Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019931 Sechium edule HOM05D009154 ORTHO05D004310 6.0e-127 457.6 246 100.0
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 2.1e-87 326.2 249 74.7
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 4.7e-87 325.1 249 74.7
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 2.6e-85 319.3 248 73.4
Sed0003021 Sechium edule HOM05D009154 ORTHO05D004310 1.5e-72 276.9 236 68.2
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 8.6e-33 144.8 221 46.6
ClCG09G004940 Citrullus lanatus HOM05D009154 ORTHO05D004310 1.8e-30 137.1 234 43.2
Sed0013714 Sechium edule HOM05D009154 ORTHO05D004310 1.5e-29 134.0 216 44.0
Sed0022617 Sechium edule HOM05D009154 ORTHO05D004310 1.5e-29 134.0 221 46.6
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 6.4e-28 128.6 211 43.6
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 1.3e-25 120.9 205 43.4
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 1.9e-24 117.1 218 38.5
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 2.6e-21 106.7 210 41.0
CsaV3_7G030120 Cucumis sativus L. HOM05D009154 ORTHO05D004310 7.6e-21 105.1 221 38.5
AUR62024610 Chenopodium quinoa HOM05D009154 ORTHO05D004310 1.3e-20 104.4 214 37.9
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 4.9e-20 102.4 194 40.7
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 1.2e-18 97.8 241 35.3
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 2.7e-18 96.7 211 36.5
Ah.11g049040 Amaranthus hybridus HOM05D009154 ORTHO05D004310 4.6e-18 95.9 205 38.0
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 1.3e-17 94.4 231 39.8
Hund16457 Selenicereus undatus HOM05D009154 ORTHO05D004310 1.3e-17 94.4 207 38.6
Lalb_Chr02g0146911 Lupinus albus HOM05D012173 ORTHO05D004310 7.4e-16 88.6 192 34.9
DCAR_005743 Daucus carota HOM05D009154 ORTHO05D004310 6.2e-15 85.5 234 35.5
Eucgr.K03556 Eucalyptus grandis HOM05D009154 ORTHO05D004310 6.2e-15 85.5 210 36.7
Lju926C3T5 Lonicera japonica HOM05D009154 ORTHO05D004310 1.4e-14 84.3 180 39.4
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 4.0e-14 82.8 241 34.9
PGR044G0657 Punica granatum HOM05D009154 ORTHO05D004310 5.3e-14 82.4 214 34.6
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 4.5e-13 79.3 253 33.2
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.3e-12 77.8 119 46.2
MSTRG.5144 Avicennia marina HOM05D020384 ORTHO05D004310 2.9e-12 76.6 179 35.2
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 6.4e-12 75.5 211 36.0
HanXRQChr08g0232271 Helianthus annuus HOM05D009154 ORTHO05D004310 1.4e-11 74.3 117 41.0
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 1.9e-11 73.9 228 31.6
HanXRQChr04g0108411 Helianthus annuus HOM05D009154 ORTHO05D004310 4.2e-11 72.8 214 33.6
MD09G1285700 Malus domestica HOM05D018099 ORTHO05D020712 5.5e-11 72.4 212 34.4
TWI18G0583 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 1.2e-10 71.2 227 32.2
CANSAT54G0035 Cannabis sativa HOM05D009154 ORTHO05D014149 2.1e-10 70.5 155 38.1
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 2.1e-10 70.5 231 32.9
FAN09G2530 Fragaria x ananassa HOM05D018542 ORTHO05D014149 1.8e-09 67.4 191 31.4
Psat6g160360 Pisum sativum HOM05D012173 ORTHO05D004310 1.8e-09 67.4 185 37.8
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 3.0e-09 66.6 200 32.5
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 3.0e-09 66.6 210 27.1
Atru.chr2.269 Acer truncatum HOM05D013055 ORTHO05D004310 5.1e-09 65.9 177 36.7
ECA247G1084 Erigeron canadensis HOM05D009154 ORTHO05D004310 5.1e-09 65.9 131 38.2
SalBow3G0760 Salvia bowleyana HOM05D020384 ORTHO05D012930 5.1e-09 65.9 189 32.3
EL10As5g23572 Beta vulgaris HOM05D009154 ORTHO05D004310 6.7e-09 65.5 192 33.9
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 1.1e-08 64.7 216 32.4
ECA233G3364 Erigeron canadensis HOM05D009154 ORTHO05D004310 1.9e-08 63.9 195 30.8
Glyma.02G010700 Glycine max HOM05D012173 ORTHO05D004310 2.5e-08 63.5 212 31.6
Hma1.2p1_3252F.1_g334510 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 2.5e-08 63.5 111 45.9
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 4.3e-08 62.8 227 30.4
Oeu038954.2 Olea europaea HOM05D016587 ORTHO05D004310 1.3e-07 61.2 224 32.1
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 3.7e-07 59.7 216 32.4
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 3.7e-07 59.7 207 30.4
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 4.8e-07 59.3 215 31.2
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.8e-07 59.3 119 35.3
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 8.1e-07 58.5 214 28.0
MD17G1278300 Malus domestica HOM05D018099 ORTHO05D020712 8.1e-07 58.5 186 31.7
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 1.1e-06 58.2 214 28.0
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.1e-06 58.2 217 33.2
arahy.Tifrunner.gnm1.ann1.DQ3PTC Arachis hypogaea HOM05D012173 ORTHO05D004310 2.4e-06 57.0 212 29.2
Ciclev10002618m.g Citrus clementina HOM05D013055 ORTHO05D014149 2.4e-06 57.0 187 35.3
TWI36G1520 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 2.4e-06 57.0 227 29.5
VMungo0720G2010 Vigna mungo HOM05D012173 ORTHO05D004310 2.4e-06 57.0 218 28.0
Cpa.g.sc18.87 Carica papaya HOM05D009814 ORTHO05D004310 5.3e-06 55.8 242 25.6
SalBow5G2792 Salvia bowleyana HOM05D017048 ORTHO05D018530 5.3e-06 55.8 111 38.7


User provided reference genes

Program Settings