Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019691 Sechium edule HOM05D001494 ORTHO05D001364 9.5e-66 253.4 135 100.0
Sed0008028 Sechium edule HOM05D001494 ORTHO05D001364 1.1e-48 196.8 138 83.3
CsaV3_6G001440 Cucumis sativus L. HOM05D001494 ORTHO05D001364 1.7e-46 189.5 140 79.3
MELO3C008248.2 Cucumis melo HOM05D001494 ORTHO05D001364 5.4e-45 184.5 140 77.1
ClCG11G006560 Citrullus lanatus HOM05D001494 ORTHO05D001364 8.6e-43 177.2 118 83.1
Duzib268G0406 Durio zibethinus HOM05D001494 ORTHO05D001364 1.1e-34 150.2 136 66.2
CiPaw.01G080800 Carya illinoinensis HOM05D001494 ORTHO05D001364 2.6e-31 139.0 138 64.5
Haze_15705 Corylus avellana HOM05D005894 ORTHO05D007461 9.9e-31 137.1 137 65.7
Haze_15714 Corylus avellana HOM05D001494 ORTHO05D001364 4.9e-30 134.8 142 61.3
Thecc.01G335400 Theobroma cacao HOM05D001494 ORTHO05D001364 8.4e-30 134.0 138 61.6
Manes.05G018100 Manihot esculenta HOM05D001494 ORTHO05D001364 1.1e-29 133.7 123 65.0
Atru.chr5.747 Acer truncatum HOM05D001494 ORTHO05D001364 3.2e-29 132.1 140 62.1
Duzib138G1081 Durio zibethinus HOM05D001494 ORTHO05D001364 7.8e-28 127.5 138 60.1
arahy.Tifrunner.gnm1.ann1.0T87WI Arachis hypogaea HOM05D001494 ORTHO05D001364 5.1e-27 124.8 136 61.0
arahy.Tifrunner.gnm1.ann1.T3QUTI Arachis hypogaea HOM05D001494 ORTHO05D001364 5.1e-27 124.8 136 61.0
Potri.014G103900 Populus trichocarpa HOM05D001494 ORTHO05D001364 8.7e-27 124.0 137 59.9
VMungo0331G1691 Vigna mungo HOM05D001494 ORTHO05D001364 8.7e-27 124.0 134 62.7
Ciclev10022233m.g Citrus clementina HOM05D001494 ORTHO05D001364 1.5e-26 123.2 138 59.4
Manes.01G241400 Manihot esculenta HOM05D001494 ORTHO05D001364 1.5e-26 123.2 132 60.6
Sabra14G0076400 Salix brachista HOM05D001494 ORTHO05D001364 1.5e-26 123.2 137 61.3
Cpa.g.sc141.17 Carica papaya HOM05D001494 ORTHO05D001364 1.9e-26 122.9 139 62.6
Actinidia07997 Actinidia chinensis HOM05D001494 ORTHO05D001364 2.5e-26 122.5 117 62.4
Gohir.A12G115700 Gossypium hirsutum HOM05D001494 ORTHO05D001364 2.5e-26 122.5 131 60.3
Lalb_Chr04g0254231 Lupinus albus HOM05D001494 ORTHO05D001364 2.5e-26 122.5 135 60.7
Medtr8g024650 Medicago truncatula HOM05D001494 ORTHO05D001364 2.5e-26 122.5 137 60.6
Dinv32635 Davidia involucrata HOM05D001494 ORTHO05D001364 3.3e-26 122.1 140 60.0
Gohir.A12G115500 Gossypium hirsutum HOM05D001494 ORTHO05D001364 9.6e-26 120.6 138 56.5
Cc02_g39850 Coffea canephora HOM05D001494 ORTHO05D001364 2.1e-25 119.4 139 58.3
CiPaw.02G044200 Carya illinoinensis HOM05D001494 ORTHO05D001364 2.8e-25 119.0 137 59.9
Gorai.008G129300 Gossypium raimondii HOM05D001494 ORTHO05D001364 2.8e-25 119.0 131 58.0
Gohir.D12G119100 Gossypium hirsutum HOM05D001494 ORTHO05D001364 1.1e-24 117.1 136 55.9
Gohir.D12G119300 Gossypium hirsutum HOM05D001494 ORTHO05D001364 1.4e-24 116.7 134 56.7
Gorai.008G129100 Gossypium raimondii HOM05D001494 ORTHO05D001364 3.1e-24 115.5 136 55.1
Lj3g0005361 Lotus japonicus HOM05D001494 ORTHO05D001364 4.0e-24 115.2 117 59.0
QL08p046724 Quercus lobata HOM05D001494 ORTHO05D001364 6.9e-24 114.4 137 57.7
Phvul.010G118100 Phaseolus vulgaris HOM05D001494 ORTHO05D001364 1.5e-23 113.2 137 58.4
Potri.002G177600 Populus trichocarpa HOM05D001494 ORTHO05D001364 1.5e-23 113.2 137 57.7
Glyma.07G051300 Glycine max HOM05D001494 ORTHO05D001364 2.6e-23 112.5 142 57.0
