Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019554 Sechium edule HOM05D005726 ORTHO05D001733 6.1e-67 257.3 126 100.0
Sed0014638 Sechium edule HOM05D005726 ORTHO05D001733 1.4e-55 219.5 126 84.9
ClCG02G011420 Citrullus lanatus HOM05D005726 ORTHO05D001733 2.0e-49 199.1 127 78.0
MELO3C020779.2 Cucumis melo HOM05D005726 ORTHO05D001733 2.4e-39 165.6 129 70.5
CsaV3_2G015680 Cucumis sativus L. HOM05D005726 ORTHO05D001733 4.3e-36 154.8 129 67.4
Atru.chr5.3224 Acer truncatum HOM05D005726 ORTHO05D001733 5.8e-33 144.4 126 54.8
Haze_02200 Corylus avellana HOM05D005726 ORTHO05D001733 5.8e-33 144.4 126 56.3
Duzib132G0889 Durio zibethinus HOM05D005726 ORTHO05D001733 5.8e-33 144.4 126 54.0
Potri.009G129301 Populus trichocarpa HOM05D005726 ORTHO05D001733 9.9e-33 143.7 127 55.1
Cfa005182 Carpinus fangiana HOM05D005726 ORTHO05D001733 2.9e-32 142.1 126 55.6
RcHm_v2.0_Chr6g0245271 Rosa chinensis HOM05D005726 ORTHO05D001733 3.7e-32 141.7 130 54.6
Cpa.g.sc37.193 Carica papaya HOM05D005726 ORTHO05D001733 8.4e-32 140.6 125 53.6
Potri.004G167800 Populus trichocarpa HOM05D005726 ORTHO05D001733 8.4e-32 140.6 127 53.5
COL.COLO4_17253 Corchorus olitorius HOM05D005726 ORTHO05D001733 1.1e-31 140.2 128 53.1
Gohir.A12G039400 Gossypium hirsutum HOM05D005726 ORTHO05D001733 1.9e-31 139.4 127 55.1
Ciclev10029543m.g Citrus clementina HOM05D005726 ORTHO05D001733 1.6e-30 136.3 132 51.5
Gohir.D12G033000 Gossypium hirsutum HOM05D005726 ORTHO05D001733 2.1e-30 136.0 127 54.3
Gorai.008G033800 Gossypium raimondii HOM05D005726 ORTHO05D001733 2.1e-30 136.0 127 54.3
Ciclev10029854m.g Citrus clementina HOM05D005726 ORTHO05D001733 4.6e-30 134.8 132 50.8
QL11p047517 Quercus lobata HOM05D005726 ORTHO05D001733 1.3e-29 133.3 124 55.6
Manes.04G078400 Manihot esculenta HOM05D005726 ORTHO05D001733 1.5e-28 129.8 129 50.4
CiPaw.05G077000 Carya illinoinensis HOM05D005726 ORTHO05D001733 1.9e-28 129.4 126 52.4
Actinidia00594 Actinidia chinensis HOM05D005726 ORTHO05D001733 4.3e-28 128.3 115 53.9
MD10G1118100 Malus domestica HOM05D005726 ORTHO05D001733 9.6e-28 127.1 132 49.2
Thecc.02G067200 Theobroma cacao HOM05D005726 ORTHO05D001733 2.1e-27 125.9 126 48.4
FAN04G1699 Fragaria x ananassa HOM05D005726 ORTHO05D001733 4.7e-27 124.8 128 52.3
Prupe.8G160400 Prunus persica HOM05D005726 ORTHO05D001733 4.0e-26 121.7 135 49.6
Sabra09G0098800 Salix brachista HOM05D005726 ORTHO05D001733 6.8e-26 120.9 111 52.3
Nn1g05896 Nelumbo nucifera HOM05D005726 ORTHO05D001733 1.2e-25 120.2 128 44.5
DCAR_003698 Daucus carota HOM05D005726 ORTHO05D001733 2.0e-25 119.4 129 48.8
Nn5g30142 Nelumbo nucifera HOM05D005726 ORTHO05D001733 2.6e-25 119.0 126 44.4
TAR376G0138 Trochodendron aralioides HOM05D005726 ORTHO05D001733 2.9e-24 115.5 118 46.6
MD05G1115600 Malus domestica HOM05D005726 ORTHO05D001733 4.9e-24 114.8 134 44.8
MBI05_g33718_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 1.4e-23 113.2 126 42.1
PSO170G6562 Papaver somniferum HOM05D005726 ORTHO05D001733 7.1e-23 110.9 141 41.1
