Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 1.2e-40 169.5 88 100.0
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 5.8e-32 140.6 88 84.1
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 7.1e-30 133.7 88 75.0
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 7.1e-30 133.7 88 77.3
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 1.6e-29 132.5 88 72.7
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 1.6e-29 132.5 88 77.3
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 4.6e-29 131.0 88 76.1
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 6.0e-29 130.6 88 72.7
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 6.0e-29 130.6 88 75.0
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 7.9e-29 130.2 85 72.9
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 1.0e-28 129.8 88 75.0
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 3.0e-28 128.3 88 73.9
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 5.1e-28 127.5 88 71.6
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 5.1e-28 127.5 89 71.9
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 5.1e-28 127.5 88 70.5
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 1.5e-27 125.9 117 63.2
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 1.5e-27 125.9 88 68.2
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 1.5e-27 125.9 85 71.8
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 1.9e-27 125.6 88 69.3
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 4.3e-27 124.4 88 71.6
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 5.6e-27 124.0 88 65.9
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 9.6e-27 123.2 88 69.3
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 9.6e-27 123.2 88 71.6
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 9.6e-27 123.2 88 71.6
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 8.2e-26 120.2 88 65.9
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 8.2e-26 120.2 88 65.9
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 1.1e-25 119.8 101 64.4
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 1.8e-25 119.0 88 65.9
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 2.4e-25 118.6 84 67.9
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 2.4e-25 118.6 83 68.7
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 3.1e-25 118.2 85 68.2
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 4.0e-25 117.9 87 67.8
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 4.0e-25 117.9 84 67.9
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 5.3e-25 117.5 83 68.7
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 5.3e-25 117.5 86 67.4
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 6.9e-25 117.1 81 67.9
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 9.0e-25 116.7 88 63.6
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 1.5e-24 115.9 86 65.1
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 2.0e-24 115.5 84 64.3
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 2.6e-24 115.2 81 70.4
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 5.8e-24 114.0 81 72.8
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 5.8e-24 114.0 84 65.5
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 5.8e-24 114.0 80 68.8
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 7.6e-24 113.6 81 70.4
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 1.0e-23 113.2 84 65.5
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 2.2e-23 112.1 88 60.2
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 6.5e-23 110.5 84 63.1
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 6.5e-23 110.5 84 63.1
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 6.5e-23 110.5 81 65.4
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 6.5e-23 110.5 78 69.2
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 8.4e-23 110.2 77 70.1
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 1.1e-22 109.8 81 70.4
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 2.5e-22 108.6 84 61.9
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 2.5e-22 108.6 84 61.9
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 5.5e-22 107.5 83 63.9
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 9.3e-22 106.7 85 64.7
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 3.5e-21 104.8 84 58.3
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 3.5e-21 104.8 86 54.7
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 6.1e-21 104.0 84 57.1
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 6.1e-21 104.0 84 57.1
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 7.9e-21 103.6 85 55.3
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 6.7e-20 100.5 81 60.5
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 1.5e-19 99.4 84 54.8
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 1.5e-19 99.4 103 55.3
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 1.9e-19 99.0 80 61.2
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 2.5e-19 98.6 81 61.7
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 5.7e-19 97.4 70 68.6
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 3.1e-17 91.7 130 43.8
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 3.4e-16 88.2 80 56.2
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 4.5e-16 87.8 85 55.3
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 1.9e-14 82.4 101 55.4
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 1.8e-12 75.9 80 47.5
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 2.0e-11 72.4 49 71.4
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 9.7e-11 70.1 48 64.6
Mapoly0013s0068 Marchantia polymorpha HOM05D008013 ORTHO05D010149 2.2e-10 68.9 85 43.5
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 2.2e-10 68.9 42 76.2
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 1.1e-09 66.6 43 67.4
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 5.3e-09 64.3 58 55.2
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 5.9e-08 60.8 50 56.0
Cre12.g484300 Chlamydomonas reinhardtii HOM05D008013 ORTHO05D010149 9.4e-06 53.5 78 35.9
Eucgr.B01381 Eucalyptus grandis HOM05D008013 ORTHO05D010149 9.4e-06 53.5 80 41.2


User provided reference genes

Program Settings