Peaxi162Scf00767g00418 Petunia axillaris HOM05D001494 ORTHO05D001364 2.6e-23 112.5 126 58.7
COL.COLO4_06219 Corchorus olitorius HOM05D001494 ORTHO05D001364 4.5e-23 111.7 128 57.0
Duzib133G0286 Durio zibethinus HOM05D001494 ORTHO05D001364 7.6e-23 110.9 138 54.3
TWI59G0773 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 1.3e-22 110.2 106 61.3
Hma1.2p1_0180F.1_g079880 Hydrangea macrophylla HOM05D001494 ORTHO05D001364 8.4e-22 107.5 114 61.4
FAN06G0420 Fragaria x ananassa HOM05D001494 ORTHO05D001364 1.4e-21 106.7 134 54.5
Oeu042965.1 Olea europaea HOM05D001494 ORTHO05D001364 1.4e-21 106.7 139 54.7
TWI63G0621 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 1.9e-21 106.3 137 52.6
CANSAT11G1826 Cannabis sativa HOM05D001494 ORTHO05D001364 3.2e-21 105.5 164 46.3
FvH4_7g17400 Fragaria vesca HOM05D001494 ORTHO05D001364 4.2e-21 105.1 134 53.7
Glyma.16G020400 Glycine max HOM05D001494 ORTHO05D001364 4.2e-21 105.1 119 58.8
TPR.G25262 Trifolium pratense HOM05D001494 ORTHO05D001364 7.1e-21 104.4 145 55.9
Prupe.2G195600 Prunus persica HOM05D001494 ORTHO05D001364 9.3e-21 104.0 114 56.1
vmacro12651 Vaccinium macrocarpon HOM05D001494 ORTHO05D001364 1.2e-20 103.6 124 56.5
FAN06G3080 Fragaria x ananassa HOM05D001494 ORTHO05D001364 1.6e-20 103.2 134 53.0
Lalb_Chr17g0342941 Lupinus albus HOM05D001494 ORTHO05D001364 1.6e-20 103.2 116 56.9
FAN03G1664 Fragaria x ananassa HOM05D001494 ORTHO05D001364 4.6e-20 101.7 134 52.2
GSVIVG01027418001 Vitis vinifera HOM05D001494 ORTHO05D001364 1.3e-19 100.1 85 64.7
TWI32G1287 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 2.3e-19 99.4 135 52.6
Sp1g01130 Schrenkiella parvula HOM05D001494 ORTHO05D001364 5.1e-19 98.2 120 57.5
Ca_23493_v3 Cicer arietinum L. HOM05D001494 ORTHO05D001364 1.1e-18 97.1 141 53.2
Ca_29945_v3 Cicer arietinum L. HOM05D001494 ORTHO05D001364 1.1e-18 97.1 141 53.2
CARHR001310 Cardamine hirsuta HOM05D001494 ORTHO05D001364 1.9e-18 96.3 123 55.3
A09p68940 Brassica napus HOM05D001494 ORTHO05D001364 2.5e-18 95.9 122 55.7
BraA09t42234Z Brassica rapa HOM05D001494 ORTHO05D001364 2.5e-18 95.9 122 55.7
C08p53530 Brassica napus HOM05D001494 ORTHO05D001364 3.3e-18 95.5 123 55.3
Oeu007905.1 Olea europaea HOM05D001494 ORTHO05D001364 4.3e-18 95.1 138 51.4
Hund16741 Selenicereus undatus HOM05D001494 ORTHO05D001364 4.3e-18 95.1 147 51.0
Thhalv10008482m.g Eutrema salsugineum HOM05D001494 ORTHO05D001364 7.4e-18 94.4 120 54.2
Lalb_Chr10g0100811 Lupinus albus HOM05D001494 ORTHO05D001364 7.4e-18 94.4 89 59.6
CSS0012368 Camellia sinensis var. sinensis HOM05D001494 ORTHO05D001364 9.6e-18 94.0 110 55.5
BolC8t52868H Brassica oleracea HOM05D001494 ORTHO05D001364 1.3e-17 93.6 122 54.9
RcHm_v2.0_Chr1g0360841 Rosa chinensis HOM05D001494 ORTHO05D001364 1.6e-17 93.2 133 48.9
Aa31LG5G1080 Aethionema arabicum HOM05D001494 ORTHO05D001364 2.1e-17 92.8 116 56.0
TWI31G0504 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 2.1e-17 92.8 134 50.7
AL6G52610 Arabidopsis lyrata HOM05D001494 ORTHO05D001364 3.6e-17 92.0 139 52.5
Ah.05g179100 Amaranthus hybridus HOM05D001494 ORTHO05D001364 1.1e-16 90.5 135 49.6
FAN01G2795 Fragaria x ananassa HOM05D001494 ORTHO05D001364 1.1e-16 90.5 133 47.4
FAN10G0868 Fragaria x ananassa HOM05D001494 ORTHO05D001364 1.1e-16 90.5 133 47.4
EL10Ac1g00201 Beta vulgaris HOM05D001494 ORTHO05D001364 1.8e-16 89.7 139 50.4
