Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 3.6e-52 208.0 106 100.0
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 4.3e-29 131.3 119 63.0
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 4.0e-27 124.8 126 57.9
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 1.2e-10 70.1 97 48.5
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 3.4e-10 68.6 63 60.3
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 4.4e-10 68.2 110 44.5
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 4.4e-10 68.2 93 47.3
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 5.8e-10 67.8 66 51.5
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 5.8e-10 67.8 117 43.6
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 5.8e-10 67.8 85 52.9
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 7.6e-10 67.4 120 45.8
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 1.7e-09 66.2 63 61.9
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.7e-09 66.2 64 57.8
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 2.2e-09 65.9 80 47.5
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 2.2e-09 65.9 98 46.9
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 2.2e-09 65.9 120 45.0
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 4.9e-09 64.7 56 64.3
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 4.9e-09 64.7 63 52.4
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 6.4e-09 64.3 115 42.6
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 8.4e-09 63.9 66 50.0
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 8.4e-09 63.9 107 47.7
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.1e-08 63.5 103 44.7
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 1.1e-08 63.5 107 44.9
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.1e-08 63.5 69 55.1
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 1.1e-08 63.5 98 42.9
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 1.4e-08 63.2 65 49.2
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.4e-08 62.4 103 43.7
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 4.1e-08 61.6 107 45.8
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 5.4e-08 61.2 87 47.1
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 7.1e-08 60.8 96 41.7
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 9.2e-08 60.5 98 39.8
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 9.2e-08 60.5 65 50.8
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.2e-07 60.1 113 41.6
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 1.6e-07 59.7 94 42.6
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.6e-07 59.7 100 46.0
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 2.7e-07 58.9 100 41.0
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 2.7e-07 58.9 66 48.5
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 2.7e-07 58.9 108 41.7
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 4.6e-07 58.2 116 38.8
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 6.0e-07 57.8 98 37.8
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 6.0e-07 57.8 98 37.8
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 6.0e-07 57.8 98 37.8
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 6.0e-07 57.8 95 41.1
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 7.8e-07 57.4 105 40.0
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 7.8e-07 57.4 103 38.8
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.0e-06 57.0 102 41.2
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 1.0e-06 57.0 87 42.5
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 1.3e-06 56.6 100 37.0
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 1.7e-06 56.2 119 38.7
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.3e-06 55.8 98 36.7
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 3.0e-06 55.5 92 41.3
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 3.0e-06 55.5 57 50.9
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 3.0e-06 55.5 64 53.1
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 3.0e-06 55.5 117 36.8
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 3.9e-06 55.1 88 38.6
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 3.9e-06 55.1 87 47.1
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 6.6e-06 54.3 103 38.8
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 6.6e-06 54.3 61 52.5
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 8.6e-06 53.9 67 43.3


User provided reference genes

Program Settings