Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019953 Sechium edule HOM05D029570 ORTHO05D009918 5.5e-90 334.3 177 100.0
ClCG06G002750 Citrullus lanatus HOM05D029570 ORTHO05D009918 2.3e-43 179.5 166 64.5
CsaV3_6G008920 Cucumis sativus L. HOM05D029570 ORTHO05D009918 1.5e-34 150.2 160 59.4
MELO3C022252.2 Cucumis melo HOM05D029570 ORTHO05D009918 7.3e-34 147.9 163 58.3
Thhalv10001667m.g Eutrema salsugineum HOM05D008433 ORTHO05D009918 3.3e-10 69.3 118 39.8
CARHR142080 Cardamine hirsuta HOM05D008433 ORTHO05D009918 5.7e-10 68.6 111 42.3
Duzib138G0947 Durio zibethinus HOM05D008433 ORTHO05D009918 1.3e-09 67.4 153 37.3
Prupe.2G196100 Prunus persica HOM05D013717 ORTHO05D009918 1.6e-09 67.0 173 35.8
Cfa004661 Carpinus fangiana HOM05D008433 ORTHO05D009918 2.2e-09 66.6 175 33.7
CiPaw.01G081400 Carya illinoinensis HOM05D008433 ORTHO05D009918 2.8e-09 66.2 159 34.6
Thecc.01G334700 Theobroma cacao HOM05D008433 ORTHO05D009918 6.3e-09 65.1 153 39.9
Cpa.g.sc141.14 Carica papaya HOM05D008433 ORTHO05D009918 1.1e-08 64.3 164 36.6
AL4G46200 Arabidopsis lyrata HOM05D008433 ORTHO05D009918 3.1e-08 62.8 116 43.1
Phvul.009G257200 Phaseolus vulgaris HOM05D008433 ORTHO05D009918 1.2e-07 60.8 100 37.0
C04p72390 Brassica napus HOM05D008433 ORTHO05D009918 2.6e-07 59.7 139 33.1
BolC4t28725H Brassica oleracea HOM05D008433 ORTHO05D009918 2.6e-07 59.7 139 33.1
AUR62004552 Chenopodium quinoa HOM05D008433 ORTHO05D009918 2.6e-07 59.7 157 35.7
AT2G46735 Arabidopsis thaliana HOM05D008433 ORTHO05D009918 3.4e-07 59.3 116 37.1
AUR62022666 Chenopodium quinoa HOM05D008433 ORTHO05D009918 3.4e-07 59.3 157 35.0
CANSAT56G3323 Cannabis sativa HOM05D013717 ORTHO05D009918 5.9e-07 58.5 175 32.6
FAN10G3789 Fragaria x ananassa HOM05D013717 ORTHO05D009918 5.9e-07 58.5 171 33.3
FAN06G2608 Fragaria x ananassa HOM05D013717 ORTHO05D009918 7.7e-07 58.2 157 35.0
Sc26g0000460 Simmondsia chinensis HOM05D008433 ORTHO05D009918 7.7e-07 58.2 93 44.1
BcaC02g07007 Brassica carinata HOM05D008433 ORTHO05D009918 1.0e-06 57.8 139 33.8
FAN10G3359 Fragaria x ananassa HOM05D013717 ORTHO05D009918 1.0e-06 57.8 173 32.9
BcaB06g29468 Brassica carinata HOM05D008433 ORTHO05D009918 1.3e-06 57.4 142 35.9
BcaC02g07009 Brassica carinata HOM05D008433 ORTHO05D009918 1.3e-06 57.4 142 35.9
A04p34600 Brassica napus HOM05D008433 ORTHO05D009918 1.3e-06 57.4 151 30.5
BraA04t18918Z Brassica rapa HOM05D008433 ORTHO05D009918 1.3e-06 57.4 151 30.5
PGR031G3198 Punica granatum HOM05D008433 ORTHO05D009918 2.9e-06 56.2 94 39.4
TWI14G1180 Tripterygium wilfordii HOM05D008433 ORTHO05D009918 3.8e-06 55.8 157 33.8
VMungo1309G0842 Vigna mungo HOM05D008433 ORTHO05D009918 3.8e-06 55.8 100 40.0
Aa31LG1G28120 Aethionema arabicum HOM05D008433 ORTHO05D009918 5.0e-06 55.5 84 45.2
BolC4t21776H Brassica oleracea HOM05D000145 ORTHO05D013968 5.0e-06 55.5 144 30.6
Carub.0004s2944 Capsella rubella HOM05D008433 ORTHO05D009918 5.0e-06 55.5 147 35.4
Glyma.19G259100 Glycine max HOM05D008433 ORTHO05D009918 5.0e-06 55.5 101 37.6
Manes.05G017500 Manihot esculenta HOM05D008433 ORTHO05D009918 5.0e-06 55.5 154 33.1
Nitab4.5_0002053g0010 Nicotiana tabacum HOM05D018587 ORTHO05D009918 5.0e-06 55.5 84 41.7
BcaNung03892 Brassica carinata HOM05D008433 ORTHO05D009918 6.5e-06 55.1 100 40.0
Ah.05g179030 Amaranthus hybridus HOM05D008433 ORTHO05D009918 8.5e-06 54.7 153 32.0
FAN03G0231 Fragaria x ananassa HOM05D013717 ORTHO05D009918 8.5e-06 54.7 172 33.1
Gohir.A11G100200 Gossypium hirsutum HOM05D008433 ORTHO05D009918 8.5e-06 54.7 92 42.4


User provided reference genes

Program Settings