Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019988 Sechium edule HOM05D002878 ORTHO05D003649 1.2e-163 579.7 291 100.0
Sed0027368 Sechium edule HOM05D002878 ORTHO05D003649 1.1e-146 523.5 291 90.4
Sed0023782 Sechium edule HOM05D002878 ORTHO05D003649 1.9e-135 486.1 291 84.2
CsaV3_2G016630 Cucumis sativus L. HOM05D002878 ORTHO05D003649 4.6e-134 481.5 291 82.8
ClCG02G012500 Citrullus lanatus HOM05D002878 ORTHO05D003649 3.9e-133 478.4 291 82.8
Cfa004025 Carpinus fangiana HOM05D002878 ORTHO05D003649 3.9e-109 398.7 278 70.1
Sabra05G0112100 Salix brachista HOM05D002878 ORTHO05D003649 6.7e-109 397.9 288 68.1
Manes.13G124100 Manihot esculenta HOM05D002878 ORTHO05D003649 3.3e-108 395.6 279 71.0
CANSAT01G1312 Cannabis sativa HOM05D002878 ORTHO05D003649 7.4e-108 394.4 286 68.5
CiPaw.01G017900 Carya illinoinensis HOM05D002878 ORTHO05D003649 1.3e-107 393.7 278 70.1
Sabra07G0039100 Salix brachista HOM05D002878 ORTHO05D003649 1.3e-107 393.7 277 69.7
Eucgr.I00922 Eucalyptus grandis HOM05D002878 ORTHO05D003649 2.2e-107 392.9 280 67.9
Potri.005G138400 Populus trichocarpa HOM05D002878 ORTHO05D003649 2.8e-107 392.5 288 67.0
Potri.007G044300 Populus trichocarpa HOM05D002878 ORTHO05D003649 2.8e-107 392.5 287 67.6
Thhalv10003769m.g Eutrema salsugineum HOM05D002878 ORTHO05D003649 8.2e-107 391.0 289 65.1
QL06p041333 Quercus lobata HOM05D002878 ORTHO05D003649 5.3e-106 388.3 278 69.1
TAR376G0016 Trochodendron aralioides HOM05D002878 ORTHO05D003649 5.3e-106 388.3 278 68.7
Aa31LG1G15560 Aethionema arabicum HOM05D002878 ORTHO05D003649 6.9e-106 387.9 289 64.7
CARHR280630 Cardamine hirsuta HOM05D002878 ORTHO05D003649 2.0e-105 386.3 289 64.4
GSVIVG01022128001 Vitis vinifera HOM05D002878 ORTHO05D003649 2.0e-105 386.3 288 67.4
Duzib187G0827 Durio zibethinus HOM05D002878 ORTHO05D003649 3.4e-105 385.6 277 69.3
Nn5g30293 Nelumbo nucifera HOM05D002878 ORTHO05D003649 7.7e-105 384.4 291 64.9
MSTRG.23744 Avicennia marina HOM05D002878 ORTHO05D003649 1.7e-104 383.3 276 67.0
PGR004G0880 Punica granatum HOM05D002878 ORTHO05D003649 1.7e-104 383.3 279 67.7
COL.COLO4_11419 Corchorus olitorius HOM05D002878 ORTHO05D003649 2.2e-104 382.9 278 69.1
BcaC06g34781 Brassica carinata HOM05D002878 ORTHO05D003649 2.9e-104 382.5 278 65.5
A07p16900 Brassica napus HOM05D002878 ORTHO05D003649 2.9e-104 382.5 278 65.1
C07p24710 Brassica napus HOM05D002878 ORTHO05D003649 2.9e-104 382.5 278 65.5
BolC7t42992H Brassica oleracea HOM05D002878 ORTHO05D003649 2.9e-104 382.5 278 65.5
BraA07t29416Z Brassica rapa HOM05D002878 ORTHO05D003649 2.9e-104 382.5 278 65.1
