Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.4e-93 346.3 175 100.0
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 2.9e-75 285.4 175 83.4
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 2.2e-70 269.2 176 79.5
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 1.2e-68 263.5 174 79.3
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 5.4e-45 184.9 176 58.0
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 4.5e-44 181.8 176 59.7
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.3e-43 180.3 174 54.0
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 2.3e-43 179.5 174 54.0
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 3.8e-43 178.7 156 60.9
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 6.6e-43 177.9 153 59.5
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 1.9e-42 176.4 172 54.7
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.9e-42 176.4 150 58.7
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 3.3e-42 175.6 175 54.3
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 3.3e-42 175.6 159 59.7
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 7.2e-42 174.5 152 60.5
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 7.2e-42 174.5 150 59.3
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 9.5e-42 174.1 176 55.1
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.6e-41 173.3 152 58.6
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 2.1e-41 172.9 151 59.6
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 2.1e-41 172.9 151 60.9
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 2.8e-41 172.6 176 54.0
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 3.6e-41 172.2 151 58.9
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.6e-41 172.2 177 53.7
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.6e-41 172.2 152 59.2
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 3.6e-41 172.2 152 59.2
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 4.7e-41 171.8 171 54.4
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 8.0e-41 171.0 147 59.2
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 8.0e-41 171.0 152 58.6
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 1.0e-40 170.6 161 57.8
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 1.4e-40 170.2 178 55.6
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 5.2e-40 168.3 161 57.1
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 5.2e-40 168.3 151 58.3
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 1.2e-39 167.2 177 52.5
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 2.0e-39 166.4 165 57.0
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 2.6e-39 166.0 148 56.8
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 3.4e-39 165.6 174 52.9
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 4.4e-39 165.2 161 57.8
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 4.4e-39 165.2 176 52.8
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 5.7e-39 164.9 164 54.3
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 7.5e-39 164.5 176 52.3
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 9.8e-39 164.1 149 58.4
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 9.8e-39 164.1 159 58.5
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 9.8e-39 164.1 153 55.6
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.3e-38 163.7 158 58.2
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 2.2e-38 162.9 163 52.8
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 4.9e-38 161.8 178 50.6
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 6.4e-38 161.4 151 55.0
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 8.3e-38 161.0 178 51.7
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 1.4e-37 160.2 150 55.3
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 1.8e-37 159.8 147 57.1
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 4.1e-37 158.7 158 55.1
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 5.4e-37 158.3 159 56.6
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.2e-36 157.1 163 52.8
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.2e-36 157.1 179 48.0
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.6e-36 156.8 155 56.8
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 2.0e-36 156.4 149 52.3
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 2.0e-36 156.4 156 55.1
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 2.7e-36 156.0 150 61.3
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.7e-36 156.0 174 51.1
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 3.5e-36 155.6 159 52.8
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 3.5e-36 155.6 180 51.7
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 4.6e-36 155.2 133 57.9
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 4.6e-36 155.2 151 55.6
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.9e-36 154.8 144 55.6
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.9e-36 154.8 144 55.6
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 7.8e-36 154.5 148 53.4
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.3e-35 153.7 147 54.4
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.7e-35 153.3 171 52.6
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 2.3e-35 152.9 149 54.4
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 2.9e-35 152.5 145 55.2
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 2.9e-35 152.5 145 55.2
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 2.9e-35 152.5 144 56.9
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 2.9e-35 152.5 153 52.9
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 6.6e-35 151.4 153 54.2
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 8.6e-35 151.0 140 54.3
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 1.1e-34 150.6 144 55.6
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 2.5e-34 149.4 153 54.2
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 4.3e-34 148.7 145 53.8
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 5.6e-34 148.3 145 53.8
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 5.6e-34 148.3 145 53.8
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.2e-33 147.1 173 48.6
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 4.7e-33 145.2 186 43.5
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 8.0e-33 144.4 140 52.1
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 1.8e-32 143.3 147 55.8
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 6.8e-32 141.4 150 48.7
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 8.9e-32 141.0 147 55.1
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 1.2e-31 140.6 157 52.2
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 2.0e-31 139.8 179 43.0
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.6e-31 139.4 183 43.2
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 3.4e-31 139.0 149 54.4
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 4.4e-31 138.7 133 54.9
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 7.5e-31 137.9 140 55.7
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.3e-30 137.1 147 53.1
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 4.9e-30 135.2 130 57.7
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.1e-29 134.0 140 51.4
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 4.1e-29 132.1 116 56.9
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 2.0e-28 129.8 143 53.1
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 6.0e-28 128.3 155 43.2
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.0e-27 125.9 150 50.0
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 3.9e-27 125.6 153 49.7
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.5e-26 122.9 123 53.7
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 7.3e-26 121.3 113 55.8
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 2.8e-25 119.4 119 54.6
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.4e-21 105.1 110 47.3
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.6e-20 103.6 136 44.9
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 5.6e-18 95.1 100 50.0
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.2e-17 94.0 88 50.0
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 1.4e-16 90.5 73 57.5
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 1.7e-14 83.6 176 33.5
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 3.0e-11 72.8 70 55.7
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 4.3e-10 68.9 181 29.8
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.1e-09 66.6 73 45.2
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 4.9e-06 55.5 36 61.1


User provided reference genes

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