Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019610 Sechium edule HOM05D014519 ORTHO05D006336 4.4e-83 311.2 156 100.0
ClCG04G011480 Citrullus lanatus HOM05D014519 ORTHO05D006336 3.6e-32 142.1 153 56.2
ClCG04G011470 Citrullus lanatus HOM05D014519 ORTHO05D006336 4.8e-29 131.7 133 54.1
Sed0012100 Sechium edule HOM05D014519 ORTHO05D006336 7.0e-20 101.3 129 46.5
Sed0003907 Sechium edule HOM05D014519 ORTHO05D006336 9.1e-20 100.9 116 49.1
CsaV3_1G006320 Cucumis sativus L. HOM05D014519 ORTHO05D006336 1.4e-17 93.6 90 53.3
ClCG04G011490 Citrullus lanatus HOM05D014519 ORTHO05D006336 1.6e-16 90.1 103 47.6
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 4.2e-09 65.5 112 36.6
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 5.5e-09 65.1 104 37.5
CsaV3_3G044280 Cucumis sativus L. HOM05D014519 ORTHO05D006336 7.2e-09 64.7 103 40.8
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 9.4e-09 64.3 104 37.5
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 2.1e-08 63.2 123 31.7
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 2.1e-08 63.2 119 37.8
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 2.7e-08 62.8 104 36.5
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.7e-08 62.8 104 36.5
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.7e-08 62.8 104 36.5
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 2.7e-08 62.8 103 35.0
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 3.6e-08 62.4 103 37.9
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 4.7e-08 62.0 101 36.6
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 6.1e-08 61.6 104 36.5
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 6.1e-08 61.6 104 36.5
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 6.1e-08 61.6 104 36.5
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 1.0e-07 60.8 88 39.8
Sed0001334 Sechium edule HOM05D014519 ORTHO05D006336 2.3e-07 59.7 114 35.1
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 3.0e-07 59.3 129 32.6
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 1.2e-06 57.4 114 34.2
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 1.5e-06 57.0 121 36.4
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.7e-06 55.1 100 30.0


User provided reference genes

Program Settings