Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 4.3e-278 960.7 485 100.0
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 1.7e-234 815.8 483 83.6
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 3.2e-233 811.6 483 83.0
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 1.4e-231 806.2 483 82.8
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 7.8e-187 657.5 486 66.5
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 1.3e-186 656.8 497 66.8
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 4.0e-183 645.2 483 67.3
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 9.0e-183 644.0 482 65.4
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 1.4e-180 636.7 485 66.6
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 1.9e-177 626.3 483 65.8
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 2.5e-177 625.9 524 59.5
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 1.1e-175 620.5 483 64.8
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 4.0e-175 618.6 487 64.9
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 2.6e-174 615.9 483 63.6
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 4.9e-173 611.7 483 64.0
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 1.4e-172 610.1 494 63.0
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 7.1e-172 607.8 483 61.7
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 9.3e-172 607.4 483 63.1
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 1.6e-171 606.7 483 62.7
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.5e-171 605.5 483 62.7
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 6.0e-171 604.7 484 62.4
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 6.0e-171 604.7 486 63.6
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 1.3e-170 603.6 507 61.3
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.3e-170 603.6 483 61.3
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 3.9e-170 602.1 483 61.3
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 1.5e-169 600.1 483 63.8
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 4.3e-169 598.6 483 62.9
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 1.6e-168 596.7 484 62.6
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.6e-168 596.7 487 62.8
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 6.2e-168 594.7 484 62.2
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.4e-167 593.6 485 61.4
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 9.0e-167 590.9 489 62.0
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 7.6e-166 587.8 483 60.9
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 8.4e-165 584.3 484 61.2
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 2.4e-164 582.8 484 59.7
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 3.2e-164 582.4 486 60.3
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 1.6e-163 580.1 486 59.1
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 1.3e-162 577.0 486 59.9
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 1.3e-162 577.0 488 60.5
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 1.8e-162 576.6 488 60.7
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 1.8e-162 576.6 484 61.2
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 3.9e-162 575.5 483 59.8
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 5.1e-162 575.1 521 57.8
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 1.1e-161 573.9 485 62.3
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 3.3e-161 572.4 488 59.8
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 3.3e-161 572.4 487 60.0
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 4.3e-161 572.0 486 60.7
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 4.3e-161 572.0 485 60.2
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 5.6e-161 571.6 486 59.7
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 7.4e-161 571.2 485 59.6
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 9.6e-161 570.9 486 59.5
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 3.7e-160 568.9 484 60.3
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 8.2e-160 567.8 485 59.8
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 1.8e-159 566.6 491 59.7
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 5.3e-159 565.1 483 58.6
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 9.0e-159 564.3 486 59.1
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.6e-158 562.8 485 60.4
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 3.4e-158 562.4 489 60.1
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 5.8e-158 561.6 517 56.9
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 7.6e-158 561.2 488 59.6
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.3e-157 560.5 484 58.9
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 1.7e-157 560.1 488 57.8
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 2.9e-157 559.3 494 59.1
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 6.5e-157 558.1 484 58.5
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 8.4e-157 557.8 485 59.0
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 5.5e-156 555.1 485 58.8
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 5.5e-156 555.1 491 57.4
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 7.1e-156 554.7 442 64.5
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 7.1e-156 554.7 485 59.0
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 7.1e-156 554.7 485 59.0
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 3.5e-155 552.4 485 59.4
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 3.5e-155 552.4 485 57.5
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 7.9e-155 551.2 485 57.9
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 1.0e-154 550.8 483 57.8
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 1.3e-154 550.4 526 55.3
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 3.0e-154 549.3 466 62.0
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 3.3e-153 545.8 486 57.8
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 2.2e-152 543.1 485 58.8
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 5.3e-151 538.5 484 57.0
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 1.5e-150 537.0 485 56.9
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 1.5e-150 537.0 484 56.6
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 1.1e-148 530.8 556 52.3
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 1.4e-148 530.4 452 60.0
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 2.5e-148 529.6 486 57.0
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 4.2e-148 528.9 478 55.4
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 2.1e-147 526.6 420 64.5
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.1e-145 520.8 455 58.7
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 2.4e-143 513.1 396 66.2
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 1.9e-140 503.4 488 52.7
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 1.2e-139 500.7 483 55.1
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 6.1e-139 498.4 508 54.7
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.3e-138 496.5 565 48.3
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 5.7e-137 491.9 510 52.7
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 5.3e-127 458.8 471 50.1
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 7.7e-126 454.9 462 54.3
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 4.7e-123 445.7 488 48.8
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 1.4e-122 444.1 386 59.1
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 4.5e-118 429.1 508 46.7
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 2.1e-115 420.2 348 60.6
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 1.9e-108 397.1 339 60.8
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 2.5e-100 370.2 496 41.5
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 2.6e-97 360.1 325 59.1
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 7.8e-94 348.6 500 42.4
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 9.8e-89 331.6 454 43.4
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.0e-85 320.1 350 50.0
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 1.6e-83 314.3 346 47.1
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 3.6e-83 313.2 359 46.5
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 2.4e-74 283.9 308 51.6
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 6.8e-74 282.3 411 44.0
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 5.8e-65 252.7 288 48.3
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 1.7e-64 251.1 376 43.1
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 3.8e-64 250.0 168 71.4
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 7.1e-63 245.7 210 57.6
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 6.0e-62 242.7 446 35.9
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 9.6e-60 235.3 363 41.3
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.4e-56 222.6 165 65.5
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 1.3e-53 214.9 526 31.2
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 9.3e-47 192.2 137 67.2
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 1.6e-43 181.4 136 64.7
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.3e-40 171.8 122 68.9
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.3e-40 171.8 122 68.9
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.7e-30 137.5 192 42.7
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 8.8e-29 132.5 483 28.6
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 5.9e-25 119.8 223 37.7
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 3.9e-21 107.1 116 46.6
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 2.4e-18 97.8 61 73.8
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 2.4e-18 97.8 61 73.8
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.1e-14 84.7 65 61.5
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 1.1e-12 79.0 65 56.9
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 5.3e-10 70.1 136 36.0
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 4.5e-09 67.0 56 51.8
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 1.3e-08 65.5 32 78.1
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.0e-08 63.5 32 75.0
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.5e-07 60.1 29 79.3


User provided reference genes

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