BcaB02g09963 Brassica carinata HOM05D002878 ORTHO05D003649 5.0e-104 381.7 278 65.5
Glyma.11G055700 Glycine max HOM05D002878 ORTHO05D003649 5.0e-104 381.7 285 67.4
Carub.0008s2747 Capsella rubella HOM05D002878 ORTHO05D003649 6.5e-104 381.3 289 65.1
Prupe.7G133100 Prunus persica HOM05D002878 ORTHO05D003649 1.1e-103 380.6 278 68.0
Rhsim10G0117200 Rhododendron simsii HOM05D002878 ORTHO05D003649 1.1e-103 380.6 276 67.8
arahy.Tifrunner.gnm1.ann1.H1IQ00 Arachis hypogaea HOM05D002878 ORTHO05D003649 1.4e-103 380.2 287 66.6
CSS0031288 Camellia sinensis var. sinensis HOM05D002878 ORTHO05D003649 1.4e-103 380.2 289 65.7
AL8G44330 Arabidopsis lyrata HOM05D002878 ORTHO05D003649 3.2e-103 379.0 289 63.3
Thecc.01G056500 Theobroma cacao HOM05D002878 ORTHO05D003649 3.2e-103 379.0 277 69.0
AUR62001926 Chenopodium quinoa HOM05D002878 ORTHO05D003649 4.2e-103 378.6 285 64.2
arahy.Tifrunner.gnm1.ann1.5ITW1B Arachis hypogaea HOM05D002878 ORTHO05D003649 9.4e-103 377.5 287 66.2
Cpa.g.sc55.146 Carica papaya HOM05D002878 ORTHO05D003649 9.4e-103 377.5 285 65.6
vmacro05340 Vaccinium macrocarpon HOM05D002878 ORTHO05D003649 1.2e-102 377.1 286 66.1
AT5G67030 Arabidopsis thaliana HOM05D002878 ORTHO05D003649 2.1e-102 376.3 289 61.9
MBI03_g13473_MAGBIO Magnolia biondii HOM05D002878 ORTHO05D003649 2.1e-102 376.3 281 67.3
Hma1.2p1_0017F.1_g011360 Hydrangea macrophylla HOM05D002878 ORTHO05D003649 3.6e-102 375.6 287 65.9
Actinidia16481 Actinidia chinensis HOM05D002878 ORTHO05D003649 4.7e-102 375.2 289 65.4
HanXRQChr12g0378831 Helianthus annuus HOM05D002878 ORTHO05D003649 4.7e-102 375.2 276 65.6
PSO170G1040 Papaver somniferum HOM05D002878 ORTHO05D003649 4.7e-102 375.2 276 66.7
Atru.chr3.325 Acer truncatum HOM05D002878 ORTHO05D003649 7.9e-102 374.4 278 66.5
Sp2g29640 Schrenkiella parvula HOM05D002878 ORTHO05D003649 1.0e-101 374.0 289 62.6
TWI09G0920 Tripterygium wilfordii HOM05D002878 ORTHO05D003649 2.3e-101 372.9 287 64.1
Hund16322 Selenicereus undatus HOM05D002878 ORTHO05D003649 3.0e-101 372.5 278 65.1
Gohir.A11G192600 Gossypium hirsutum HOM05D002878 ORTHO05D003649 3.9e-101 372.1 277 67.9
Lalb_Chr00c02g0404101 Lupinus albus HOM05D002878 ORTHO05D003649 3.9e-101 372.1 278 66.9
EL10Ac6g15742 Beta vulgaris HOM05D002878 ORTHO05D003649 5.1e-101 371.7 278 65.1
AUR62003884 Chenopodium quinoa HOM05D002878 ORTHO05D003649 5.1e-101 371.7 285 63.9
Dinv39846 Davidia involucrata HOM05D002878 ORTHO05D003649 8.8e-101 370.9 288 64.9
PSO210G3686 Papaver somniferum HOM05D002878 ORTHO05D003649 1.5e-100 370.2 286 64.0
