 Malus domestica HOM05D005633 ORTHO05D007003 7.5e-219 764.6 769 53.8
Sabra04G0029300 Salix brachista HOM05D005633 ORTHO05D007003 7.7e-216 754.6 773 52.7
Atru.chr10.1839_Atru.chr10.1840 Acer truncatum HOM05D005633 ORTHO05D007003 1.0e-215 754.2 760 53.6
Manes.17G047800 Manihot esculenta HOM05D005633 ORTHO05D007003 1.5e-214 750.4 765 53.6
Potri.004G046900 Populus trichocarpa HOM05D005633 ORTHO05D007003 2.5e-214 749.6 740 54.3
Potri.011G056100 Populus trichocarpa HOM05D005633 ORTHO05D007003 1.6e-213 746.9 742 53.8
TAR629G0889 Trochodendron aralioides HOM05D005633 ORTHO05D007003 1.5e-211 740.3 766 52.3
Thecc.06G183700 Theobroma cacao HOM05D005633 ORTHO05D007003 2.0e-211 740.0 762 52.9
CANSAT35G1988 Cannabis sativa HOM05D005633 ORTHO05D007003 3.7e-210 735.7 759 51.8
Duzib235G0140 Durio zibethinus HOM05D005633 ORTHO05D007003 4.8e-210 735.3 764 52.6
arahy.Tifrunner.gnm1.ann1.QNV263 Arachis hypogaea HOM05D005633 ORTHO05D007003 2.0e-208 729.9 743 53.7
Gorai.010G155400 Gossypium raimondii HOM05D005633 ORTHO05D007003 1.7e-207 726.9 759 52.4
GSVIVG01021090001 Vitis vinifera HOM05D005633 ORTHO05D007003 1.7e-207 726.9 747 53.4
Gohir.A06G129500 Gossypium hirsutum HOM05D005633 ORTHO05D007003 2.5e-206 723.0 759 52.4
Atru.chr10.1822_Atru.chr10.1823 Acer truncatum HOM05D005633 ORTHO05D007003 1.6e-205 720.3 721 53.3
TPR.G16498 Trifolium pratense HOM05D005633 ORTHO05D007003 2.8e-205 719.5 740 52.6
Glyma.13G237200 Glycine max HOM05D005633 ORTHO05D007003 6.1e-205 718.4 747 52.2
Ca_00349_v3 Cicer arietinum L. HOM05D005633 ORTHO05D007003 1.0e-204 717.6 749 51.3
Phvul.006G183800 Phaseolus vulgaris HOM05D005633 ORTHO05D007003 8.9e-204 714.5 740 53.1
TWI63G0225 Tripterygium wilfordii HOM05D005633 ORTHO05D007003 3.4e-203 712.6 765 51.0
Sabra11G0038100 Salix brachista HOM05D005633 ORTHO05D007003 1.3e-202 710.7 783 50.7
Medtr2g014210 Medicago truncatula HOM05D005633 ORTHO05D007003 6.3e-202 708.4 752 51.7
Gohir.D06G133500 Gossypium hirsutum HOM05D005633 ORTHO05D007003 8.3e-202 708.0 739 52.0
Psat1g203720 Pisum sativum HOM05D005633 ORTHO05D007003 1.1e-201 707.6 746 51.9
arahy.Tifrunner.gnm1.ann1.U0Q0B6 Arachis hypogaea HOM05D005633 ORTHO05D007003 4.5e-200 702.2 768 51.4
Lj6g0019345 Lotus japonicus HOM05D005633 ORTHO05D007003 7.8e-200 701.4 763 50.7
Lalb_Chr18g0059461 Lupinus albus HOM05D005633 ORTHO05D007003 7.8e-200 701.4 760 51.2
COL.COLO4_31438 Corchorus olitorius HOM05D005633 ORTHO05D007003 1.2e-197 694.1 812 47.7
Rhsim02G0132600 Rhododendron simsii HOM05D005633 ORTHO05D007003 1.2e-197 694.1 744 50.0
FAN16G2481 Fragaria x ananassa HOM05D005633 ORTHO05D007003 4.7e-197 692.2 757 50.6
