Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 1.3e-168 596.3 303 100.0
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 2.1e-142 509.2 304 85.2
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 6.1e-137 491.1 350 74.0
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 7.2e-106 387.9 290 67.2
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 4.7e-105 385.2 300 65.7
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 2.3e-104 382.9 279 69.5
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 5.7e-103 378.3 260 71.2
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 5.7e-103 378.3 260 71.2
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 5.7e-103 378.3 279 67.7
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 7.5e-103 377.9 292 66.1
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 9.8e-103 377.5 291 65.3
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 1.3e-102 377.1 307 62.9
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 1.3e-102 377.1 261 71.6
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 1.3e-102 377.1 296 64.5
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 1.7e-102 376.7 260 71.2
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 2.2e-102 376.3 305 64.9
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 4.8e-102 375.2 261 70.1
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 6.3e-102 374.8 265 69.4
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 1.1e-101 374.0 301 63.8
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 1.1e-101 374.0 301 64.5
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 1.1e-101 374.0 307 62.9
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 3.1e-101 372.5 251 73.3
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 3.1e-101 372.5 298 65.1
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 3.1e-101 372.5 261 69.7
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 4.1e-101 372.1 260 68.5
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 2.0e-100 369.8 303 64.0
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 4.5e-100 368.6 276 66.7
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 5.9e-100 368.2 281 67.3
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 3.8e-99 365.5 261 68.6
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 6.5e-99 364.8 257 70.4
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 6.5e-99 364.8 261 68.6
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 8.6e-99 364.4 352 56.8
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 1.5e-98 363.6 299 64.5
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 7.2e-98 361.3 258 69.4
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 7.2e-98 361.3 261 66.7
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 7.2e-98 361.3 290 61.7
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 1.2e-97 360.5 260 67.7
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 2.1e-97 359.8 258 67.4
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 4.7e-97 358.6 283 63.3
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 8.0e-97 357.8 280 63.9
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 1.8e-96 356.7 260 68.8
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 1.8e-96 356.7 290 61.4
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 4.0e-96 355.5 299 60.5
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 4.0e-96 355.5 258 67.1
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 8.8e-96 354.4 299 62.2
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 1.2e-95 354.0 258 67.8
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 2.0e-95 353.2 298 62.8
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 2.6e-95 352.8 301 60.1
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 3.4e-95 352.4 260 66.5
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 9.8e-95 350.9 263 65.4
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 2.2e-94 349.7 257 65.4
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 3.1e-93 345.9 274 64.2
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 4.1e-93 345.5 248 68.1
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 1.2e-92 344.0 238 71.4
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 1.6e-92 343.6 259 65.3
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 2.3e-91 339.7 245 67.3
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 6.6e-91 338.2 264 63.6
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 1.1e-90 337.4 264 63.6
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 2.8e-89 332.8 289 58.5
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 3.6e-89 332.4 265 64.5
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 3.6e-89 332.4 248 66.9
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 6.8e-88 328.2 261 63.6
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 1.7e-86 323.6 319 55.5
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 6.4e-86 321.6 266 63.5
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 8.3e-86 321.2 266 59.8
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 2.4e-85 319.7 269 58.7
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 7.0e-85 318.2 249 63.5
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 7.0e-85 318.2 257 61.5
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 9.2e-85 317.8 312 56.7
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 2.0e-84 316.6 266 59.8
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 3.5e-84 315.8 269 58.7
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 4.6e-84 315.5 301 57.5
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 7.8e-84 314.7 277 61.4
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 3.9e-83 312.4 292 56.8
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 5.0e-83 312.0 272 57.7
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 5.0e-83 312.0 272 57.7
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 3.3e-82 309.3 269 58.0
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 4.3e-82 308.9 269 57.6
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 7.3e-82 308.1 241 64.3
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 9.5e-82 307.8 263 59.7
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 1.2e-81 307.4 298 57.7
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 2.1e-81 306.6 188 83.0
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 3.6e-81 305.8 265 59.6
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 8.0e-81 304.7 298 57.4
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 3.1e-80 302.8 261 59.8
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 8.9e-80 301.2 291 53.6
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 8.9e-80 301.2 291 53.6
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 3.7e-78 295.8 261 57.5
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 3.6e-73 279.3 298 51.7
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 2.0e-71 273.5 196 67.3
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 1.6e-68 263.8 208 62.0
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 3.0e-67 259.6 259 51.7
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 2.8e-65 253.1 208 61.5
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 6.0e-60 235.3 170 68.8
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 3.3e-58 229.6 213 57.3
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 1.6e-57 227.3 190 57.9
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 2.1e-57 226.9 252 48.4
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 8.1e-57 224.9 303 46.5
FAN14G3231 Fragaria x ananassa HOM05D006979 ORTHO05D008857 5.2e-56 222.2 158 65.8
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 4.6e-52 209.1 208 55.8
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 5.1e-51 205.7 201 55.7
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 5.8e-39 165.6 184 52.7
SEGI_25115 Sequoiadendron giganteum HOM05D006979 ORTHO05D008857 3.8e-38 162.9 135 57.0
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 3.7e-33 146.4 147 53.7
CDE05G2075 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 3.3e-18 96.7 189 34.4
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 3.3e-18 96.7 283 31.1
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 3.3e-18 96.7 270 33.3
Medtr8g019490 Medicago truncatula HOM05D006979 ORTHO05D008857 2.8e-17 93.6 103 44.7
RcHm_v2.0_Chr6g0307231 Rosa chinensis HOM05D006979 ORTHO05D008857 2.3e-11 73.9 53 71.7
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 1.5e-10 71.2 119 37.0
RcHm_v2.0_Chr3g0497381 Rosa chinensis HOM05D006979 ORTHO05D008857 2.6e-10 70.5 53 67.9
Mapoly0030s0154 Marchantia polymorpha HOM05D006979 ORTHO05D008857 9.1e-08 62.0 61 44.3
CiPaw.09G194500 Carya illinoinensis HOM05D003730 ORTHO05D004458 7.7e-07 58.9 233 27.0
CBR_g8964 Chara braunii HOM05D003730 ORTHO05D004458 3.8e-06 56.6 98 34.7
Lj1g0003421 Lotus japonicus HOM05D003730 ORTHO05D004458 3.8e-06 56.6 237 26.2
Actinidia13152 Actinidia chinensis HOM05D003730 ORTHO05D004458 6.5e-06 55.8 219 26.0
arahy.Tifrunner.gnm1.ann1.D1PGNE Arachis hypogaea HOM05D003730 ORTHO05D004458 6.5e-06 55.8 234 26.1
arahy.Tifrunner.gnm1.ann1.CCZS04 Arachis hypogaea HOM05D003730 ORTHO05D004458 8.5e-06 55.5 234 26.1
RcHm_v2.0_Chr5g0050831 Rosa chinensis HOM05D006655 ORTHO05D007986 8.5e-06 55.5 254 24.8


User provided reference genes

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