Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019829 Sechium edule HOM05D000047 ORTHO05D001383 3.3e-113 411.8 214 100.0
Sed0009351 Sechium edule HOM05D000047 ORTHO05D001383 2.4e-63 246.1 140 92.9
Sed0008905 Sechium edule HOM05D000047 ORTHO05D001383 2.3e-50 203.0 111 96.4
Sed0016038 Sechium edule HOM05D000047 ORTHO05D001383 4.0e-50 202.2 115 93.9
ClCG09G014950 Citrullus lanatus HOM05D000047 ORTHO05D001383 1.6e-43 180.3 196 52.6
MELO3C033014.2 Cucumis melo HOM05D000047 ORTHO05D001383 5.0e-37 158.7 196 46.9
Sed0003251 Sechium edule HOM05D020903 ORTHO05D001383 1.5e-33 147.1 188 47.3
Sed0019885 Sechium edule HOM05D010179 ORTHO05D008839 1.4e-31 140.6 83 90.4
Sed0021005 Sechium edule HOM05D000047 ORTHO05D001383 6.2e-27 125.2 73 90.4
Sed0004738 Sechium edule HOM05D020903 ORTHO05D001383 7.5e-25 118.2 131 53.4
Sed0019732 Sechium edule HOM05D020903 ORTHO05D001383 1.2e-22 110.9 106 57.5
Sed0021823 Sechium edule HOM05D010179 ORTHO05D001383 6.6e-21 105.1 101 56.4
Sed0005898 Sechium edule HOM05D010179 ORTHO05D001383 2.5e-20 103.2 101 55.4
ClCG02G008530 Citrullus lanatus HOM05D000047 ORTHO05D001383 7.3e-20 101.7 144 45.8
Sed0000384 Sechium edule HOM05D010179 ORTHO05D001383 8.9e-18 94.7 101 49.5
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 3.4e-17 92.8 238 34.5
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 3.4e-17 92.8 238 34.5
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 4.4e-17 92.4 230 33.9
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 4.4e-17 92.4 230 33.9
QL04p080646 Quercus lobata HOM05D000047 ORTHO05D001383 4.9e-16 89.0 208 35.6
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 6.4e-16 88.6 238 34.9
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 6.4e-16 88.6 238 34.9
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 1.1e-15 87.8 238 34.0
MELO3C021895.2 Cucumis melo HOM05D001244 ORTHO05D001076 1.6e-14 84.0 142 35.9
Sed0027224 Sechium edule HOM05D010179 ORTHO05D001383 2.3e-13 80.1 86 52.3
Sed0013507 Sechium edule HOM05D010179 ORTHO05D001383 8.6e-13 78.2 85 50.6
Sed0015614 Sechium edule HOM05D010179 ORTHO05D008839 8.6e-13 78.2 120 40.8
Sed0018180 Sechium edule HOM05D010179 ORTHO05D008839 1.5e-12 77.4 97 43.3
Sed0010281 Sechium edule HOM05D010179 ORTHO05D008839 1.9e-12 77.0 89 47.2
PGSC0003DMG400036829 Solanum tuberosum HOM05D000047 ORTHO05D010949 2.1e-11 73.6 128 39.8
ClCG03G010450 Citrullus lanatus HOM05D000047 ORTHO05D001383 2.8e-11 73.2 73 57.5
Sed0016940 Sechium edule HOM05D000047 ORTHO05D001383 2.8e-11 73.2 82 53.7
Sopen09g023170 Solanum pennellii HOM05D000047 ORTHO05D000044 3.6e-11 72.8 137 40.9
Sopen10g020080 Solanum pennellii HOM05D000002 ORTHO05D010949 3.6e-11 72.8 200 31.5
Sopen02g002310 Solanum pennellii HOM05D000047 ORTHO05D001383 4.7e-11 72.4 106 43.4
Sopen09g026470 Solanum pennellii HOM05D000047 ORTHO05D010949 6.2e-11 72.0 142 40.8
Sopen09g025040 Solanum pennellii HOM05D000047 ORTHO05D010949 2.4e-10 70.1 154 35.1
Sed0027847 Sechium edule HOM05D010179 ORTHO05D001383 5.2e-10 68.9 77 46.8
Sed0005241 Sechium edule HOM05D010179 ORTHO05D001383 6.9e-10 68.6 78 47.4
FvH4_4g25732 Fragaria vesca HOM05D000047 ORTHO05D001383 8.9e-10 68.2 114 38.6
Sopen01g028490 Solanum pennellii HOM05D000047 ORTHO05D000044 8.9e-10 68.2 203 32.0
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 8.9e-10 68.2 150 32.7
FvH4_5g32461 Fragaria vesca HOM05D000047 ORTHO05D001383 2.0e-09 67.0 117 38.5
CAN.G682.7 Capsicum annuum HOM05D000047 ORTHO05D010949 5.8e-09 65.5 106 36.8
ClCG04G003080 Citrullus lanatus HOM05D000047 ORTHO05D001383 7.6e-09 65.1 130 36.9
Sopen08g014520 Solanum pennellii HOM05D000047 ORTHO05D010949 1.3e-08 64.3 108 40.7
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.7e-08 63.9 186 30.6
ClCG07G003040 Citrullus lanatus HOM05D000047 ORTHO05D001383 3.8e-08 62.8 161 31.7
FvH4_4g01161 Fragaria vesca HOM05D000047 ORTHO05D001383 6.4e-08 62.0 101 39.6
PGSC0003DMG400040525 Solanum tuberosum HOM05D000047 ORTHO05D010949 8.4e-08 61.6 122 33.6
ClCG03G008770 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.4e-07 60.8 123 39.0
FvH4_4g22272 Fragaria vesca HOM05D008419 ORTHO05D008839 2.1e-06 57.0 177 31.6
Sopen01g008120 Solanum pennellii HOM05D000047 ORTHO05D010949 2.7e-06 56.6 131 36.6
Sed0011865 Sechium edule HOM05D020903 ORTHO05D001383 3.5e-06 56.2 56 55.4
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 6.0e-06 55.5 228 27.6
Sed0001259 Sechium edule HOM05D020903 ORTHO05D001383 7.8e-06 55.1 55 54.5
Sed0011187 Sechium edule HOM05D020903 ORTHO05D001383 7.8e-06 55.1 55 54.5


User provided reference genes

Program Settings