Hma1.2p1_0208F.1_g088350 Hydrangea macrophylla HOM05D005633 ORTHO05D007003 1.3e-194 684.1 763 50.7
Lj2C290G9 Lonicera japonica HOM05D005633 ORTHO05D007003 2.4e-193 679.9 766 49.9
PGR042G0490 Punica granatum HOM05D005633 ORTHO05D007003 1.1e-190 671.0 760 48.8
DCAR_004057 Daucus carota HOM05D005633 ORTHO05D007003 1.9e-190 670.2 763 48.1
Nn1g04161 Nelumbo nucifera HOM05D005633 ORTHO05D007003 7.3e-190 668.3 759 48.9
Sopen02g022750 Solanum pennellii HOM05D005633 ORTHO05D007003 7.3e-190 668.3 764 47.5
Solyc02g077900.4 Solanum lycopersicum HOM05D005633 ORTHO05D007003 1.6e-189 667.2 764 47.4
Cc02_g13630 Coffea canephora HOM05D005633 ORTHO05D007003 2.8e-189 666.4 752 48.3
CAN.G529.25 Capsicum annuum HOM05D005633 ORTHO05D007003 6.8e-188 661.8 764 47.1
Nitab4.5_0016285g0010 Nicotiana tabacum HOM05D005633 ORTHO05D007003 2.0e-187 660.2 762 47.1
THA.LOC104820553 Tarenaya hassleriana HOM05D005633 ORTHO05D007003 2.9e-186 656.4 745 49.3
Sp1g24540 Schrenkiella parvula HOM05D005633 ORTHO05D007003 3.7e-186 656.0 743 47.9
Migut.M01122 Erythranthe guttata HOM05D005633 ORTHO05D007003 1.9e-185 653.7 737 47.5
PSO675G0497 Papaver somniferum HOM05D005633 ORTHO05D007003 5.4e-185 652.1 753 48.6
PGSC0003DMG400029731 Solanum tuberosum HOM05D005633 ORTHO05D007003 7.0e-185 651.7 773 46.1
AT1G28320 Arabidopsis thaliana HOM05D005633 ORTHO05D007003 7.8e-184 648.3 741 47.4
CARHR027810 Cardamine hirsuta HOM05D005633 ORTHO05D007003 1.0e-183 647.9 737 47.5
Dinv17333 Davidia involucrata HOM05D005633 ORTHO05D007003 6.6e-183 645.2 743 49.8
Thhalv10006942m.g Eutrema salsugineum HOM05D005633 ORTHO05D007003 8.6e-183 644.8 750 46.7
Oeu029366.1 Olea europaea HOM05D005633 ORTHO05D007003 1.9e-182 643.7 740 48.0
SalBow8G0351 Salvia bowleyana HOM05D005633 ORTHO05D007003 1.9e-182 643.7 762 47.0
AL1G41900 Arabidopsis lyrata HOM05D005633 ORTHO05D007003 2.5e-182 643.3 741 47.4
Carub.0001s2677 Capsella rubella HOM05D005633 ORTHO05D007003 3.6e-181 639.4 740 46.8
Aqoxy1G02351 Aquilegia oxysepala HOM05D005633 ORTHO05D007003 1.4e-180 637.5 749 49.4
VMungo0540G1564 Vigna mungo HOM05D005633 ORTHO05D007003 1.8e-180 637.1 739 49.3
Sc05g0007520 Simmondsia chinensis HOM05D005633 ORTHO05D007003 9.9e-179 631.3 743 46.4
ECA248G0126 Erigeron canadensis HOM05D005633 ORTHO05D007003 3.7e-178 629.4 732 46.9
A09p37740 Brassica napus HOM05D005633 ORTHO05D007003 1.1e-177 627.9 739 47.9
BraA09t39286Z Brassica rapa HOM05D005633 ORTHO05D007003 1.1e-177 627.9 739 48.0
Aa31sc86G40 Aethionema arabicum HOM05D005633 ORTHO05D007003 3.5e-176 622.9 770 46.6
Hund21211 Selenicereus undatus HOM05D005633 ORTHO05D007003 1.0e-175 621.3 793 45.1
