Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 3.4e-133 478.4 252 100.0
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 1.3e-89 333.6 246 72.0
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 4.3e-80 302.0 244 68.4
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 4.1e-78 295.4 235 68.1
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 5.0e-76 288.5 250 67.2
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 4.2e-75 285.4 243 63.8
ClCG08G004150 Citrullus lanatus HOM05D007873 ORTHO05D008474 9.1e-46 188.0 246 47.2
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 1.0e-44 184.5 247 44.9
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 8.5e-44 181.4 238 46.2
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 2.8e-39 166.4 235 46.0
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 8.3e-39 164.9 240 45.0
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 1.1e-38 164.5 262 41.6
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 4.5e-37 159.1 234 44.4
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 1.9e-35 153.7 216 41.2
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.2e-32 144.4 245 40.4
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 1.2e-32 144.4 272 37.9
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 1.5e-32 144.1 238 39.5
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 9.8e-32 141.4 243 39.1
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 6.3e-31 138.7 238 40.8
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.4e-30 137.5 243 38.3
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 4.1e-30 136.0 234 38.5
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.7e-29 133.3 232 37.1
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 6.6e-28 128.6 232 33.2
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.9e-27 127.1 247 34.8
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 6.1e-26 122.1 233 34.8
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 6.1e-26 122.1 244 33.6
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 8.0e-26 121.7 195 40.0
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.0e-25 121.3 233 35.2
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 1.4e-25 120.9 233 34.3
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 1.4e-25 120.9 189 37.6
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 2.3e-25 120.2 263 36.9
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 3.1e-25 119.8 222 34.7
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 4.0e-25 119.4 198 39.4
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 3.4e-24 116.3 272 36.0
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 3.4e-24 116.3 196 38.3
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 3.4e-24 116.3 267 34.1
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 3.4e-24 116.3 231 31.6
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 1.7e-23 114.0 244 33.6
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 1.7e-23 114.0 196 38.3
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 1.7e-23 114.0 267 34.8
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 6.4e-23 112.1 267 33.7
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 8.3e-23 111.7 249 36.1
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 1.2e-21 107.8 244 32.8
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 2.0e-21 107.1 241 34.0
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 4.6e-21 105.9 241 33.6
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 3.9e-20 102.8 203 34.0
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.9e-19 100.5 241 33.6
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 3.3e-19 99.8 252 31.3
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 7.3e-19 98.6 259 32.4
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.2e-16 91.3 249 30.1
EL10Ac9g22998 Beta vulgaris HOM05D008909 ORTHO05D008474 1.5e-16 90.9 257 30.7
EL10Ac9g23005 Beta vulgaris HOM05D008909 ORTHO05D008474 4.4e-16 89.4 202 32.7
Rhsim02G0080100 Rhododendron simsii HOM05D007873 ORTHO05D008474 2.2e-15 87.0 135 43.0
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 2.9e-15 86.7 233 31.3
CANSAT11G2484 Cannabis sativa HOM05D019586 ORTHO05D008474 2.9e-15 86.7 198 35.4
Duzib147G1542 Durio zibethinus HOM05D007873 ORTHO05D008474 2.9e-15 86.7 169 32.0
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 3.7e-15 86.3 254 31.9
CANSAT11G2400 Cannabis sativa HOM05D019586 ORTHO05D008474 4.9e-15 85.9 235 31.1
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 8.3e-15 85.1 201 32.3
CANSAT11G0893 Cannabis sativa HOM05D019586 ORTHO05D008474 1.1e-14 84.7 235 30.2
Gohir.A13G077400 Gossypium hirsutum HOM05D007873 ORTHO05D008474 3.2e-14 83.2 213 30.0
CANSAT11G1228 Cannabis sativa HOM05D019586 ORTHO05D008474 9.2e-14 81.6 199 30.7
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 1.6e-13 80.9 208 32.2
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 1.6e-13 80.9 196 31.6
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 3.5e-13 79.7 246 29.7
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 3.5e-13 79.7 181 28.2
EL10Ac9g23001 Beta vulgaris HOM05D008909 ORTHO05D008474 6.0e-13 79.0 228 29.4
EL10Ac9g23003 Beta vulgaris HOM05D008909 ORTHO05D008474 6.0e-13 79.0 228 29.4
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 6.0e-13 79.0 231 29.9
DCAR_007849 Daucus carota HOM05D007873 ORTHO05D008474 1.0e-12 78.2 160 33.1
DCAR_007850 Daucus carota HOM05D007873 ORTHO05D008474 1.0e-12 78.2 160 33.1
EL10Ac9g22995 Beta vulgaris HOM05D008909 ORTHO05D008474 1.3e-12 77.8 214 26.6
AUR62032929 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.7e-12 77.4 226 29.2
EL10Ac9g22608 Beta vulgaris HOM05D008909 ORTHO05D008474 2.3e-12 77.0 207 27.5
AUR62037920 Chenopodium quinoa HOM05D008909 ORTHO05D008474 5.1e-12 75.9 246 27.6
AUR62044760 Chenopodium quinoa HOM05D008909 ORTHO05D008474 5.1e-12 75.9 246 27.6
EL10Ac9g22993 Beta vulgaris HOM05D008909 ORTHO05D008474 6.6e-12 75.5 181 26.5
EL10Ac9g22999 Beta vulgaris HOM05D008909 ORTHO05D008474 8.6e-12 75.1 254 29.1
EL10Ac9g22994 Beta vulgaris HOM05D008909 ORTHO05D008474 1.1e-11 74.7 213 26.3
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 1.6e-10 70.9 262 25.6
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 6.2e-10 68.9 236 26.3
DCAR_028983 Daucus carota HOM05D008909 ORTHO05D008474 2.3e-09 67.0 202 28.2
Hma1.2p1_1796F.1_g302765 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.0e-08 63.9 88 43.2
EL10Ac9g22767 Beta vulgaris HOM05D000027 ORTHO05D000066 2.6e-08 63.5 211 25.1
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 2.6e-08 63.5 201 29.4
EL10Ac5g11134 Beta vulgaris HOM05D007873 ORTHO05D008474 4.9e-07 59.3 113 33.6
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 4.9e-07 59.3 222 25.2
Sed0017012 Sechium edule HOM05D007873 ORTHO05D008474 4.9e-07 59.3 190 26.3
AUR62027670 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.1e-06 58.2 210 30.0


User provided reference genes

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