MD01G1087000 Malus domestica HOM05D001494 ORTHO05D001364 1.8e-16 89.7 140 48.6
AL1G11340 Arabidopsis lyrata HOM05D001494 ORTHO05D001364 2.4e-16 89.4 120 54.2
AT4G00850 Arabidopsis thaliana HOM05D001494 ORTHO05D001364 3.1e-16 89.0 141 50.4
CAN.G271.5 Capsicum annuum HOM05D001494 ORTHO05D001364 4.0e-16 88.6 131 50.4
Thhalv10028952m.g Eutrema salsugineum HOM05D001494 ORTHO05D001364 4.0e-16 88.6 131 52.7
SalBow5G3641 Salvia bowleyana HOM05D001494 ORTHO05D001364 6.9e-16 87.8 145 50.3
BraA10t42351Z Brassica rapa HOM05D001494 ORTHO05D001364 1.5e-15 86.7 123 52.8
FAN10G2837 Fragaria x ananassa HOM05D001494 ORTHO05D001364 2.0e-15 86.3 133 45.9
Oeu022738.1 Olea europaea HOM05D001494 ORTHO05D001364 4.5e-15 85.1 140 52.9
TWI14G1290 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 4.5e-15 85.1 86 60.5
MSTRG.4796 Avicennia marina HOM05D001494 ORTHO05D001364 5.8e-15 84.7 89 57.3
THA.LOC104825894 Tarenaya hassleriana HOM05D001494 ORTHO05D001364 7.6e-15 84.3 124 48.4
PGSC0003DMG400005527 Solanum tuberosum HOM05D001494 ORTHO05D001364 1.3e-14 83.6 124 47.6
Carub.0001s0105 Capsella rubella HOM05D001494 ORTHO05D001364 4.9e-14 81.6 120 51.7
Nitab4.5_0001117g0090 Nicotiana tabacum HOM05D001494 ORTHO05D001364 4.9e-14 81.6 130 45.4
Solyc10g009280.4 Solanum lycopersicum HOM05D001494 ORTHO05D001364 4.9e-14 81.6 126 46.8
BolC5t28862H Brassica oleracea HOM05D001494 ORTHO05D001364 8.4e-14 80.9 125 51.2
Actinidia20278 Actinidia chinensis HOM05D001494 ORTHO05D001364 1.1e-13 80.5 148 46.6
C05p00780 Brassica napus HOM05D001494 ORTHO05D001364 1.9e-13 79.7 100 53.0
Sp6g01270 Schrenkiella parvula HOM05D001494 ORTHO05D001364 3.2e-13 79.0 117 53.8
Nitab4.5_0000768g0010 Nicotiana tabacum HOM05D001494 ORTHO05D001364 5.5e-13 78.2 129 46.5
Sopen10g005060 Solanum pennellii HOM05D001494 ORTHO05D001364 5.5e-13 78.2 126 46.0
Sc26g0000470 Simmondsia chinensis HOM05D001494 ORTHO05D001364 3.5e-12 75.5 145 44.1
TAR374G0533 Trochodendron aralioides HOM05D001494 ORTHO05D001364 4.6e-12 75.1 71 62.0
A10p00750 Brassica napus HOM05D001494 ORTHO05D001364 6.0e-12 74.7 123 52.0
Hund27158 Selenicereus undatus HOM05D001494 ORTHO05D001364 2.3e-11 72.8 144 46.5
Aa31LG1G10530 Aethionema arabicum HOM05D001494 ORTHO05D001364 3.9e-11 72.0 101 49.5
Dinv34249 Davidia involucrata HOM05D001494 ORTHO05D001364 8.7e-11 70.9 136 46.3
MD07G1157200 Malus domestica HOM05D001494 ORTHO05D001364 1.1e-10 70.5 138 42.0
Psat4g217040 Pisum sativum HOM05D001494 ORTHO05D001364 1.1e-10 70.5 145 44.1
CARHR249480 Cardamine hirsuta HOM05D001494 ORTHO05D001364 1.9e-10 69.7 142 47.2
PGR102G3010 Punica granatum HOM05D001494 ORTHO05D001364 1.6e-09 66.6 174 40.2
Glyma.08G221100 Glycine max HOM05D001494 ORTHO05D001364 5.8e-07 58.2 115 39.1
GSVIVG01038626001 Vitis vinifera HOM05D001494 ORTHO05D001364 5.8e-07 58.2 125 43.2
Carub.0006s3587 Capsella rubella HOM05D001494 ORTHO05D001364 1.0e-06 57.4 142 43.7
MD07G1157100 Malus domestica HOM05D001494 ORTHO05D001364 1.3e-06 57.0 138 37.0
PSO765G0010 Papaver somniferum HOM05D001494 ORTHO05D001364 3.8e-06 55.5 144 41.7
PSO349G0314 Papaver somniferum HOM05D001494 ORTHO05D001364 6.5e-06 54.7 147 40.8
AT1G01160 Arabidopsis thaliana HOM05D001494 ORTHO05D001364 8.4e-06 54.3 117 42.7


User provided reference genes

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