BcaC04g23187 Brassica carinata HOM05D002878 ORTHO05D003649 2.6e-100 369.4 278 63.7
ECA246G0578 Erigeron canadensis HOM05D002878 ORTHO05D003649 2.6e-100 369.4 277 65.0
Lj2g0007356 Lotus japonicus HOM05D002878 ORTHO05D003649 2.6e-100 369.4 285 65.6
MD02G1172400 Malus domestica HOM05D002878 ORTHO05D003649 3.3e-100 369.0 278 66.2
Gohir.D11G199300 Gossypium hirsutum HOM05D002878 ORTHO05D003649 4.4e-100 368.6 277 67.1
THA.LOC104819235 Tarenaya hassleriana HOM05D002878 ORTHO05D003649 7.4e-100 367.9 283 64.0
Gorai.007G213500 Gossypium raimondii HOM05D002878 ORTHO05D003649 9.7e-100 367.5 277 67.1
VMungo1215G2613 Vigna mungo HOM05D002878 ORTHO05D003649 1.3e-99 367.1 285 66.3
Solyc02g090890.4 Solanum lycopersicum HOM05D002878 ORTHO05D003649 1.7e-99 366.7 287 64.5
VMungo0251G0371 Vigna mungo HOM05D002878 ORTHO05D003649 3.7e-99 365.5 277 65.7
BolC9t54020H Brassica oleracea HOM05D002878 ORTHO05D003649 4.8e-99 365.2 290 61.0
BraA09t36606Z Brassica rapa HOM05D002878 ORTHO05D003649 4.8e-99 365.2 289 61.6
Phvul.003G243800 Phaseolus vulgaris HOM05D002878 ORTHO05D003649 4.8e-99 365.2 286 64.3
Sopen02g035540 Solanum pennellii HOM05D002878 ORTHO05D003649 6.3e-99 364.8 287 64.5
PGSC0003DMG400004020 Solanum tuberosum HOM05D002878 ORTHO05D003649 8.2e-99 364.4 287 64.5
TAR628G1519 Trochodendron aralioides HOM05D002878 ORTHO05D003649 1.1e-98 364.0 278 66.2
A09p09580 Brassica napus HOM05D002878 ORTHO05D003649 1.4e-98 363.6 289 61.2
Ciclev10025089m.g Citrus clementina HOM05D002878 ORTHO05D003649 1.4e-98 363.6 288 65.6
Nitab4.5_0002016g0120 Nicotiana tabacum HOM05D002878 ORTHO05D003649 1.4e-98 363.6 287 63.1
HPP92_010971 Vanilla planifolia HOM05D002878 ORTHO05D003649 1.4e-98 363.6 279 64.5
Migut.H00431 Erythranthe guttata HOM05D002878 ORTHO05D003649 2.4e-98 362.8 276 63.8
Lj4C149T12 Lonicera japonica HOM05D002878 ORTHO05D003649 3.1e-98 362.5 267 65.5
Lj4g0006017 Lotus japonicus HOM05D002878 ORTHO05D003649 5.3e-98 361.7 289 63.7
Nitab4.5_0002440g0040 Nicotiana tabacum HOM05D002878 ORTHO05D003649 5.3e-98 361.7 304 60.5
Ca_22162_v3 Cicer arietinum L. HOM05D002878 ORTHO05D003649 7.0e-98 361.3 278 64.4
Ca_24768_v3 Cicer arietinum L. HOM05D002878 ORTHO05D003649 7.0e-98 361.3 279 66.3
MD15G1284500 Malus domestica HOM05D002878 ORTHO05D003649 9.1e-98 360.9 279 66.3
BcaC04g23185 Brassica carinata HOM05D002878 ORTHO05D003649 1.2e-97 360.5 289 60.6
C09p11330 Brassica napus HOM05D002878 ORTHO05D003649 2.6e-97 359.4 289 60.6
Aqoxy5G01226 Aquilegia oxysepala HOM05D002878 ORTHO05D003649 3.5e-97 359.0 282 63.8