Ciclev10014582m.g Citrus clementina HOM05D005633 ORTHO05D007003 1.5e-174 617.5 646 52.0
EL10Ac8g20419 Beta vulgaris HOM05D005633 ORTHO05D007003 1.2e-173 614.4 766 46.2
ATR0752G234 Amborella trichopoda HOM05D005633 ORTHO05D007003 2.8e-173 613.2 756 46.8
C05p27200 Brassica napus HOM05D005633 ORTHO05D007003 3.6e-173 612.8 743 46.8
BolC5t31434H Brassica oleracea HOM05D005633 ORTHO05D007003 2.4e-172 610.1 760 45.9
Ah.14g089640 Amaranthus hybridus HOM05D005633 ORTHO05D007003 1.2e-171 607.8 739 45.7
Actinidia26133 Actinidia chinensis HOM05D005633 ORTHO05D007003 4.9e-170 602.4 637 50.2
Lsat_1_v5_gn_1_124421 Lactuca sativa HOM05D005633 ORTHO05D007003 1.7e-167 594.0 755 44.6
HanXRQChr01g0004651 Helianthus annuus HOM05D005633 ORTHO05D007003 1.5e-166 590.9 741 46.0
Nitab4.5_0002219g0050 Nicotiana tabacum HOM05D005633 ORTHO05D007003 2.4e-164 583.6 759 43.6
Haze_06405 Corylus avellana HOM05D005633 ORTHO05D007003 4.0e-164 582.8 573 52.4
Peaxi162Scf01100g00118 Petunia axillaris HOM05D005633 ORTHO05D007003 2.0e-163 580.5 751 43.7
Prupe.4G050600 Prunus persica HOM05D005633 ORTHO05D007003 4.2e-161 572.8 574 52.1
AUR62014850 Chenopodium quinoa HOM05D005633 ORTHO05D007003 3.5e-160 569.7 763 44.6
Actinidia07591 Actinidia chinensis HOM05D005633 ORTHO05D007003 2.3e-159 567.0 769 43.8
SGA_v2.0_scaffold100G29699 Striga asiatica HOM05D005633 ORTHO05D007003 2.8e-157 560.1 740 43.4
SEGI_06204 Sequoiadendron giganteum HOM05D005633 ORTHO05D007003 6.9e-156 555.4 772 43.1
vmacro15920 Vaccinium macrocarpon HOM05D005633 ORTHO05D007003 3.8e-154 549.7 526 54.2
AUR62017045 Chenopodium quinoa HOM05D005633 ORTHO05D007003 1.3e-143 514.6 763 41.7
Eucgr.E03258 Eucalyptus grandis HOM05D005633 ORTHO05D007003 2.8e-141 506.9 581 48.0
Cpa.g.sc373.8 Carica papaya HOM05D005633 ORTHO05D007003 5.3e-140 502.7 482 55.8
Pp3c24_9210 Physcomitrium patens HOM05D005633 ORTHO05D007003 1.2e-131 474.9 793 39.2
Mapoly0045s0140 Marchantia polymorpha HOM05D005633 ORTHO05D007003 1.0e-130 471.9 838 38.4
Zm00001eb291760 Zea mays HOM05D005633 ORTHO05D007003 1.3e-130 471.5 751 38.1
Os05g0497700 Oryza sativa ssp. japonica HOM05D005633 ORTHO05D007003 2.2e-125 454.1 735 38.9
AagrBONN_evm.TU.Sc2ySwM_228.2766 Anthoceros agrestis HOM05D005633 ORTHO05D007003 1.9e-121 441.0 829 37.0
Glyma.15G076300 Glycine max HOM05D005633 ORTHO05D007003 1.7e-114 417.9 747 37.8
RcHm_v2.0_Chr5g0008891 Rosa chinensis HOM05D005633 ORTHO05D007003 3.6e-112 410.2 370 57.8
Hma1.2p1_0208F.1_g088340 Hydrangea macrophylla HOM05D005633 ORTHO05D007003 1.8e-111 407.9 466 49.8
