Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 1.8e-48 195.7 106 100.0
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 7.2e-45 183.7 103 95.1
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 2.1e-44 182.2 105 92.4
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 8.0e-44 180.3 105 90.5
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 4.3e-37 157.9 104 77.9
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 5.6e-37 157.5 102 79.4
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 9.5e-37 156.8 102 77.5
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 1.2e-36 156.4 104 76.9
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.6e-36 156.0 104 76.0
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 1.8e-35 152.5 103 76.7
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 2.3e-35 152.1 104 75.0
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 4.0e-35 151.4 101 77.2
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 6.8e-35 150.6 101 76.2
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 8.9e-35 150.2 104 75.0
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.2e-34 149.8 106 71.7
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 1.5e-34 149.4 104 71.2
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 1.5e-34 149.4 101 77.2
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 2.0e-34 149.1 101 76.2
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 2.6e-34 148.7 103 72.8
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 3.4e-34 148.3 106 73.6
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 3.4e-34 148.3 104 74.0
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 3.4e-34 148.3 104 75.0
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 4.4e-34 147.9 104 74.0
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.7e-33 146.0 104 71.2
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 2.2e-33 145.6 103 71.8
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 2.9e-33 145.2 102 75.5
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 2.9e-33 145.2 101 73.3
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.7e-33 144.8 98 74.5
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 4.9e-33 144.4 102 72.5
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 4.9e-33 144.4 104 75.0
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 8.3e-33 143.7 102 71.6
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 8.3e-33 143.7 103 72.8
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 1.1e-32 143.3 103 70.9
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 1.1e-32 143.3 103 69.9
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.4e-32 142.9 103 69.9
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.4e-32 142.9 102 74.5
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 3.2e-32 141.7 100 75.0
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 3.2e-32 141.7 104 73.1
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 3.2e-32 141.7 104 73.1
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 4.1e-32 141.4 99 75.8
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.1e-32 141.4 99 75.8
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 4.1e-32 141.4 102 73.5
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 7.0e-32 140.6 102 70.6
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 7.0e-32 140.6 103 72.8
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.2e-31 139.8 99 74.7
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.2e-31 139.8 99 74.7
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 2.0e-31 139.0 101 71.3
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 2.0e-31 139.0 104 68.3
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 3.5e-31 138.3 103 68.9
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 3.5e-31 138.3 104 68.3
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 3.5e-31 138.3 103 68.9
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 4.6e-31 137.9 103 70.9
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 4.6e-31 137.9 104 67.3
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 4.6e-31 137.9 102 68.6
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 5.9e-31 137.5 103 68.9
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 5.9e-31 137.5 99 73.7
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 7.8e-31 137.1 103 68.0
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 1.3e-30 136.3 103 69.9
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.7e-30 136.0 103 68.0
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.7e-30 136.0 103 68.0
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.7e-30 136.0 103 68.0
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.7e-30 136.0 103 68.0
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 1.7e-30 136.0 106 67.9
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 3.0e-30 135.2 105 69.5
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 3.0e-30 135.2 105 69.5
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 3.0e-30 135.2 105 70.5
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 3.9e-30 134.8 102 67.6
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 3.9e-30 134.8 100 67.0
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 3.9e-30 134.8 105 67.6
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 3.9e-30 134.8 104 66.3
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 3.9e-30 134.8 105 69.5
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 5.0e-30 134.4 102 69.6
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 5.0e-30 134.4 107 68.2
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 1.9e-29 132.5 100 68.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 1.9e-29 132.5 100 68.0
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 2.5e-29 132.1 101 66.3
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 2.5e-29 132.1 98 70.4
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 3.3e-29 131.7 105 64.8
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 3.3e-29 131.7 100 67.0
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 3.3e-29 131.7 100 68.0
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 5.6e-29 131.0 103 67.0
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 5.6e-29 131.0 102 65.7
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 5.6e-29 131.0 100 67.0
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 7.3e-29 130.6 105 68.6
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 2.1e-28 129.0 103 65.0
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.1e-28 129.0 100 66.0
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 2.1e-28 129.0 100 66.0
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 2.8e-28 128.6 105 67.6
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 3.6e-28 128.3 102 66.7
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 4.7e-28 127.9 104 65.4
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 8.0e-28 127.1 102 66.7
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 8.0e-28 127.1 105 66.7
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 8.0e-28 127.1 100 66.0
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 1.0e-27 126.7 100 67.0
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.4e-27 126.3 105 64.8
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 1.4e-27 126.3 117 61.5
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 4.0e-27 124.8 105 65.7
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 3.7e-25 118.2 103 60.2
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 8.3e-25 117.1 80 76.2
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 1.1e-24 116.7 80 77.5
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 3.2e-24 115.2 98 61.2
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 1.2e-23 113.2 79 77.2
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 2.7e-23 112.1 154 48.1
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 6.0e-23 110.9 81 70.4
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 6.0e-23 110.9 103 58.3
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.7e-22 109.4 85 70.6
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 1.7e-22 109.4 103 59.2
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 6.6e-22 107.5 76 72.4
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 8.6e-22 107.1 78 70.5
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.2e-20 103.2 177 39.5
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 3.6e-20 101.7 103 54.4
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 3.1e-19 98.6 95 58.9
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 5.2e-19 97.8 80 65.0
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 1.2e-18 96.7 79 65.8
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 2.0e-18 95.9 74 66.2
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 4.9e-17 91.3 76 67.1
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 6.4e-17 90.9 74 63.5
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 7.1e-16 87.4 103 47.6
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 9.2e-16 87.0 80 58.8
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 1.7e-14 82.8 92 51.1
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 7.3e-13 77.4 101 45.5
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 7.6e-10 67.4 70 51.4
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 7.6e-10 67.4 70 51.4
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 2.4e-08 62.4 54 66.7
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 2.1e-07 59.3 92 40.2
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 4.6e-07 58.2 77 41.6


User provided reference genes

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