Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 1.6e-136 489.6 278 100.0
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 2.6e-102 375.9 277 71.8
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 4.2e-100 368.6 231 81.0
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 7.6e-94 347.8 257 72.0
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 3.7e-80 302.4 261 59.4
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 6.2e-80 301.6 258 60.1
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 6.9e-79 298.1 202 70.8
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 3.4e-78 295.8 214 68.2
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 4.5e-78 295.4 241 64.7
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 1.7e-77 293.5 214 68.7
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.1e-76 290.8 202 69.3
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 2.5e-76 289.7 201 69.2
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 1.2e-75 287.3 201 68.7
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 2.7e-75 286.2 201 71.6
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.0e-74 284.3 201 68.2
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 1.3e-74 283.9 224 65.6
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 2.3e-74 283.1 218 64.7
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 5.1e-74 282.0 214 67.8
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 2.5e-73 279.6 224 64.3
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 2.5e-73 279.6 275 55.6
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 9.7e-73 277.7 217 62.2
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 1.6e-72 276.9 216 64.8
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.8e-72 276.2 211 64.9
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.8e-72 276.2 211 64.5
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 2.8e-72 276.2 237 59.1
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 4.8e-72 275.4 217 64.1
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 8.2e-72 274.6 214 64.5
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 1.8e-71 273.5 201 67.2
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.8e-71 273.5 220 62.7
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 3.1e-71 272.7 206 64.6
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 4.1e-71 272.3 212 61.8
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 4.1e-71 272.3 237 58.6
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 4.1e-71 272.3 214 63.1
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 6.9e-71 271.6 230 60.0
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 9.0e-71 271.2 235 59.1
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 9.0e-71 271.2 202 63.4
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 1.2e-70 270.8 208 65.9
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 1.5e-70 270.4 222 62.2
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 3.4e-70 269.2 231 59.3
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 3.4e-70 269.2 204 67.2
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 7.7e-70 268.1 226 59.7
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 7.7e-70 268.1 218 61.9
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 7.7e-70 268.1 206 66.0
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 1.0e-69 267.7 225 58.7
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.2e-69 266.5 251 55.8
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 2.9e-69 266.2 226 59.3
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 2.9e-69 266.2 211 61.6
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 6.5e-69 265.0 215 61.4
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 6.5e-69 265.0 222 61.3
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 8.5e-69 264.6 224 60.7
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 8.5e-69 264.6 224 61.2
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.1e-68 264.2 189 68.3
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 1.1e-68 264.2 198 66.7
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 1.4e-68 263.8 208 62.0
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 1.9e-68 263.5 220 60.5
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 3.2e-68 262.7 204 61.8
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 9.4e-68 261.2 206 63.6
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 1.2e-67 260.8 213 60.6
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 1.2e-67 260.8 200 65.0
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 1.2e-67 260.8 209 61.7
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 1.2e-67 260.8 213 61.0
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 2.1e-67 260.0 213 61.0
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 2.1e-67 260.0 213 61.0
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 2.7e-67 259.6 208 63.5
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 4.6e-67 258.8 209 61.7
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 6.1e-67 258.5 272 51.8
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.8e-66 256.9 200 63.5
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 3.9e-66 255.8 229 59.8
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 1.1e-65 254.2 221 59.7
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 1.7e-64 250.4 216 62.0
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 2.2e-64 250.0 215 59.5
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 3.7e-64 249.2 183 66.1
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 6.3e-64 248.4 200 60.0
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 8.2e-64 248.1 202 59.9
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 8.2e-64 248.1 215 54.4
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 8.2e-64 248.1 215 58.1
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 1.1e-63 247.7 204 59.8
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 2.4e-63 246.5 211 56.4
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 3.1e-63 246.1 227 57.7
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 5.3e-63 245.4 204 58.8
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 1.5e-62 243.8 199 61.3
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 1.1e-60 237.7 189 61.9
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 3.2e-60 236.1 173 69.4
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 4.7e-59 232.3 183 62.3
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 3.0e-58 229.6 199 56.3
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 6.7e-58 228.4 188 61.7
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 9.7e-57 224.6 218 54.6
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 2.2e-56 223.4 193 63.7
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 1.4e-55 220.7 185 60.5
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 7.0e-55 218.4 209 50.2
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.2e-54 217.6 172 64.0
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 2.0e-54 216.9 177 62.7
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 2.5e-52 209.9 202 53.0
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 1.6e-51 207.2 225 50.2
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 1.0e-50 204.5 176 61.4
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 2.6e-49 199.9 178 56.2
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 2.8e-48 196.4 199 49.2
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 2.5e-44 183.3 173 50.9
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 3.2e-44 183.0 208 47.1
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.6e-43 180.6 167 55.1
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.8e-39 167.2 142 59.9
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 2.2e-37 160.2 197 41.6
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 8.5e-37 158.3 192 44.3
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 2.1e-35 153.7 119 64.7
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 1.0e-34 151.4 83 86.7
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 1.4e-34 151.0 183 43.2
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 1.8e-34 150.6 118 63.6
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 2.3e-34 150.2 83 86.7
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.0e-33 147.1 230 44.3
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 7.5e-33 145.2 83 79.5
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 7.5e-33 145.2 216 38.4
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.4e-31 140.2 258 39.9
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.7e-29 134.0 101 64.4
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 2.3e-29 133.7 167 41.3
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 3.8e-29 132.9 132 54.5
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 2.5e-28 130.2 141 52.5
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 8.0e-27 125.2 93 63.4
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.8e-26 124.0 216 34.3
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 3.4e-25 119.8 101 60.4
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 6.3e-24 115.5 151 43.7
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.6e-19 100.9 186 43.0
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 2.2e-16 90.5 60 65.0
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 1.3e-08 64.7 164 31.1
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 2.9e-08 63.5 51 56.9
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 3.7e-08 63.2 50 56.0


User provided reference genes

Program Settings