Thhalv10007180m.g Eutrema salsugineum HOM05D005633 ORTHO05D007003 5.2e-111 406.4 745 35.4
unitig_27.g24969 Utricularia gibba HOM05D005633 ORTHO05D007003 2.2e-101 374.4 663 34.7
RcHm_v2.0_Chr5g0008901 Rosa chinensis HOM05D005633 ORTHO05D007003 1.8e-95 354.8 324 57.7
BcaB07g32447 Brassica carinata HOM05D005633 ORTHO05D007003 3.1e-92 344.0 348 53.4
MBI02_g35620_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 5.6e-81 306.6 462 40.5
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 3.0e-74 284.3 421 41.1
BcaB07g32448 Brassica carinata HOM05D005633 ORTHO05D007003 1.2e-67 262.3 330 43.3
HPP92_025315 Vanilla planifolia HOM05D005633 ORTHO05D007003 5.1e-66 256.9 450 35.1
CBR_g49783 Chara braunii HOM05D005633 ORTHO05D001702 1.5e-57 228.8 585 31.1
Haze_06406 Corylus avellana HOM05D005633 ORTHO05D007003 5.6e-57 226.9 186 64.0
HPP92_025316 Vanilla planifolia HOM05D005633 ORTHO05D007003 8.1e-56 223.0 232 52.2
Cpa.g.sc373.5 Carica papaya HOM05D005633 ORTHO05D007003 1.8e-47 195.3 186 52.7
MBI02_g35622_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 2.6e-38 164.9 248 45.6
MBI02_g35619_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 1.9e-36 158.7 218 43.6
vmacro15921 Vaccinium macrocarpon HOM05D005633 ORTHO05D007003 6.2e-32 143.7 143 51.0
CDE11G0408 Ceratophyllum demersum HOM05D005633 ORTHO05D007003 9.0e-31 139.8 269 35.3
Actinidia39471 Actinidia chinensis HOM05D005633 ORTHO05D007003 1.0e-26 126.3 402 31.1
MCO12G111 Micromonas commoda HOM05D005633 ORTHO05D007003 1.0e-26 126.3 520 26.7
MBI02_g19360_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 7.6e-22 110.2 208 34.6
MD05G1312100 Malus domestica HOM05D005633 ORTHO05D007003 1.4e-20 105.9 59 83.1
MapolyY_B0048 Marchantia polymorpha HOM05D005633 ORTHO05D007003 8.7e-18 96.7 117 42.7
CDE05G1605 Ceratophyllum demersum HOM05D005633 ORTHO05D007003 1.0e-13 83.2 82 54.9
Cre12.g548200 Chlamydomonas reinhardtii HOM05D005633 ORTHO05D007003 3.8e-13 81.3 110 38.2
MBI02_g35618_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 2.5e-12 78.6 81 49.4
CBR_g49781 Chara braunii HOM05D005633 ORTHO05D007003 2.1e-11 75.5 322 26.4
MBI02_g19359_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 2.5e-09 68.6 55 54.5
Sabra05G0135200 Salix brachista HOM05D005633 ORTHO05D007003 5.7e-09 67.4 114 36.0
BolC3t19753H Brassica oleracea HOM05D005633 ORTHO05D007003 4.1e-07 61.2 43 53.5
MBI02_g19356_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 2.0e-06 58.9 80 46.2
MBI02_g32442_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 4.5e-06 57.8 80 46.2


User provided reference genes

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