Duzib147G1525 Durio zibethinus HOM05D002878 ORTHO05D003649 7.7e-97 357.8 289 64.7
Peaxi162Scf00450g00316 Petunia axillaris HOM05D002878 ORTHO05D003649 7.7e-97 357.8 293 62.5
CAN.G660.9 Capsicum annuum HOM05D002878 ORTHO05D003649 1.0e-96 357.5 287 62.0
Glyma.17G174500 Glycine max HOM05D002878 ORTHO05D003649 1.7e-96 356.7 277 63.9
arahy.Tifrunner.gnm1.ann1.A5JFP2 Arachis hypogaea HOM05D002878 ORTHO05D003649 2.2e-96 356.3 278 64.4
FvH4_1g16080 Fragaria vesca HOM05D002878 ORTHO05D003649 2.2e-96 356.3 278 64.4
FAN19G0778 Fragaria x ananassa HOM05D002878 ORTHO05D003649 2.2e-96 356.3 278 64.4
FAN23G1030 Fragaria x ananassa HOM05D002878 ORTHO05D003649 2.2e-96 356.3 278 64.4
FAN28G1157 Fragaria x ananassa HOM05D002878 ORTHO05D003649 2.2e-96 356.3 278 64.4
RcHm_v2.0_Chr2g0105701 Rosa chinensis HOM05D002878 ORTHO05D003649 2.2e-96 356.3 278 64.4
Os04g0448900 Oryza sativa ssp. japonica HOM05D002878 ORTHO05D003649 2.9e-96 355.9 275 64.4
BcaB04g20078 Brassica carinata HOM05D002878 ORTHO05D003649 6.5e-96 354.8 278 62.2
DCAR_025735 Daucus carota HOM05D002878 ORTHO05D003649 1.1e-95 354.0 276 62.7
arahy.Tifrunner.gnm1.ann1.MHSG3V Arachis hypogaea HOM05D002878 ORTHO05D003649 1.4e-95 353.6 278 64.0
Phvul.002G018700 Phaseolus vulgaris HOM05D002878 ORTHO05D003649 2.5e-95 352.8 285 64.2
SalBow1G5413 Salvia bowleyana HOM05D002878 ORTHO05D003649 2.5e-95 352.8 314 58.9
BcaC04g23188 Brassica carinata HOM05D002878 ORTHO05D003649 3.2e-95 352.4 267 62.9
Lsat_1_v5_gn_3_90761 Lactuca sativa HOM05D002878 ORTHO05D003649 5.5e-95 351.7 284 59.9
Zm00001eb423570 Zea mays HOM05D002878 ORTHO05D003649 5.5e-95 351.7 279 61.6
Lalb_Chr16g0378561 Lupinus albus HOM05D002878 ORTHO05D003649 1.2e-94 350.5 278 62.9
Psat2g167360 Pisum sativum HOM05D002878 ORTHO05D003649 1.8e-93 346.7 281 64.1
TPR.G19064 Trifolium pratense HOM05D002878 ORTHO05D003649 3.0e-93 345.9 288 60.4
SalBow5G1901 Salvia bowleyana HOM05D002878 ORTHO05D003649 6.7e-93 344.7 277 61.4
Cc07_g06010 Coffea canephora HOM05D002878 ORTHO05D003649 2.8e-91 339.3 266 63.9
Eucgr.I00923 Eucalyptus grandis HOM05D002878 ORTHO05D003649 4.5e-89 332.0 277 61.4
CDE10G0029 Ceratophyllum demersum HOM05D002878 ORTHO05D003649 4.2e-87 325.5 282 58.9
Medtr5g017350 Medicago truncatula HOM05D002878 ORTHO05D003649 4.2e-87 325.5 319 55.2
MELO3C020872.2 Cucumis melo HOM05D002878 ORTHO05D003649 1.2e-84 317.4 184 84.8
SEGI_14380 Sequoiadendron giganteum HOM05D002878 ORTHO05D003649 1.7e-83 313.5 285 56.1
Oeu031955.2 Olea europaea HOM05D002878 ORTHO05D003649 2.4e-82 309.7 283 58.3
