Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 2.1e-112 409.1 209 100.0
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 6.2e-64 248.1 145 87.6
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 1.8e-63 246.5 145 86.9
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 4.0e-63 245.4 150 84.7
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 3.4e-62 242.3 146 87.0
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 5.6e-57 224.9 145 77.9
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 7.3e-57 224.6 145 78.6
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 9.5e-57 224.2 145 76.6
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 2.1e-56 223.0 145 77.9
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 3.6e-56 222.2 145 77.2
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 4.7e-56 221.9 145 78.6
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 4.7e-56 221.9 147 78.9
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 4.7e-56 221.9 145 75.2
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 6.2e-56 221.5 147 78.9
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.4e-55 220.3 147 78.2
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 1.4e-55 220.3 145 78.6
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 2.3e-55 219.5 147 78.2
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 4.0e-55 218.8 146 77.4
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 5.2e-55 218.4 145 75.9
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 5.2e-55 218.4 150 75.3
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 8.9e-55 217.6 145 77.2
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.9e-55 217.6 147 77.6
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.2e-54 217.2 150 76.7
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 1.2e-54 217.2 146 78.1
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 1.5e-54 216.9 145 74.5
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 1.5e-54 216.9 150 76.7
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.5e-54 216.9 145 75.9
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 2.0e-54 216.5 145 73.8
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 2.0e-54 216.5 145 73.8
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 2.0e-54 216.5 145 74.5
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 2.6e-54 216.1 145 75.2
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 2.6e-54 216.1 145 75.2
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.6e-54 216.1 150 73.3
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 3.4e-54 215.7 150 74.0
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 4.4e-54 215.3 150 73.3
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.4e-54 215.3 150 73.3
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 5.8e-54 214.9 134 80.6
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 7.5e-54 214.5 145 74.5
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.3e-53 213.8 145 77.9
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.7e-53 213.4 145 73.8
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.7e-53 213.4 134 79.9
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 2.2e-53 213.0 145 73.8
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 2.2e-53 213.0 150 74.7
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 2.2e-53 213.0 140 77.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 3.7e-53 212.2 145 76.6
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 3.7e-53 212.2 150 72.7
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 4.9e-53 211.8 145 73.8
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.1e-52 210.7 150 75.3
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.4e-52 210.3 134 80.6
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.4e-52 210.3 145 75.9
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.9e-52 209.9 140 75.7
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 1.9e-52 209.9 134 77.6
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.9e-52 209.9 152 72.4
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.4e-52 209.5 132 78.8
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 2.4e-52 209.5 150 72.7
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 3.2e-52 209.1 148 74.3
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 3.2e-52 209.1 148 74.3
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 3.2e-52 209.1 148 74.3
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 3.2e-52 209.1 145 73.8
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 4.1e-52 208.8 134 77.6
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 5.4e-52 208.4 140 75.7
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 5.4e-52 208.4 151 72.2
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.1e-52 208.0 145 73.1
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 7.1e-52 208.0 157 70.7
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 9.2e-52 207.6 157 68.8
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 9.2e-52 207.6 145 72.4
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 9.2e-52 207.6 145 72.4
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 9.2e-52 207.6 122 84.4
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.2e-51 207.2 150 72.7
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 2.1e-51 206.5 150 70.0
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 2.7e-51 206.1 151 71.5
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 2.7e-51 206.1 146 76.0
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.5e-51 205.7 145 72.4
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 3.5e-51 205.7 145 72.4
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 3.5e-51 205.7 133 78.2
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 3.5e-51 205.7 119 84.9
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 4.6e-51 205.3 152 72.4
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 4.6e-51 205.3 152 72.4
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 6.0e-51 204.9 155 71.0
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.8e-51 204.5 145 72.4
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 1.3e-50 203.8 153 70.6
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 1.3e-50 203.8 152 71.1
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 1.7e-50 203.4 146 70.5
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 2.3e-50 203.0 150 70.0
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 3.9e-50 202.2 145 71.7
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 5.1e-50 201.8 145 73.1
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 6.6e-50 201.4 140 72.1
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 1.1e-49 200.7 145 73.1
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.9e-49 199.9 151 70.2
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 2.5e-49 199.5 151 70.2
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 3.3e-49 199.1 153 69.3
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 3.3e-49 199.1 150 67.3
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 7.3e-49 198.0 122 79.5
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 7.3e-49 198.0 121 78.5
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 2.8e-48 196.1 145 69.0
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 2.8e-48 196.1 126 75.4
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 2.8e-48 196.1 146 67.8
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 4.7e-48 195.3 153 67.3
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.4e-47 193.7 126 76.2
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.8e-47 193.4 146 68.5
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 1.8e-47 193.4 152 65.1
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 3.1e-47 192.6 175 60.6
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 4.0e-47 192.2 146 65.8
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 5.2e-47 191.8 149 66.4
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 8.9e-47 191.0 121 77.7
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 1.3e-45 187.2 146 70.5
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.4e-44 183.7 144 65.3
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.9e-44 183.3 150 65.3
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 4.8e-40 168.7 106 82.1
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 1.8e-39 166.8 120 68.3
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 8.4e-37 157.9 99 79.8
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 5.4e-36 155.2 122 64.8
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 7.1e-36 154.8 121 61.2
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 4.6e-35 152.1 88 86.4
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 3.0e-34 149.4 130 60.0
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 8.7e-34 147.9 93 79.6
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 7.3e-33 144.8 120 59.2
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.3e-32 144.1 88 79.5
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 1.8e-31 140.2 99 66.7
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 2.0e-30 136.7 89 75.3
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 9.3e-28 127.9 96 69.8
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.7e-27 126.3 81 75.3
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 6.0e-27 125.2 81 74.1
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 1.4e-20 104.0 87 50.6
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.0e-18 97.8 64 73.4
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 7.1e-12 75.1 104 45.2


User provided reference genes

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