TAR625G1501 Trochodendron aralioides HOM05D005726 ORTHO05D001733 4.6e-22 108.2 126 43.7
PGR042G3858 Punica granatum HOM05D005726 ORTHO05D001733 1.0e-21 107.1 143 45.5
MBI05_g46327_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 1.1e-20 103.6 117 42.7
QL02p011637 Quercus lobata HOM05D005726 ORTHO05D001733 4.8e-19 98.2 126 39.7
Migut.N01283 Erythranthe guttata HOM05D005726 ORTHO05D001733 1.1e-18 97.1 134 35.8
CiPaw.07G149600 Carya illinoinensis HOM05D005726 ORTHO05D001733 1.8e-18 96.3 126 37.3
TPR.G38487 Trifolium pratense HOM05D005726 ORTHO05D001733 2.4e-18 95.9 84 51.2
Haze_22635 Corylus avellana HOM05D005726 ORTHO05D001733 6.9e-18 94.4 129 36.4
Eucgr.F00586 Eucalyptus grandis HOM05D005726 ORTHO05D001733 6.9e-18 94.4 125 37.6
Cfa013952 Carpinus fangiana HOM05D005726 ORTHO05D001733 1.5e-17 93.2 129 36.4
Sed0021833 Sechium edule HOM05D005726 ORTHO05D001733 2.6e-17 92.4 134 37.3
Medtr3g117720 Medicago truncatula HOM05D005726 ORTHO05D001733 1.3e-16 90.1 85 48.2
Phvul.009G017000 Phaseolus vulgaris HOM05D005726 ORTHO05D001733 1.7e-16 89.7 135 37.8
Cc02_g16550 Coffea canephora HOM05D005726 ORTHO05D001733 3.8e-16 88.6 126 41.3
Lalb_Chr11g0061921 Lupinus albus HOM05D005726 ORTHO05D001733 6.4e-16 87.8 132 37.9
Manes.05G147300 Manihot esculenta HOM05D005726 ORTHO05D001733 2.4e-15 85.9 125 38.4
PGR031G2508 Punica granatum HOM05D005726 ORTHO05D001733 2.4e-15 85.9 129 37.2
THA.LOC104821582 Tarenaya hassleriana HOM05D005726 ORTHO05D001733 2.4e-15 85.9 138 37.0
Atru.chr13.290 Acer truncatum HOM05D005726 ORTHO05D001733 4.2e-15 85.1 126 34.9
Potri.002G022100 Populus trichocarpa HOM05D005726 ORTHO05D001733 4.2e-15 85.1 126 38.1
BcaB07g31777 Brassica carinata HOM05D005726 ORTHO05D001733 9.3e-15 84.0 130 36.2
BolC9t54179H Brassica oleracea HOM05D005726 ORTHO05D001733 9.3e-15 84.0 130 35.4
BcaC04g23031 Brassica carinata HOM05D005726 ORTHO05D001733 1.6e-14 83.2 130 35.4
C09p12890 Brassica napus HOM05D005726 ORTHO05D001733 1.6e-14 83.2 130 35.4
TWI56G0219 Tripterygium wilfordii HOM05D005726 ORTHO05D001733 1.6e-14 83.2 126 34.1
Sopen04g035070 Solanum pennellii HOM05D005726 ORTHO05D001733 2.7e-14 82.4 132 36.4
VMungo1309G2498 Vigna mungo HOM05D005726 ORTHO05D001733 3.5e-14 82.0 135 35.6
Glyma.04G005451 Glycine max HOM05D005726 ORTHO05D001733 4.6e-14 81.6 91 49.5
PGSC0003DMG400009937 Solanum tuberosum HOM05D005726 ORTHO05D001733 4.6e-14 81.6 132 36.4
ClCG05G018250 Citrullus lanatus HOM05D005726 ORTHO05D001733 7.9e-14 80.9 126 34.9
Ciclev10003161m.g Citrus clementina HOM05D005726 ORTHO05D001733 1.0e-13 80.5 120 37.5
RcHm_v2.0_Chr6g0302871 Rosa chinensis HOM05D005726 ORTHO05D001733 1.7e-13 79.7 124 33.9
Glyma.04G024200 Glycine max HOM05D005726 ORTHO05D001733 3.0e-13 79.0 138 36.2
MD08G1013100 Malus domestica HOM05D005726 ORTHO05D001733 3.9e-13 78.6 127 34.6
AT5G42146 Arabidopsis thaliana HOM05D005726 ORTHO05D001733 8.7e-13 77.4 130 31.5
CsaV3_2G029540 Cucumis sativus L. HOM05D005726 ORTHO05D001733 1.1e-12 77.0 132 36.4
CsaV3_3G045890 Cucumis sativus L. HOM05D005726 ORTHO05D001733 1.1e-12 77.0 126 33.3