FAN26G1304 Fragaria x ananassa HOM05D002878 ORTHO05D003649 1.7e-75 287.0 303 54.1
Ah.03g145010 Amaranthus hybridus HOM05D002878 ORTHO05D003649 1.1e-74 284.3 231 60.6
Mapoly0028s0084 Marchantia polymorpha HOM05D002878 ORTHO05D003649 7.0e-74 281.6 282 53.2
Psat0s1281g0080 Pisum sativum HOM05D002878 ORTHO05D003649 3.5e-73 279.3 201 69.2
SMO134G0128 Selaginella moellendorffii HOM05D002878 ORTHO05D003649 5.9e-73 278.5 285 50.5
ATR1126G066 Amborella trichopoda HOM05D002878 ORTHO05D003649 1.7e-72 276.9 203 65.0
Ciclev10027323m.g Citrus clementina HOM05D002878 ORTHO05D003649 2.3e-72 276.6 293 54.6
Pp3c12_10330 Physcomitrium patens HOM05D002878 ORTHO05D003649 1.9e-71 273.5 285 49.8
Pp3c4_13840 Physcomitrium patens HOM05D002878 ORTHO05D003649 1.6e-70 270.4 284 50.4
unitig_27.g25327 Utricularia gibba HOM05D002878 ORTHO05D003649 1.4e-66 257.3 179 67.0
Zm00001eb081460 Zea mays HOM05D002878 ORTHO05D003649 1.4e-66 257.3 213 61.5
MSTRG.2882 Avicennia marina HOM05D002878 ORTHO05D003649 1.2e-60 237.7 160 70.6
SGA_v2.0_scaffold15G07306 Striga asiatica HOM05D002878 ORTHO05D003649 1.3e-56 224.2 276 46.0
Sc07g0000780 Simmondsia chinensis HOM05D002878 ORTHO05D003649 3.4e-52 209.5 133 75.9
Migut.K00767 Erythranthe guttata HOM05D002878 ORTHO05D003649 1.3e-51 207.6 152 66.4
Haze_15395 Corylus avellana HOM05D002878 ORTHO05D003649 3.6e-46 189.5 117 76.9
Haze_15396 Corylus avellana HOM05D002878 ORTHO05D003649 3.4e-44 183.0 147 61.9
arahy.Tifrunner.gnm1.ann1.43A3FA Arachis hypogaea HOM05D002878 ORTHO05D003649 4.0e-37 159.5 148 55.4
Cre02.g082550 Chlamydomonas reinhardtii HOM05D002878 ORTHO05D003649 9.6e-31 138.3 343 29.2
MBI01_g33890_MAGBIO Magnolia biondii HOM05D002878 ORTHO05D003649 4.2e-26 122.9 117 52.1
PSO384G3105 Papaver somniferum HOM05D002878 ORTHO05D003649 4.0e-21 106.3 114 50.9
Rhsim07G0050700 Rhododendron simsii HOM05D001227 ORTHO05D001082 4.5e-20 102.8 117 42.7
TAR633G2681 Trochodendron aralioides HOM05D002878 ORTHO05D003649 4.5e-20 102.8 117 44.4
GSVIVG01001372001 Vitis vinifera HOM05D002878 ORTHO05D003649 2.4e-18 97.1 121 43.0
Actinidia31701 Actinidia chinensis HOM05D002878 ORTHO05D003649 5.4e-18 95.9 117 41.9
CSS0041624 Camellia sinensis var. sinensis HOM05D002878 ORTHO05D003649 5.4e-18 95.9 121 41.3
TPR.G30693 Trifolium pratense HOM05D002878 ORTHO05D003649 1.2e-17 94.7 86 55.8
QL04p000093 Quercus lobata HOM05D002878 ORTHO05D003649 1.8e-16 90.9 117 39.3
QL04p003128 Quercus lobata HOM05D002878 ORTHO05D003649 1.8e-16 90.9 117 39.3
Dinv43928 Davidia involucrata HOM05D002878 ORTHO05D003649 3.9e-16 89.7 114 40.4
