Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019418 Sechium edule HOM05D003146 ORTHO05D001819 9.0e-102 373.6 194 100.0
MELO3C021270.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.6e-51 204.9 192 55.7
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.6e-42 176.8 159 54.1
CsaV3_6G022340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.5e-40 167.9 155 51.6
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.5e-27 124.4 168 39.9
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.6e-26 123.6 168 39.9
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.6e-26 123.6 168 39.9
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.1e-26 123.2 168 40.5
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.8e-26 122.9 168 39.9
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.8e-26 122.9 168 41.1
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.2e-26 121.7 168 39.9
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.0e-25 119.0 168 38.1
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.0e-25 119.0 168 41.1
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.6e-24 116.3 167 39.5
MELO3C030077.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.6e-24 116.3 168 39.9
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.4e-24 115.5 168 40.5
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.6e-24 114.8 168 38.1
ClCG07G004740 Citrullus lanatus HOM05D003146 ORTHO05D001819 9.9e-24 114.4 171 38.0
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-23 114.0 172 43.6
MELO3C030065.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-23 113.6 168 38.1
MELO3C034867.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-23 113.6 168 38.7
MELO3C032509.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-23 113.2 169 38.5
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-23 113.2 168 38.1
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 3.8e-23 112.5 157 38.9
MELO3C000643.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.8e-23 112.5 168 37.5
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.4e-23 111.7 165 38.8
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.4e-23 111.7 163 38.0
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.4e-23 111.3 168 37.5
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.4e-23 111.3 168 38.1
MELO3C027044.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.4e-23 111.3 168 38.1
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.1e-22 110.9 160 38.8
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.1e-22 110.9 160 38.8
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.9e-22 110.2 167 38.3
MELO3C027828.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-22 109.8 164 37.2
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-22 109.8 168 35.7
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.2e-22 109.4 140 42.9
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.4e-22 108.6 161 37.9
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.4e-22 108.6 161 37.9
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 5.4e-22 108.6 177 35.6
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.2e-22 107.8 156 38.5
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.2e-22 107.8 160 38.1
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.2e-22 107.8 160 38.1
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.2e-22 107.8 160 38.1
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.2e-22 107.8 160 38.1
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.2e-22 107.8 160 38.1
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.1e-21 106.7 168 37.5
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.5e-21 105.9 168 36.3
MELO3C027398.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.0e-21 105.1 168 36.9
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.3e-20 104.0 174 35.1
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.3e-20 104.0 165 36.4
MELO3C001272.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.6e-19 98.6 137 40.1
CsaV3_6G021230 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.8e-18 96.3 162 36.4
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 2.8e-18 96.3 146 39.7
MELO3C027589.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.6e-18 95.9 137 40.1
MELO3C028053.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.2e-17 92.0 120 41.7
Sed0025474 Sechium edule HOM05D003146 ORTHO05D001819 1.5e-16 90.5 169 32.5
MELO3C027625.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.2e-14 82.4 119 38.7
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 9.3e-14 81.3 159 32.1
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.7e-13 79.7 150 33.3
CsaV3_6G020170 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.8e-13 78.2 116 37.9
MELO3C028113.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-12 77.4 98 44.9
MELO3C030062.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-12 77.4 109 40.4
Sed0005258 Sechium edule HOM05D003146 ORTHO05D001819 1.7e-12 77.0 137 37.2
CsaV3_6G021250 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.6e-12 75.1 136 36.0
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 6.6e-12 75.1 146 30.8
MELO3C027826.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-11 74.3 85 45.9
CsaV3_6G020220 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.9e-11 73.6 122 36.9
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 2.5e-11 73.2 146 30.1
CsaV3_6G020190 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.3e-11 72.8 144 33.3
MELO3C034826.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.1e-10 70.1 88 38.6
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 8.1e-10 68.2 163 30.1
CsaV3_UNG044260 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.9e-09 65.1 92 34.8
CsaV3_UNG083670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.9e-09 65.1 92 34.8
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 6.9e-09 65.1 163 29.4
Medtr8g032810 Medicago truncatula HOM05D007995 ORTHO05D001819 1.2e-08 64.3 174 30.5
MELO3C027811.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.0e-08 63.5 83 37.3
MELO3C028207.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.0e-08 63.5 101 35.6
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 3.4e-08 62.8 174 28.2
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 5.8e-08 62.0 168 28.6
TWI09G0328 Tripterygium wilfordii HOM05D026721 ORTHO05D001819 3.8e-07 59.3 173 28.9
MELO3C001749.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-06 57.8 88 38.6
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 1.1e-06 57.8 173 27.7
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 2.4e-06 56.6 177 27.7
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 3.2e-06 56.2 177 27.7
BcaB04g20850 Brassica carinata HOM05D003146 ORTHO05D001819 3.2e-06 56.2 168 25.6
DCAR_030435 Daucus carota HOM05D003146 ORTHO05D001819 3.2e-06 56.2 155 26.5
TWI09G1301 Tripterygium wilfordii HOM05D026721 ORTHO05D001819 3.2e-06 56.2 132 26.5
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 4.2e-06 55.8 176 27.3
MELO3C034823.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.2e-06 55.8 81 40.7


User provided reference genes

Program Settings