Sed0014046 Sechium edule HOM05D005726 ORTHO05D001733 1.1e-12 77.0 118 36.4
Nitab4.5_0002561g0020 Nicotiana tabacum HOM05D005726 ORTHO05D001733 1.5e-12 76.6 128 33.6
CARHR284740 Cardamine hirsuta HOM05D005726 ORTHO05D001733 1.9e-12 76.3 130 32.3
MELO3C003749.2 Cucumis melo HOM05D005726 ORTHO05D001733 2.5e-12 75.9 126 32.5
Gohir.A06G004000 Gossypium hirsutum HOM05D005726 ORTHO05D001733 2.5e-12 75.9 126 32.5
Carub.0008s0720 Capsella rubella HOM05D005726 ORTHO05D001733 3.3e-12 75.5 130 33.1
Gorai.010G004200 Gossypium raimondii HOM05D005726 ORTHO05D001733 3.3e-12 75.5 126 32.5
Thecc.08G044700 Theobroma cacao HOM05D005726 ORTHO05D001733 3.3e-12 75.5 120 31.7
ATR0810G150 Amborella trichopoda HOM05D005726 ORTHO05D001733 7.4e-12 74.3 126 31.0
Gohir.D06G006900 Gossypium hirsutum HOM05D005726 ORTHO05D001733 7.4e-12 74.3 126 31.7
Cfa005180 Carpinus fangiana HOM05D005726 ORTHO05D001733 9.6e-12 73.9 100 45.0
Phvul.009G000100 Phaseolus vulgaris HOM05D005726 ORTHO05D001733 1.6e-11 73.2 79 54.4
Glyma.12G024300 Glycine max HOM05D005726 ORTHO05D001733 3.6e-11 72.0 93 41.9
Oeu027542.1 Olea europaea HOM05D005726 ORTHO05D001733 8.1e-11 70.9 129 28.7
EL10Ac1g02194 Beta vulgaris HOM05D005726 ORTHO05D001733 1.8e-10 69.7 122 31.1
Lsat_1_v5_gn_2_9581 Lactuca sativa HOM05D005726 ORTHO05D001733 1.8e-10 69.7 111 34.2
Ah.11g039720 Amaranthus hybridus HOM05D005726 ORTHO05D001733 5.3e-10 68.2 116 33.6
MBI05_g46324_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 6.9e-10 67.8 124 30.6
CANSAT01G1229 Cannabis sativa HOM05D005726 ORTHO05D001733 9.0e-10 67.4 138 26.1
Lsat_1_v5_gn_8_125861 Lactuca sativa HOM05D005726 ORTHO05D001733 1.5e-09 66.6 73 43.8
Lj4g0016221 Lotus japonicus HOM05D018548 ORTHO05D020752 1.5e-09 66.6 113 37.2
Migut.C00838 Erythranthe guttata HOM05D005726 ORTHO05D001733 3.4e-09 65.5 118 29.7
FvH4_5g34311 Fragaria vesca HOM05D005726 ORTHO05D001733 3.4e-09 65.5 38 71.1
VMungo1127G1792 Vigna mungo HOM05D005726 ORTHO05D001733 7.6e-09 64.3 122 37.7
Prupe.1G365100 Prunus persica HOM05D005726 ORTHO05D001733 1.3e-08 63.5 127 29.1
Ca_18999_v3 Cicer arietinum L. HOM05D005726 ORTHO05D001733 1.1e-07 60.5 54 51.9
Phvul.011G026400 Phaseolus vulgaris HOM05D005726 ORTHO05D001733 2.4e-07 59.3 103 39.8
Lj1g0006182 Lotus japonicus HOM05D005726 ORTHO05D001733 5.5e-07 58.2 107 29.0
Medtr3g113930 Medicago truncatula HOM05D005726 ORTHO05D001733 5.5e-07 58.2 108 34.3
TPR.G34542 Trifolium pratense HOM05D005726 ORTHO05D001733 5.5e-07 58.2 101 34.7
Medtr4g075490 Medicago truncatula HOM05D005726 ORTHO05D001733 1.6e-06 56.6 53 50.9
Phvul.011G178000 Phaseolus vulgaris HOM05D005726 ORTHO05D001733 2.7e-06 55.8 95 42.1
Thhalv10015257m.g Eutrema salsugineum HOM05D005726 ORTHO05D001733 4.6e-06 55.1 120 28.3
Glyma.08G148400 Glycine max HOM05D005726 ORTHO05D001733 4.6e-06 55.1 97 40.2
SHI08068 Sapria himalayana HOM05D005726 ORTHO05D001733 7.9e-06 54.3 103 26.2


User provided reference genes

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