vmacro13619 Vaccinium macrocarpon HOM05D002878 ORTHO05D003649 1.9e-15 87.4 122 39.3
ATR0605G380 Amborella trichopoda HOM05D002878 ORTHO05D003649 4.3e-15 86.3 117 40.2
arahy.Tifrunner.gnm1.ann1.6G54S4 Arachis hypogaea HOM05D002878 ORTHO05D003649 4.3e-15 86.3 66 62.1
Lalb_Chr01g0008141 Lupinus albus HOM05D002878 ORTHO05D003649 1.3e-14 84.7 117 39.3
Potri.001G229100 Populus trichocarpa HOM05D002878 ORTHO05D003649 2.1e-14 84.0 117 35.9
Glyma.09G000600 Glycine max HOM05D002878 ORTHO05D003649 9.0e-13 78.6 117 38.5
Medtr4g022850 Medicago truncatula HOM05D002878 ORTHO05D003649 1.5e-12 77.8 118 39.0
Lj9A623T47 Lonicera japonica HOM05D002878 ORTHO05D003649 3.4e-12 76.6 85 48.2
Lj3g0027459 Lotus japonicus HOM05D002878 ORTHO05D003649 3.4e-12 76.6 118 35.6
DCAR_015695 Daucus carota HOM05D002878 ORTHO05D003649 5.8e-12 75.9 118 39.0
HanXRQChr04g0117341 Helianthus annuus HOM05D002878 ORTHO05D003649 7.6e-12 75.5 134 37.3
PRCOL_00000700 Prasinoderma coloniale HOM05D002878 ORTHO05D003649 7.6e-12 75.5 124 41.9
Manes.10G150700 Manihot esculenta HOM05D002878 ORTHO05D003649 1.0e-11 75.1 85 49.4
RcHm_v2.0_Chr5g0062961 Rosa chinensis HOM05D002878 ORTHO05D003649 1.0e-11 75.1 44 77.3
arahy.Tifrunner.gnm1.ann1.7TC4IV Arachis hypogaea HOM05D002878 ORTHO05D003649 1.7e-11 74.3 123 38.2
MD07G1003000 Malus domestica HOM05D002878 ORTHO05D003649 1.7e-11 74.3 117 33.3
VMungo1127G0209 Vigna mungo HOM05D002878 ORTHO05D003649 2.2e-11 73.9 118 36.4
TPR.G30697 Trifolium pratense HOM05D002878 ORTHO05D003649 2.9e-11 73.6 44 79.5
Phvul.011G214600 Phaseolus vulgaris HOM05D002878 ORTHO05D003649 8.4e-11 72.0 118 36.4
Sabra16G0136700 Salix brachista HOM05D002878 ORTHO05D003649 8.4e-11 72.0 83 44.6
Prupe.2G004400 Prunus persica HOM05D002878 ORTHO05D003649 1.4e-10 71.2 124 31.5
Lsat_1_v5_gn_9_111181 Lactuca sativa HOM05D002878 ORTHO05D003649 7.1e-10 68.9 122 32.8
Migut.B01365 Erythranthe guttata HOM05D002878 ORTHO05D003649 1.2e-09 68.2 119 32.8
ECA236G1248 Erigeron canadensis HOM05D002878 ORTHO05D003649 6.0e-09 65.9 117 33.3
MD02G1318300 Malus domestica HOM05D002878 ORTHO05D003649 1.0e-08 65.1 153 28.1
Migut.B01363 Erythranthe guttata HOM05D002878 ORTHO05D003649 1.8e-08 64.3 119 33.6
MCO16G227 Micromonas commoda HOM05D002878 ORTHO05D003649 5.1e-08 62.8 127 36.2
Atru.chr11.2692 Acer truncatum HOM05D002878 ORTHO05D003649 2.5e-07 60.5 55 60.0
Os11g0127800 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 2.8e-06 57.0 150 29.3


User provided reference genes

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